FFCP PHASE1:Hg19::chr6:10415484..10415508,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:10415484..10415508,-
|short_description=p3@TFAP2A
|description=CAGE_peak_3_at_TFAP2A_5end
|association_with_transcript=-3bp_to_ENST00000379613_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7020 | |EntrezGene=7020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11742 | |HGNC=11742 | ||
|TSSclassifier=strong | |||
|UniProt=P05549 | |UniProt=P05549 | ||
|association_with_transcript=-3bp_to_ENST00000379613_5end | |||
|cluster_id=chr6:10415484..10415508,- | |||
|description=CAGE_peak_3_at_TFAP2A_5end | |||
|id=chr6:10415484..10415508,- | |||
|ontology_enrichment_celltype=CL:0000066!1.69e-47!254;CL:0002077!3.05e-14!33;CL:0002076!6.59e-14!43;CL:0000076!2.15e-11!62;CL:0002321!7.17e-10!248;CL:0000220!1.40e-09!246;CL:0000223!2.47e-09!59;CL:0000075!1.04e-08!27;CL:0002159!1.71e-08!13;CL:0000221!2.63e-08!71;CL:0000148!6.84e-08!10;CL:0000541!6.84e-08!10;CL:0002251!1.24e-07!21;CL:0000710!1.68e-07!20;CL:0000150!4.28e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002077;2.21e-15;34!CL:0002076;4.02e-12;42!CL:0000075;1.14e-10;27!CL:0000710;1.41e-09;20!CL:0002159;1.56e-09;14!CL:0000148;1.58e-09;10!CL:0002251;2.98e-09;20!CL:0000150;1.51e-08;9!CL:0000240;5.57e-07;6!CL:0000311;5.57e-07;6!CL:0000079;5.57e-07;6!CL:0000237;5.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.44e-52,253;CL:0002077,1.37e-17,34;CL:0002076,4.29e-16,42;CL:0000076,1.46e-11,63;CL:0000223,6.15e-11,58;CL:0000075,1.09e-10,27;CL:0000710,1.22e-09,20;CL:0000148,1.35e-09,10;CL:0000541,1.35e-09,10;CL:0002159,1.60e-09,14;CL:0002251,2.95e-09,20;CL:0000150,1.37e-08,9;CL:0000240,5.65e-07,6;CL:0000311,5.65e-07,6;CL:0000079,5.65e-07,6;CL:0000237,5.65e-07,6;CL:0000036,5.65e-07,6;CL:0000357,5.65e-07,6;CL:0000114,5.65e-07,6;CL:0002321,6.24e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000357;5.57e-07;6!CL:0000114;5.57e-07;6 | |||
|ontology_enrichment_disease=DOID:0050687!3.37e-28!143;DOID:305!3.20e-24!106;DOID:162!5.75e-15!235;DOID:14566!1.59e-14!239;DOID:1749!8.39e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;8.93e-09;14!DOID:305;1.31e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.71e-30,143;DOID:305,1.32e-25,106;DOID:162,2.03e-16,235;DOID:14566,2.10e-15,239;DOID:1749,1.02e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001004!3.21e-14!72;UBERON:0004119!1.86e-13!169;UBERON:0000925!1.86e-13!169;UBERON:0006595!1.86e-13!169;UBERON:0000065!9.14e-11!53;UBERON:0000077!3.37e-10!130;UBERON:0000072!4.10e-10!46;UBERON:0003102!4.21e-10!95;UBERON:0001007!1.40e-09!155;UBERON:0001555!1.40e-09!155;UBERON:0007026!1.40e-09!155;UBERON:0008947!5.64e-09!38;UBERON:0003258!5.64e-09!38;UBERON:0005631!1.59e-08!14;UBERON:0000158!1.59e-08!14;UBERON:0001041!2.11e-08!98;UBERON:0001737!5.16e-08!9;UBERON:0000166!2.27e-07!21;UBERON:0001557!3.09e-07!19;UBERON:0004921!3.96e-07!129;UBERON:0004185!3.96e-07!129;UBERON:0000161!9.58e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;9.13e-10;9!UBERON:0001557;9.13e-10;9!UBERON:0000072;4.06e-08;37!UBERON:0000161;5.23e-08;19!UBERON:0000166;5.23e-08;19!UBERON:0005631;7.21e-08;10!UBERON:0000158;7.21e-08;10!UBERON:0000065;7.87e-08;44!UBERON:0000165;8.64e-08;28!UBERON:0001004;3.51e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.20e-13,74;UBERON:0004119,5.65e-11,160;UBERON:0000925,5.65e-11,160;UBERON:0006595,5.65e-11,160;UBERON:0005631,2.12e-10,14;UBERON:0000158,2.12e-10,14;UBERON:0001737,9.43e-10,9;UBERON:0000065,1.24e-09,54;UBERON:0000072,7.22e-09,47;UBERON:0008947,1.49e-08,38;UBERON:0003258,1.49e-08,38;UBERON:0003102,2.27e-08,99;UBERON:0000166,3.43e-08,22;UBERON:0001557,2.43e-07