FFCP PHASE1:Hg19::chr6:49681235..49681273,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:49681235..49681273,-
|short_description=p1@CRISP2
|description=CAGE_peak_1_at_CRISP2_5end
|association_with_transcript=0bp_to_ENST00000339139_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7180 | |EntrezGene=7180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12024 | |HGNC=12024 | ||
|TSSclassifier=strong | |||
|UniProt=P16562 | |UniProt=P16562 | ||
|association_with_transcript=0bp_to_ENST00000339139_5end | |||
|cluster_id=chr6:49681235..49681273,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_CRISP2_5end | |||
|id=chr6:49681235..49681273,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006298;3.76e-11;1!UBERON:0006242;1.15e-10;1!UBERON:0008947;4.98e-08;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.90e-30!115;UBERON:0003135!5.74e-13!11;UBERON:0006947!2.99e-10!3;UBERON:0004054!2.99e-10!3;UBERON:0005904!9.13e-08!4;UBERON:0003101!1.41e-07!22;UBERON:0000079!1.41e-07!22;UBERON:0003127!1.84e-07!2;UBERON:0003296!1.89e-07!4;UBERON:0010133!1.89e-07!4;UBERON:0001905!2.09e-07!2;UBERON:0002757!2.09e-07!2;UBERON:0010134!2.09e-07!2;UBERON:0002784!2.09e-07!2;UBERON:0005408!2.09e-07!2;UBERON:0001899!2.09e-07!2;UBERON:0001829!3.09e-07!2;UBERON:0000341!4.43e-07!2;UBERON:0001894!5.46e-07!7;UBERON:0006222!5.46e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003127;3.02e-20;2!UBERON:0001905;4.45e-20;2!UBERON:0002757;4.45e-20;2!UBERON:0010134;4.45e-20;2!UBERON:0005408;4.45e-20;2!UBERON:0001899;4.45e-20;2!UBERON:0003135;1.49e-14;11!UBERON:0006947;5.37e-14;3!UBERON:0004054;5.37e-14;3!UBERON:0001301;3.40e-11;1!UBERON:0001736;3.76e-11;1!UBERON:0001000;4.57e-11;1!UBERON:0005352;4.57e-11;1!UBERON:0005904;9.99e-11;4!UBERON:0002171;1.15e-10;1!UBERON:0006518;1.15e-10;1!UBERON:0008949;1.15e-10;1!UBERON:0000101;1.15e-10;1!UBERON:0002167;1.15e-10;1!UBERON:0003296;1.61e-10;4!UBERON:0010133;1.61e-10;4!UBERON:0002784;1.61e-10;4!UBERON:0001044;1.96e-07;6!UBERON:0003293;1.96e-07;6!UBERON:0003294;1.96e-07;6!UBERON:0010047;1.96e-07;6!UBERON:0003408;1.96e-07;6!UBERON:0000167;1.96e-07;6!UBERON:0003101;2.35e-07;22!UBERON:0000079;2.35e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,3.02e-20,2;UBERON:0001905,4.45e-20,2;UBERON:0002757,4.45e-20,2;UBERON:0010134,4.45e-20,2;UBERON:0005408,4.45e-20,2;UBERON:0001899,4.45e-20,2;UBERON:0007023,1.89e-16,114;UBERON:0003135,1.49e-14,11;UBERON:0006947,5.37e-14,3;UBERON:0004054,5.37e-14,3;UBERON:0001301,3.41e-11,1;UBERON:0001736,3.76e-11,1;UBERON:0006298,3.76e-11,1;UBERON:0001000,4.58e-11,1;UBERON:0005352,4.58e-11,1;UBERON:0005904,9.99e-11,4;UBERON:0002171,1.33e-10,1;UBERON:0006518,1.33e-10,1;UBERON:0008949,1.33e-10,1;UBERON:0000101,1.33e-10,1;UBERON:0002167,1.33e-10,1;UBERON:0003296,1.62e-10,4;UBERON:0010133,1.62e-10,4;UBERON:0002784,1.62e-10,4;UBERON:0001044,1.96e-07,6;UBERON:0003293,1.96e-07,6;UBERON:0003294,1.96e-07,6;UBERON:0010047,1.96e-07,6;UBERON:0000167,1.96e-07,6;UBERON:0003101,2.35e-07,22;UBERON:0000079,2.35e-07,22;UBERON:0002553,4.44e-07,61;UBERON:0005178,8.59e-07,34;UBERON:0002224,8.59e-07,34 | |||
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| ||
|short_description=p1@CRISP2 | |||
}} | }} |
Latest revision as of 04:51, 19 September 2015
Short description: | p1@CRISP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CRISP2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000339139_5end |
EntrezGene: | CRISP2 |
HGNC: | 12024 |
UniProt: | P16562 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 3.02e-20 | 2 |
pineal body | 4.45e-20 | 2 |
regional part of epithalamus | 4.45e-20 | 2 |
secretory circumventricular organ | 4.45e-20 | 2 |
circumventricular organ | 4.45e-20 | 2 |
epithalamus | 4.45e-20 | 2 |
adult organism | 1.89e-16 | 114 |
male reproductive organ | 1.49e-14 | 11 |
male genital duct | 5.37e-14 | 3 |
internal male genitalia | 5.37e-14 | 3 |
epididymis | 3.41e-11 | 1 |
submandibular gland | 3.76e-11 | 1 |
submandibular gland primordium | 3.76e-11 | 1 |
vas deferens | 4.58e-11 | 1 |
spermatic cord | 4.58e-11 | 1 |
duct of male reproductive system | 9.99e-11 | 4 |
lower lobe of right lung | 1.33e-10 | 1 |
right lung lobe | 1.33e-10 | 1 |
lower lobe of lung | 1.33e-10 | 1 |
lobe of lung | 1.33e-10 | 1 |
right lung | 1.33e-10 | 1 |
gland of diencephalon | 1.62e-10 | 4 |
neuroendocrine gland | 1.62e-10 | 4 |
regional part of diencephalon | 1.62e-10 | 4 |
saliva-secreting gland | 1.96e-07 | 6 |
gland of oral region | 1.96e-07 | 6 |
gland of foregut | 1.96e-07 | 6 |
oral gland | 1.96e-07 | 6 |
oral cavity | 1.96e-07 | 6 |
male organism | 2.35e-07 | 22 |
male reproductive system | 2.35e-07 | 22 |
anatomical cavity | 4.44e-07 | 61 |
thoracic cavity element | 8.59e-07 | 34 |
thoracic cavity | 8.59e-07 | 34 |