FFCP PHASE1:Hg19::chr5:52096203..52096214,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:52096203..52096214,+
|short_description=p8@PELO
|description=CAGE_peak_8_at_PELO_5end
|association_with_transcript=-12bp_to_DQ892950,DQ896198_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=53918 | |EntrezGene=53918 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8829 | |HGNC=8829 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_DQ892950,DQ896198_5end | |||
|cluster_id=chr5:52096203..52096214,+ | |||
|description=CAGE_peak_8_at_PELO_5end | |||
|id=chr5:52096203..52096214,+ | |||
|ontology_enrichment_celltype=CL:0000222!6.53e-15!119;CL:0000183!2.46e-11!59;CL:0000192!9.24e-10!42;CL:0000514!9.24e-10!42;CL:0000680!9.52e-10!57;CL:0000056!9.52e-10!57;CL:0000355!9.52e-10!57;CL:0000187!2.55e-09!54;CL:0000393!3.69e-09!60;CL:0000211!3.69e-09!60;CL:0000220!1.94e-07!246;CL:0000213!2.07e-07!57;CL:0000215!2.07e-07!57;CL:0002321!2.87e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000192;9.89e-12;43!CL:0000359;3.96e-11;32!CL:0000115;3.88e-09;36!CL:0002504;4.27e-09;3!CL:1000279;4.27e-09;3!CL:1000280;4.27e-09;3!CL:0002195;8.56e-07;2!CL:0002571;8.56e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.92e-19,121;CL:0000192,9.76e-16,43;CL:0000514,9.76e-16,43;CL:0000680,4.71e-13,58;CL:0000056,4.71e-13,58;CL:0000355,4.71e-13,58;CL:0000187,1.31e-12,55;CL:0000359,2.23e-11,32;CL:0000393,7.30e-11,61;CL:0000211,7.30e-11,61;CL:0000115,1.62e-10,36;CL:0002504,3.81e-09,3;CL:1000279,3.81e-09,3;CL:1000280,3.81e-09,3;CL:0000213,3.59e-08,58;CL:0000215,3.59e-08,58;CL:0002078,9.63e-08,45;CL:0002321,6.10e-07,250;CL:0002195,8.55e-07,2;CL:0002571,8.55e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;9.89e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004573;6.42e-10;33!UBERON:0004571;6.42e-10;33!UBERON:0001637;6.69e-10;42!UBERON:0003509;6.69e-10;42!UBERON:0004572;6.69e-10;42!UBERON:0000055;1.90e-09;65!UBERON:0001135;2.40e-09;15!UBERON:0003513;4.63e-09;7!UBERON:0007500;6.45e-09;56!UBERON:0001981;6.45e-09;56!UBERON:0004537;6.45e-09;56!UBERON:0002049;2.02e-08;75!UBERON:0007798;2.02e-08;75!UBERON:0003914;3.55e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,1.93e-21,78;UBERON:0007798,1.93e-21,78;UBERON:0000055,9.45e-19,68;UBERON:0000490,3.92e-16,148;UBERON:0007500,2.24e-15,59;UBERON:0001981,2.24e-15,59;UBERON:0004537,2.24e-15,59;UBERON:0006965,2.24e-15,59;UBERON:0003914,5.11e-15,117;UBERON:0004535,4.60e-14,109;UBERON:0004872,1.08e-13,83;UBERON:0001637,1.13e-13,42;UBERON:0003509,1.13e-13,42;UBERON:0004572,1.13e-13,42;UBERON:0001009,1.83e-13,112;UBERON:0005256,2.56e-12,122;UBERON:0001134,7.37e-12,62;UBERON:0002036,7.37e-12,62;UBERON:0003082,7.37e-12,62;UBERON:0007503,9.95e-12,78;UBERON:0002385,2.55e-11,64;UBERON:0001015,2.55e-11,64;UBERON:0000383,2.55e-11,64;UBERON:0004573,7.99e-11,33;UBERON:0004571,7.99e-11,33;UBERON:0003104,1.53e-10,160;UBERON:0009142,1.53e-10,160;UBERON:0002329,1.11e-09,71;UBERON:0003059,1.11e-09,71;UBERON:0007282,1.11e-09,71;UBERON:0004290,1.11e-09,71;UBERON:0009618,1.11e-09,71;UBERON:0003077,1.78e-09,72;UBERON:0007285,1.78e-09,72;UBERON:0003513,2.07e-09,7;UBERON:0001135,2.15e-09,15;UBERON:0002100,2.43e-09,199;UBERON:0007524,2.82e-09,73;UBERON:0000119,3.24e-08,309;UBERON:0000483,7.09e-08,306;UBERON:0000486,1.49e-07,83;UBERON:0005172,5.39e-07,54;UBERON:0005173,5.39e-07,54 | |||
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| ||
|short_description=p8@PELO | |||
}} | }} |
Latest revision as of 02:25, 18 September 2015
Short description: | p8@PELO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PELO_5end |
Coexpression cluster: | NA |
Association with transcript: | -12bp_to_DQ892950, DQ896198_5end |
EntrezGene: | PELO |
HGNC: | 8829 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.92e-19 | 121 |
smooth muscle cell | 9.76e-16 | 43 |
smooth muscle myoblast | 9.76e-16 | 43 |
muscle precursor cell | 4.71e-13 | 58 |
myoblast | 4.71e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.71e-13 | 58 |
muscle cell | 1.31e-12 | 55 |
vascular associated smooth muscle cell | 2.23e-11 | 32 |
electrically responsive cell | 7.30e-11 | 61 |
electrically active cell | 7.30e-11 | 61 |
endothelial cell | 1.62e-10 | 36 |
enteric smooth muscle cell | 3.81e-09 | 3 |
smooth muscle cell of large intestine | 3.81e-09 | 3 |
smooth muscle cell of colon | 3.81e-09 | 3 |
lining cell | 3.59e-08 | 58 |
barrier cell | 3.59e-08 | 58 |
meso-epithelial cell | 9.63e-08 | 45 |
embryonic cell | 6.10e-07 | 250 |
hepatic stem cell | 8.55e-07 | 2 |
hepatic mesenchymal stem cell | 8.55e-07 | 2 |