FFCP PHASE1:Hg19::chr6:123958068..123958110,-: Difference between revisions
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|id=chr6:123958068..123958110,-
|short_description=p1@TRDN
|description=CAGE_peak_1_at_TRDN_5end
|association_with_transcript=0bp_to_ENST00000265491_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10345 | |EntrezGene=10345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12261 | |HGNC=12261 | ||
|TSSclassifier=strong | |||
|UniProt=E9PDT2 | |UniProt=E9PDT2 | ||
|association_with_transcript=0bp_to_ENST00000265491_5end | |||
|cluster_id=chr6:123958068..123958110,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_TRDN_5end | |||
|id=chr6:123958068..123958110,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
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|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;3.03e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.03e-08,2 | |||
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| ||
|short_description=p1@TRDN | |||
}} | }} |
Latest revision as of 06:17, 20 September 2015
Short description: | p1@TRDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRDN_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000265491_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | E9PDT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 7.59e-34 | 114 |
compound organ | 2.33e-12 | 68 |
cardiac chamber | 9.09e-12 | 3 |
valve | 1.01e-11 | 3 |
cardiac mesenchyme | 1.01e-11 | 3 |
cardial valve | 1.01e-11 | 3 |
tunica intima | 1.01e-11 | 3 |
heart layer | 1.01e-11 | 3 |
endocardium | 1.01e-11 | 3 |
endocardial cushion | 1.01e-11 | 3 |
presumptive endocardium | 1.01e-11 | 3 |
primary circulatory organ | 2.02e-11 | 27 |
spinal cord | 3.40e-10 | 3 |
dorsal region element | 3.40e-10 | 3 |
dorsum | 3.40e-10 | 3 |
structure with developmental contribution from neural crest | 1.45e-09 | 132 |
muscle structure | 1.11e-08 | 2 |
muscle organ | 1.11e-08 | 2 |
throat | 1.97e-08 | 2 |
cardiac atrium | 2.63e-08 | 2 |
future cardiac atrium | 2.63e-08 | 2 |
atrioventricular valve | 2.72e-08 | 2 |
gland of diencephalon | 5.18e-08 | 4 |
neuroendocrine gland | 5.18e-08 | 4 |
open tracheal system trachea | 5.90e-08 | 2 |
pituitary gland | 9.88e-08 | 2 |
major salivary gland | 1.53e-07 | 2 |
posterior neural tube | 4.09e-07 | 15 |
chordal neural plate | 4.09e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.03e-08 | 2 |