FFCP PHASE1:Hg19::chr6:144416694..144416718,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:144416694..144416718,-
|short_description=p1@SF3B5
|description=CAGE_peak_1_at_SF3B5_5end
|association_with_transcript=35bp_to_ENST00000367569,NM_031287,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83443 | |EntrezGene=83443 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21083 | |HGNC=21083 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BWJ5 | |UniProt=Q9BWJ5 | ||
|association_with_transcript=35bp_to_ENST00000367569,NM_031287,uc003qkr.1_5end | |||
|cluster_id=chr6:144416694..144416718,- | |||
|description=CAGE_peak_1_at_SF3B5_5end | |||
|id=chr6:144416694..144416718,- | |||
|ontology_enrichment_celltype=CL:0000144!6.06e-35!625;CL:0002371!1.37e-32!591;CL:0000012!1.72e-32!682;CL:0000548!2.93e-31!679;CL:0000004!2.93e-31!679;CL:0000255!2.93e-31!679;CL:0000003!3.34e-28!722;CL:0000222!3.36e-16!119;CL:0000220!2.03e-15!246;CL:0002321!2.50e-15!248;CL:0000063!8.75e-15!578;CL:0000034!3.65e-13!444;CL:0000723!1.33e-12!436;CL:0000048!4.90e-12!430;CL:0000183!2.06e-11!59;CL:0000393!1.53e-10!60;CL:0000211!1.53e-10!60;CL:0000187!1.08e-09!54;CL:0000680!1.85e-09!57;CL:0000056!1.85e-09!57;CL:0000355!1.85e-09!57;CL:0000192!8.52e-09!42;CL:0000514!8.52e-09!42;CL:1000449!7.45e-08!16;CL:0000115!1.84e-07!35;CL:0000213!2.82e-07!57;CL:0000215!2.82e-07!57;CL:0000359!4.70e-07!32;CL:0002078!7.28e-07!44;CL:0002681!9.95e-07!13;CL:0002584!9.95e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:1000449;4.93e-08;15!CL:0002681;6.51e-07;12!CL:0002584;6.51e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.85e-16,121;CL:0002321,1.33e-15,250;CL:0000034,1.57e-13,441;CL:0000723,5.80e-13,433;CL:0000048,2.17e-12,427;CL:0000393,1.52e-10,61;CL:0000211,1.52e-10,61;CL:0000187,1.07e-09,55;CL:0000680,1.82e-09,58;CL:0000056,1.82e-09,58;CL:0000355,1.82e-09,58;CL:0000192,8.76e-09,43;CL:0000514,8.76e-09,43;CL:1000449,5.00e-08,15;CL:0000115,1.12e-07,36;CL:0000213,1.77e-07,58;CL:0000215,1.77e-07,58;CL:0002078,4.52e-07,45;CL:0000359,4.70e-07,32;CL:0002681,6.55e-07,12;CL:0002584,6.55e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.18e-12!118;UBERON:0004290!1.49e-09!70;UBERON:0000490!2.09e-09!138;UBERON:0000486!4.30e-09!82;UBERON:0001637!5.15e-09!42;UBERON:0003509!5.15e-09!42;UBERON:0004572!5.15e-09!42;UBERON:0002049!7.17e-09!79;UBERON:0007798!7.17e-09!79;UBERON:0005256!7.46e-09!143;UBERON:0000055!1.26e-08!69;UBERON:0004872!2.18e-08!84;UBERON:0000914!2.43e-08!83;UBERON:0002329!2.43e-08!83;UBERON:0003077!2.43e-08!83;UBERON:0003059!2.43e-08!83;UBERON:0007282!2.43e-08!83;UBERON:0009618!2.43e-08!83;UBERON:0007285!2.43e-08!83;UBERON:0001981!4.14e-08!60;UBERON:0007500!4.14e-08!60;UBERON:0004537!4.14e-08!60;UBERON:0006965!4.14e-08!60;UBERON:0001134!4.45e-08!61;UBERON:0002036!4.45e-08!61;UBERON:0003082!4.45e-08!61;UBERON:0004211!7.45e-08!16;UBERON:0001285!7.45e-08!16;UBERON:0007684!7.45e-08!16;UBERON:0003220!7.45e-08!16;UBERON:0004208!7.45e-08!16;UBERON:0004535!3.39e-07!110;UBERON:0002385!3.67e-07!63;UBERON:0001015!3.67e-07!63;UBERON:0000383!3.67e-07!63;UBERON:0001009!4.31e-07!113;UBERON:0006555!4.62e-07!17;UBERON:0005103!4.62e-07!17;UBERON:0000083!4.62e-07!17;UBERON:0009201!4.62e-07!17;UBERON:0004819!4.62e-07!17;UBERON:0006553!4.62e-07!17;UBERON:0003074!4.62e-07!17;UBERON:0003060!4.62e-07!17;UBERON:0000080!9.34e-07!18;UBERON:0002120!9.34e-07!18;UBERON:0004875!9.34e-07!18;UBERON:0005721!9.34e-07!18;UBERON:0005754!9.34e-07!18;UBERON:0007297!9.34e-07!18;UBERON:0001225!9.95e-07!13;UBERON:0008987!9.95e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;4.93e-08;15!UBERON:0004819;4.93e-08;15!UBERON:0001285;4.93e-08;15!UBERON:0007684;4.93e-08;15!UBERON:0003914;1.50e-07;74!UBERON:0001225;6.51e-07;12!UBERON:0008987;6.51e-07;12!UBERON:0000353;7.02e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,1.28e-12,117;UBERON:0007503,2.69e-12,78;UBERON:0000490,7.44e-11,148;UBERON:0002329,1.42e-09,71;UBERON:0003059,1.42e-09,71;UBERON:0007282,1.42e-09,71;UBERON:0004290,1.42e-09,71;UBERON:0009618,1.42e-09,71;UBERON:0002049,3.19e-09,78;UBERON:0007798,3.19e-09,78;UBERON:0000486,4.02e-09,83;UBERON:0001637,5.15e-09,42;UBERON:0003509,5.15e-09,42;UBERON:0004572,5.15e-09,42;UBERON:0007524,5.23e-09,73;UBERON:0000055,5.29e-09,68;UBERON:0003077,5.73e-09,72;UBERON:0007285,5.73e-09,72;UBERON:0004872,1.03e-08,83;UBERON:0007500,1.68e-08,59;UBERON:0001981,1.68e-08,59;UBERON:0004537,1.68e-08,59;UBERON:0006965,1.68e-08,59;UBERON:0001134,4.24e-08,62;UBERON:0002036,4.24e-08,62;UBERON:0003082,4.24e-08,62;UBERON:0004211,5.00e-08,15;UBERON:0009773,5.00e-08,15;UBERON:0001231,5.00e-08,15;UBERON:0001285,5.00e-08,15;UBERON:0007684,5.00e-08,15;UBERON:0004208,5.00e-08,15;UBERON:0004535,1.91e-07,109;UBERON:0005256,1.97e-07,122;UBERON:0001009,2.46e-07,112;UBERON:0002385,3.45e-07,64;UBERON:0001015,3.45e-07,64;UBERON:0000383,3.45e-07,64;UBERON:0006555,3.49e-07,16;UBERON:0004819,3.49e-07,16;UBERON:0003104,4.75e-07,160;UBERON:0009142,4.75e-07,160;UBERON:0001225,6.55e-07,12;UBERON:0008987,6.55e-07,12;UBERON:0000353,7.19e-07,15 | |||
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| ||
|short_description=p1@SF3B5 | |||
}} | }} |
Latest revision as of 21:03, 15 September 2015
Short description: | p1@SF3B5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SF3B5_5end |
Coexpression cluster: | NA |
Association with transcript: | 35bp_to_ENST00000367569, NM_031287, uc003qkr.1_5end |
EntrezGene: | SF3B5 |
HGNC: | 21083 |
UniProt: | Q9BWJ5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.85e-16 | 121 |
embryonic cell | 1.33e-15 | 250 |
stem cell | 1.57e-13 | 441 |
somatic stem cell | 5.80e-13 | 433 |
multi fate stem cell | 2.17e-12 | 427 |
electrically responsive cell | 1.52e-10 | 61 |
electrically active cell | 1.52e-10 | 61 |
muscle cell | 1.07e-09 | 55 |
muscle precursor cell | 1.82e-09 | 58 |
myoblast | 1.82e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.82e-09 | 58 |
smooth muscle cell | 8.76e-09 | 43 |
smooth muscle myoblast | 8.76e-09 | 43 |
epithelial cell of nephron | 5.00e-08 | 15 |
endothelial cell | 1.12e-07 | 36 |
lining cell | 1.77e-07 | 58 |
barrier cell | 1.77e-07 | 58 |
meso-epithelial cell | 4.52e-07 | 45 |
vascular associated smooth muscle cell | 4.70e-07 | 32 |
kidney cortical cell | 6.55e-07 | 12 |
renal cortical epithelial cell | 6.55e-07 | 12 |