FFCP PHASE1:Hg19::chr6:99797362..99797377,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:99797362..99797377,-
|short_description=p13@C6orf168
|description=CAGE_peak_13_at_C6orf168_5end
|association_with_transcript=153bp_to_ENST00000389677,NM_03...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84553 | |EntrezGene=84553 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20742 | |HGNC=20742 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TGI0 | |UniProt=Q5TGI0 | ||
|association_with_transcript=153bp_to_ENST00000389677,NM_032511,uc003ppj.3_5end | |||
|cluster_id=chr6:99797362..99797377,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_13_at_C6orf168_5end | |||
|id=chr6:99797362..99797377,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002567;6.56e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,7.76e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.11e-27;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.58e-34!57;UBERON:0005068!3.58e-34!57;UBERON:0006241!3.58e-34!57;UBERON:0007135!3.58e-34!57;UBERON:0005743!3.27e-33!86;UBERON:0001017!1.12e-32!82;UBERON:0000073!3.47e-32!94;UBERON:0001016!3.47e-32!94;UBERON:0000955!5.83e-30!69;UBERON:0006238!5.83e-30!69;UBERON:0002616!8.31e-29!59;UBERON:0003075!1.15e-28!86;UBERON:0007284!1.15e-28!86;UBERON:0002346!1.23e-26!90;UBERON:0004121!1.69e-23!169;UBERON:0007023!3.38e-23!115;UBERON:0000924!1.91e-22!173;UBERON:0006601!1.91e-22!173;UBERON:0002780!4.14e-22!41;UBERON:0001890!4.14e-22!41;UBERON:0006240!4.14e-22!41;UBERON:0003080!2.35e-21!42;UBERON:0000033!1.30e-20!123;UBERON:0003056!6.14e-20!61;UBERON:0000153!7.63e-19!129;UBERON:0007811!7.63e-19!129;UBERON:0002020!1.28e-18!34;UBERON:0003528!1.28e-18!34;UBERON:0001893!2.80e-18!34;UBERON:0001869!3.37e-18!32;UBERON:0002791!2.82e-17!33;UBERON:0000956!2.49e-15!25;UBERON:0000203!2.49e-15!25;UBERON:0001950!1.20e-14!20;UBERON:0002619!1.76e-14!22;UBERON:0003076!1.78e-14!15;UBERON:0003057!1.78e-14!15;UBERON:0004733!1.99e-13!12;UBERON:0002028!1.99e-13!12;UBERON:0007277!1.99e-13!12;UBERON:0004732!3.87e-12!13;UBERON:0002680!6.84e-10!9;UBERON:0001895!6.84e-10!9;UBERON:0010092!6.84e-10!9;UBERON:0001871!4.78e-09!7;UBERON:0000119!5.41e-09!312;UBERON:0000064!1.56e-08!219;UBERON:0000483!4.93e-08!309;UBERON:0000475!6.90e-08!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;2.18e-20;9!UBERON:0001895;2.18e-20;9!UBERON:0004733;1.78e-15;12!UBERON:0002028;1.78e-15;12!UBERON:0004732;2.43e-14;13!UBERON:0002037;3.71e-14;6!UBERON:0001897;3.18e-11;2!UBERON:0010225;3.18e-11;2!UBERON:0000073;4.11e-10;53!UBERON:0002616;4.11e-10;53!UBERON:0001016;6.81e-10;83!UBERON:0000955;1.04e-09;68!UBERON:0000988;6.56e-08;3!UBERON:0002114;6.56e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,1.85e-20,9;UBERON:0001895,1.85e-20,9;UBERON:0010092,1.85e-20,9;UBERON:0004733,1.57e-15,12;UBERON:0002028,1.57e-15,12;UBERON:0007277,1.57e-15,12;UBERON:0004732,2.17e-14,13;UBERON:0002037,3.48e-14,6;UBERON:0006215,3.48e-14,6;UBERON:0000955,9.72e-14,68;UBERON:0006238,9.72e-14,68;UBERON:0000073,3.33e-13,53;UBERON:0002616,3.33e-13,53;UBERON:0003076,1.46e-12,15;UBERON:0003057,1.46e-12,15;UBERON:0001049,1.66e-12,56;UBERON:0005068,1.66e-12,56;UBERON:0006241,1.66e-12,56;UBERON:0007135,1.66e-12,56;UBERON:0001017,1.50e-11,81;UBERON:0001897,2.23e-11,2;UBERON:0010225,2.23e-11,2;UBERON:0001016,2.14e-10,89;UBERON:0010371,5.07e-09,104;UBERON:0003075,1.48e-08,82;UBERON:0007284,1.48e-08,82;UBERON:0002346,3.73e-08,86;UBERON:0000988,5.93e-08,3;UBERON:0002114,6.34e-08,2;UBERON:0004121,6.27e-07,171;UBERON:0000924,6.27e-07,171;UBERON:0006601,6.27e-07,171 | |||
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|short_description=p13@C6orf168 | |||
}} | }} |
Latest revision as of 06:07, 20 September 2015
Short description: | p13@C6orf168 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_C6orf168_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 153bp_to_ENST00000389677, NM_032511, uc003ppj.3_5end |
EntrezGene: | C6orf168 |
HGNC: | 20742 |
UniProt: | Q5TGI0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
regional part of metencephalon | 1.85e-20 | 9 |
metencephalon | 1.85e-20 | 9 |
future metencephalon | 1.85e-20 | 9 |
segmental subdivision of hindbrain | 1.57e-15 | 12 |
hindbrain | 1.57e-15 | 12 |
presumptive hindbrain | 1.57e-15 | 12 |
segmental subdivision of nervous system | 2.17e-14 | 13 |
cerebellum | 3.48e-14 | 6 |
rhombic lip | 3.48e-14 | 6 |
brain | 9.72e-14 | 68 |
future brain | 9.72e-14 | 68 |
regional part of nervous system | 3.33e-13 | 53 |
regional part of brain | 3.33e-13 | 53 |
posterior neural tube | 1.46e-12 | 15 |
chordal neural plate | 1.46e-12 | 15 |
neural tube | 1.66e-12 | 56 |
neural rod | 1.66e-12 | 56 |
future spinal cord | 1.66e-12 | 56 |
neural keel | 1.66e-12 | 56 |
central nervous system | 1.50e-11 | 81 |
dorsal plus ventral thalamus | 2.23e-11 | 2 |
thalamic complex | 2.23e-11 | 2 |
nervous system | 2.14e-10 | 89 |
ecto-epithelium | 5.07e-09 | 104 |
neural plate | 1.48e-08 | 82 |
presumptive neural plate | 1.48e-08 | 82 |
neurectoderm | 3.73e-08 | 86 |
pons | 5.93e-08 | 3 |
duodenum | 6.34e-08 | 2 |
ectoderm-derived structure | 6.27e-07 | 171 |
ectoderm | 6.27e-07 | 171 |
presumptive ectoderm | 6.27e-07 | 171 |