,19;UBERON:0000165,2.44e-07,29;UBERON:0000930,2.44e-07,29;UBERON:0001041,2.85e-07,87;UBERON:0001007,4.47e-07,145;UBERON:0001555,4.47e-07,145;UBERON:0007026,4.47e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,20.0966062359758,8.44054330331051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.77408061658038,11.0330546937471,11.1446189947953,14.4204063965047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42159801053347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.589405839739707,28.7793277751108,21.8762821242813,0,0,0,0,0,0,0.198762407366705,0.860234595106124,1.04142150482278,0.56530794192401,1.67799774483962,1.37559020970034,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,12.6467275121335,0,0.25326102332916,1.19168262731897,0.573673241497627,0.709336764396714,2.24271040056923,1.06748995729705,0.49333509683432,0,0.538842688278752,0.163461903113459,0,0,0.468642863667593,0,1.1409436430889,0,0,0,0,0,1.22834317311768,0.206651562351531,0,0,0,0,1.68336113954066,1.7516592782075,0.277064115484183,0,0,0,0.340296549480063,1.07633781413317,0.640672166455702,0.423863802319124,1.80054657650641,0.206105058476878,0.515281080091258,0.37223371266318,1.68776332241266,0.779496041289589,1.51460264546469,0.184099797284599,1.77810662500693,0,0.604512589365842,1.86516651541536,13.7215205745941,19.3649745619493,24.3783906080653,0.609868530647977,1.59035721985782,3.95059405756363,4.87206958572241,4.54177531576131,0,0,0.643240938192885,0,0,0,33.7174380113555,30.1766595239802,33.018511094037,32.757309901521,32.8997960579533,35.5905928666645,26.6965990157126,27.8634480477991,26.5475538293009,0,0,0,0,0,0,0,0,0.122988438543114,0,25.3523159293925,30.3484733795573,17.2909832548005,16.5733316833768,0.977424915930974,0,0,1.27523445472584,0.234817388471643,0,0,0,1.58040879591855,0.858486162094873,0,0,0,10.3107217385455,13.102605999511,19.1396381277222,13.4337784054272,13.9504290486702,14.568541808278,0,0,0,0,0.25248486685276,30.2249976830725,72.1958124305145,62.1252470213249,44.4788359659034,38.9716197345596,30.6349919000796,108.61404439962,0,0,0,1.80980402060889,0,0,1.59562869950922,1.04007436911366,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0.239624855491583,0,0,0,0,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,1.66376689224646,2.85486382075459,3.15404830067869,2.10854546986884,0,0,1.03473071292505,0,0,1.04260337361699,0,0,0,0,0,4.24378600024763,6.65741758041988,12.0956117331872,0,0,0,0,0,0,0,0,0,0,0,0,0.604297247958111,7.81975234182811,28.3609445922561,0,0,0,13.9871880001298,12.630515285124,0.784349769176855,1.46139224653261,4.01096189792928,0,0,0,0,0,0.501689773854853,7.64628819135115,16.6215201785745,3.1342465661105,0,0,0,0,0,11.128429257954,0,0,35.6044633557627,26.6524700874974,0,0,0,0,0,0,0,0.0852266274161009,0,5.78497203763423,11.3392139745413,11.8679822619963,8.80072693443284,0.464845549297286,0.31481234683064,0,0.308033580176089,1.06461206063404,0,0.9266210955196,0.572499546967965,0,0,0,0,0,0.318203247925937,2.35484592059769,0,0,0,0.404364963146632,0,0,0,0,1.05650146756755,0,0.141405431953713,1.13008116620243,2.75682671773062,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0,0.281695602532241,0,0.294747123039363,0,0,0,0.329294892959902,0.75894634753143,0,9.23732282164916,14.7466500617873,13.0669181833587,11.2972560932135,5.59656984472599,16.8471475667626,10.1988935313435,4.82419140434615,0,0,0,0,0,0,0,0,1.6023610669121,0,78.1678288979491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.5326648538822,0,0,0.111443384277478,0,13.6084356300483,12.7694812758035,16.5866779133585,0,0,2.33748280548102,0,1.05562704063997,0.398495976502139,0,0.755798243