FFCP PHASE1:Hg19::chr7:40883521..40883532,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:40883521..40883532,+
|short_description=p@chr7:40883521..40883532,+
|description=CAGE_peak_at_chr7:40883521..40883532,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:40883521..40883532,+ | |||
|coexpression_cluster_id=C1136 | |||
|description=CAGE_peak_at_chr7:40883521..40883532,+ | |||
|id=chr7:40883521..40883532,+ | |||
|ontology_enrichment_celltype=CL:0002159!7.45e-33!13;CL:0000244!6.81e-18!4;CL:0000731!6.81e-18!4;CL:0002077!6.29e-17!33;CL:0002076!8.66e-17!43;CL:0000066!1.21e-16!254;CL:0002251!1.71e-15!21;CL:0002621!7.52e-15!3;CL:0000622!9.86e-15!5;CL:0002166!1.55e-14!3;CL:0000362!6.75e-14!8;CL:0000223!2.90e-13!59;CL:0000154!2.73e-12!6;CL:0000240!6.84e-12!6;CL:0000311!6.84e-12!6;CL:0000079!6.84e-12!6;CL:0000237!6.84e-12!6;CL:0000036!6.84e-12!6;CL:0000357!6.84e-12!6;CL:0000114!6.84e-12!6;CL:0002327!1.91e-10!4;CL:0000317!2.02e-10!2;CL:1000448!2.02e-10!2;CL:0002308!2.02e-10!2;CL:0002140!2.02e-10!2;CL:0000221!3.73e-10!71;CL:0000575!7.39e-10!2;CL:0000312!2.03e-08!5;CL:0000150!3.32e-08!9;CL:0000220!3.65e-08!246;CL:0002321!4.78e-08!248;CL:0000076!1.50e-07!62;CL:0002623!9.83e-07!3 | |||
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|ontology_enrichment_celltype_v019_2=CL:0002159,1.39e-45,14;CL:0002621,5.06e-41,3;CL:0002166,4.38e-40,3;CL:0000317,8.13e-28,2;CL:1000448,8.13e-28,2;CL:0002308,8.13e-28,2;CL:0002140,8.13e-28,2;CL:0002077,1.53e-18,34;CL:0000244,4.12e-14,4;CL:0000731,4.12e-14,4;CL:0000362,6.74e-14,9;CL:0000622,9.77e-12,5;CL:0000154,6.21e-10,6;CL:0000066,1.02e-08,253;CL:0000221,3.14e-08,72;CL:0000575,5.74e-08,2;CL:0000150,6.60e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;8.17e-15;1!DOID:3149;8.17e-15;1!DOID:3451;4.68e-08;2!DOID:4159;4.68e-08;2!DOID:0060122;4.68e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,8.17e-15,1;DOID:3149,8.17e-15,1;DOID:3451,4.69e-08,2;DOID:4159,4.69e-08,2;DOID:0060122,4.69e-08,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001949;5.41e-41;3!UBERON:0001708;3.17e-30;4!UBERON:0008895;3.17e-30;4!UBERON:0002419;8.70e-28;2!UBERON:0007771;8.70e-28;2!UBERON:0003297;8.70e-28;2!UBERON:0001821;8.70e-28;2!UBERON:0003487;8.70e-28;2!UBERON:0001820;8.70e-28;2!UBERON:0000486;1.18e-27;12!UBERON:0011159;2.47e-24;5!UBERON:0003929;5.40e-18;7!UBERON:0003350;7.94e-16;8!UBERON:0001828;7.94e-16;8!UBERON:0010371;2.52e-15;31!UBERON:0011137;2.03e-11;11!UBERON:0010323;2.03e-11;11!UBERON:0000365;2.17e-11;5!UBERON:0003729;5.75e-10;13!UBERON:0005910;1.21e-09;6!UBERON:0001003;1.41e-08;15!UBERON:0007376;1.41e-08;15!UBERON:0005911;2.27e-08;36!UBERON:0000075;5.06e-08;16!UBERON:0000161;5.57e-07;19!UBERON:0000166;5.57e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001949,5.06e-41,3;UBERON:0001708,2.87e-30,4;UBERON:0008895,2.87e-30,4;UBERON:0002419,8.13e-28,2;UBERON:0007771,8.13e-28,2;UBERON:0003297,8.13e-28,2;UBERON:0001821,8.13e-28,2;UBERON:0003487,8.13e-28,2;UBERON:0001820,8.13e-28,2;UBERON:0005089,8.13e-28,2;UBERON:0005088,8.13e-28,2;UBERON:0011159,2.28e-24,5;UBERON:0010188,1.99e-20,6;UBERON:0002539,1.99e-20,6;UBERON:0008816,1.99e-20,6;UBERON:0003102,5.32e-18,99;UBERON:0003350,7.74e-16,8;UBERON:0001828,7.74e-16,8;UBERON:0000365,1.76e-11,5;UBERON:0010323,1.96e-11,11;UBERON:0000033,3.78e-11,56;UBERON:0000153,5.14e-10,62;UBERON:0007811,5.14e-10,62;UBERON:0003729,5.66e-10,13;UBERON:0005910,1.01e-09,6;UBERON:0011137,4.19e-09,14;UBERON:0001003,1.44e-08,15;UBERON:0007376,1.44e-08,15;UBERON:0007383,1.44e-08,15;UBERON:0000075,4.94e-08,16;UBERON:0010371,2.42e-07,104;UBERON:0008814,3.39e-07,18;UBERON:0005085,4.16e-07,31 | |||
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| ||
|short_description=p@chr7:40883521..40883532,+ | |||
}} | }} |
Latest revision as of 10:00, 31 July 2015
Short description: | p@chr7:40883521..40883532, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:40883521..40883532, + |
Coexpression cluster: | C1136_Gingival_Mallassezderived_Keratinocyte_Sebocyte_Prostate_keratoacanthoma_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.39e-45 | 14 |
gingival epithelial cell | 5.06e-41 | 3 |
epithelial cell of Malassez | 4.38e-40 | 3 |
sebum secreting cell | 8.13e-28 | 2 |
epithelial cell of sweat gland | 8.13e-28 | 2 |
epithelial cell of skin gland | 8.13e-28 | 2 |
acinar cell of sebaceous gland | 8.13e-28 | 2 |
ecto-epithelial cell | 1.53e-18 | 34 |
transitional epithelial cell | 4.12e-14 | 4 |
urothelial cell | 4.12e-14 | 4 |
epidermal cell | 6.74e-14 | 9 |
acinar cell | 9.77e-12 | 5 |
protein secreting cell | 6.21e-10 | 6 |
epithelial cell | 1.02e-08 | 253 |
ectodermal cell | 3.14e-08 | 72 |
corneal epithelial cell | 5.74e-08 | 2 |
glandular epithelial cell | 6.60e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gingival epithelium | 5.06e-41 | 3 |
jaw skeleton | 2.87e-30 | 4 |
splanchnocranium | 2.87e-30 | 4 |
skin gland | 8.13e-28 | 2 |
epidermis gland | 8.13e-28 | 2 |
gland of integumental system | 8.13e-28 | 2 |
sebaceous gland | 8.13e-28 | 2 |
skin sebaceous gland | 8.13e-28 | 2 |
sweat gland | 8.13e-28 | 2 |
sweat gland placode | 8.13e-28 | 2 |
sebaceous gland placode | 8.13e-28 | 2 |
primary subdivision of cranial skeletal system | 2.28e-24 | 5 |
protuberance | 1.99e-20 | 6 |
pharyngeal arch | 1.99e-20 | 6 |
embryonic head | 1.99e-20 | 6 |
surface structure | 5.32e-18 | 99 |
epithelium of mucosa | 7.74e-16 | 8 |
gingiva | 7.74e-16 | 8 |
urothelium | 1.76e-11 | 5 |
cranial skeletal system | 1.96e-11 | 11 |
head | 3.78e-11 | 56 |
anterior region of body | 5.14e-10 | 62 |
craniocervical region | 5.14e-10 | 62 |
mouth mucosa | 5.66e-10 | 13 |
transitional epithelium | 1.01e-09 | 6 |
axial skeletal system | 4.19e-09 | 14 |
skin epidermis | 1.44e-08 | 15 |
outer epithelium | 1.44e-08 | 15 |
enveloping layer of ectoderm | 1.44e-08 | 15 |
subdivision of skeletal system | 4.94e-08 | 16 |
ecto-epithelium | 2.42e-07 | 104 |
pharyngeal arch system | 3.39e-07 | 18 |
ectodermal placode | 4.16e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 8.17e-15 | 1 |
keratoacanthoma | 8.17e-15 | 1 |
skin carcinoma | 4.69e-08 | 2 |
skin cancer | 4.69e-08 | 2 |
integumentary system cancer | 4.69e-08 | 2 |