562828,0.306806047506464,0,0.622079175323615,5.66170612228159,4.83357171624145,0,0.295930216910801,0,0,0,0,0,14.3235268596878,83.7866799963555,5.79999660347835,2.73104275885199,0.762760950878299,13.2377101790044,6.20538071834636,0,0.868124974666461,0,0,0,0.110579259931225,0.295547618953547,0.219385397153973,62.4217395963814,12.9664082179101,1.61595542857974,0,14.7560898808358,0,13.254979374485,16.5880603060598,9.43455212039182,36.2463647692672,0,0,0,0,0,0,0,0,2.53197677433632,6.36607951820676,0,0,0,0,0.611030144933625,0,0,0,0,0,0,0,9.5875663276724,8.74009366322734,3.94584402849391,0,0,0,5.11099626009275,4.66596861287612,13.2930774541437,13.901662146771,14.1269813283251,22.6997616568622,51.2297182853627,5.54698692052555,3.29763502836749,40.470860132138,70.8661941564477,5.59125338374496,0,52.7322005525514,76.3783363550639,43.1927304099881,5.14041787388623,0,11.0730562982461,0,2.78200456384186,0.0633107959558787,54.55883578301,9.21826432892638,0.426905989478705,6.39390750662817,3.74635084600676,0,0,0,0.248505071130865,54.4453219964797,0.951329442515298,0.732219924186332,4.28392514072551,1.44475294950759,0,0,0,7.73577794555923,0,0,0,1.43574604915363,16.5733570414163,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0.482259445395058,0.137539436597234,0.415440338029185,0.674921674654501,5.41661368190565,0,8.38586718998165,1.97014268247995,5.97982304738978,0.844802692155252,4.30289614398828,127.23977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| ||
|short_description=p3@TFAP2A | |||
}} | }} |
Latest revision as of 13:03, 19 September 2015
Short description: | p3@TFAP2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TFAP2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -3bp_to_ENST00000379613_5end |
EntrezGene: | TFAP2A |
HGNC: | 11742 |
UniProt: | P05549 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.44e-52 | 253 |
ecto-epithelial cell | 1.37e-17 | 34 |
endo-epithelial cell | 4.29e-16 | 42 |
squamous epithelial cell | 1.46e-11 | 63 |
endodermal cell | 6.15e-11 | 58 |
columnar/cuboidal epithelial cell | 1.09e-10 | 27 |
neurecto-epithelial cell | 1.22e-09 | 20 |
melanocyte | 1.35e-09 | 10 |
melanoblast | 1.35e-09 | 10 |
general ecto-epithelial cell | 1.60e-09 | 14 |
epithelial cell of alimentary canal | 2.95e-09 | 20 |
glandular epithelial cell | 1.37e-08 | 9 |
stratified squamous epithelial cell | 5.65e-07 | 6 |
keratin accumulating cell | 5.65e-07 | 6 |
stratified epithelial cell | 5.65e-07 | 6 |
keratinizing barrier epithelial cell | 5.65e-07 | 6 |
epithelial fate stem cell | 5.65e-07 | 6 |
stratified epithelial stem cell | 5.65e-07 | 6 |
surface ectodermal cell | 5.65e-07 | 6 |
embryonic cell | 6.24e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
respiratory system | 1.20e-13 | 74 |
endoderm-derived structure | 5.65e-11 | 160 |
endoderm | 5.65e-11 | 160 |
presumptive endoderm | 5.65e-11 | 160 |
extraembryonic membrane | 2.12e-10 | 14 |
membranous layer | 2.12e-10 | 14 |
larynx | 9.43e-10 | 9 |
respiratory tract | 1.24e-09 | 54 |
segment of respiratory tract | 7.22e-09 | 47 |
respiratory primordium | 1.49e-08 | 38 |
endoderm of foregut | 1.49e-08 | 38 |
surface structure | 2.27e-08 | 99 |
oral opening | 3.43e-08 | 22 |
upper respiratory tract | 2.43e-07 | 19 |
mouth | 2.44e-07 | 29 |
stomodeum | 2.44e-07 | 29 |
foregut | 2.85e-07 | 87 |
digestive system | 4.47e-07 | 145 |
digestive tract | 4.47e-07 | 145 |
primitive gut | 4.47e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.71e-30 | 143 |
carcinoma | 1.32e-25 | 106 |
cancer | 2.03e-16 | 235 |
disease of cellular proliferation | 2.10e-15 | 239 |
squamous cell carcinoma | 1.02e-08 | 14 |