FFCP PHASE1:Hg19::chr10:14050463..14050515,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55691 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25491 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T378 | |||
|association_with_transcript=16bp_to_ENST00000342409_5end | |||
|cluster_id=chr10:14050463..14050515,- | |||
|coexpression_cluster_id=C2994 | |||
|description=CAGE_peak_4_at_FRMD4A_5end | |||
|id=chr10:14050463..14050515,- | |||
|ontology_enrichment_celltype=CL:0000222!4.47e-16!119;CL:0002139!2.57e-13!24;CL:0000359!1.32e-12!32;CL:0000183!9.12e-12!59;CL:0000187!1.41e-11!54;CL:0000055!2.01e-11!180;CL:0000192!6.38e-11!42;CL:0000514!6.38e-11!42;CL:0000680!1.98e-10!57;CL:0000056!1.98e-10!57;CL:0000355!1.98e-10!57;CL:0000393!1.24e-09!60;CL:0000211!1.24e-09!60;CL:0000071!3.13e-09!18;CL:0002546!3.13e-09!18;CL:0000115!3.62e-09!35;CL:0002078!7.57e-08!44;CL:0002539!6.76e-07!10;CL:0000213!6.99e-07!57;CL:0000215!6.99e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002139;8.32e-19;24!CL:0000359;1.60e-14;32!CL:0000115;3.36e-13;36!CL:0000071;6.75e-13;18!CL:0002078;1.67e-10;45!CL:0000192;4.08e-08;43!CL:0002539;4.33e-08;10!CL:1000413;7.48e-08;9!CL:0002138;1.11e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,4.35e-19,24;CL:0000222,7.36e-17,121;CL:0000115,7.08e-16,36;CL:0000359,2.52e-15,32;CL:0002078,3.57e-14,45;CL:0000071,4.07e-13,18;CL:0002546,4.07e-13,18;CL:0000213,4.16e-10,58;CL:0000215,4.16e-10,58;CL:0000192,4.42e-10,43;CL:0000514,4.42e-10,43;CL:0000187,3.98e-08,55;CL:0002539,4.96e-08,10;CL:1000413,5.16e-08,9;CL:0005020,9.72e-08,6;CL:0002138,9.72e-08,6;CL:0005022,9.72e-08,6;CL:0000680,2.88e-07,58;CL:0000056,2.88e-07,58;CL:0000355,2.88e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;6.75e-13;18!CL:0000514;4.08e-08;43!CL:0005022;1.11e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;4.33e-08;14!DOID:201;1.00e-06;6!DOID:0060100;1.00e-06;6 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.58e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0000055!7.17e-27!69;UBERON:0002049!2.40e-24!79;UBERON:0007798!2.40e-24!79;UBERON:0001981!4.22e-24!60;UBERON:0007500!4.22e-24!60;UBERON:0004537!4.22e-24!60;UBERON:0006965!4.22e-24!60;UBERON:0004872!2.39e-22!84;UBERON:0001637!4.02e-20!42;UBERON:0003509!4.02e-20!42;UBERON:0004572!4.02e-20!42;UBERON:0001009!1.57e-19!113;UBERON:0004535!3.62e-19!110;UBERON:0004573!8.23e-18!33;UBERON:0004571!8.23e-18!33;UBERON:0000477!1.12e-16!286;UBERON:0004111!3.38e-16!241;UBERON:0000025!2.02e-15!194;UBERON:0003914!3.32e-14!118;UBERON:0000119!5.65e-12!312;UBERON:0000947!6.10e-12!21;UBERON:0010191!6.10e-12!21;UBERON:0001134!7.57e-12!61;UBERON:0002036!7.57e-12!61;UBERON:0003082!7.57e-12!61;UBERON:0002385!9.31e-12!63;UBERON:0001015!9.31e-12!63;UBERON:0000383!9.31e-12!63;UBERON:0000490!1.20e-11!138;UBERON:0000483!1.78e-11!309;UBERON:0004290!1.27e-10!70;UBERON:0000914!4.91e-10!83;UBERON:0002329!4.91e-10!83;UBERON:0003077!4.91e-10!83;UBERON:0003059!4.91e-10!83;UBERON:0007282!4.91e-10!83;UBERON:0009618!4.91e-10!83;UBERON:0007285!4.91e-10!83;UBERON:0001986!3.13e-09!18;UBERON:0004638!3.13e-09!18;UBERON:0004852!3.13e-09!18;UBERON:0000486!4.51e-09!82;UBERON:0000467!9.27e-09!625;UBERON:0000475!1.10e-08!365;UBERON:0000480!1.32e-08!626;UBERON:0006914!1.57e-08!25;UBERON:0000468!1.71e-08!659;UBERON:0000487!1.25e-07!22;UBERON:0004237!6.76e-07!10;UBERON:0004695!6.76e-07!10;UBERON:0002111!6.76e-07!10;UBERON:0004178!6.76e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.56e-21;33!UBERON:0004571;2.56e-21;33!UBERON:0001637;7.36e-20;42!UBERON:0003509;7.36e-20;42!UBERON:0004572;7.36e-20;42!UBERON:0000055;1.26e-17;65!UBERON:0007500;2.42e-15;56!UBERON:0001981;2.42e-15;56!UBERON:0004537;2.42e-15;56!UBERON:0000947;1.93e-14;21!UBERON:0010191;1.93e-14;21!UBERON:0004638;6.75e-13;18!UBERON:0001986;6.75e-13;18!UBERON:0004852;6.75e-13;18!UBERON:0002049;5.11e-12;75!UBERON:0007798;5.11e-12;75!UBERON:0006914;2.79e-11;25!UBERON:0000487;1.24e-10;22!UBERON:0003914;4.45e-10;74!UBERON:0004237;4.33e-08;10!UBERON:0004695;4.33e-08;10!UBERON:0002111;4.33e-08;10!UBERON:0004178;4.33e-08;10!UBERON:0003915;7.48e-08;9!UBERON:0004700;7.48e-08;9!UBERON:0001917;7.48e-08;9!UBERON:0004535;2.57e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.75e-34,68;UBERON:0007500,9.94e-30,59;UBERON:0001981,9.94e-30,59;UBERON:0004537,9.94e-30,59;UBERON:0006965,9.94e-30,59;UBERON:0002049,1.29e-29,78;UBERON:0007798,1.29e-29,78;UBERON:0004872,6.53e-27,83;UBERON:0001637,5.11e-26,42;UBERON:0003509,5.11e-26,42;UBERON:0004572,5.11e-26,42;UBERON:0004535,6.10e-23,109;UBERON:0004573,6.47e-23,33;UBERON:0004571,6.47e-23,33;UBERON:0001009,1.03e-21,112;UBERON:0003914,5.13e-20,117;UBERON:0004111,3.32e-16,240;UBERON:0000025,1.48e-15,192;UBERON:0000947,2.12e-14,21;UBERON:0010191,2.12e-14,21;UBERON:0004638,4.07e-13,18;UBERON:0001986,4.07e-13,18;UBERON:0004852,4.07e-13,18;UBERON:0006914,1.79e-11,25;UBERON:0000487,7.43e-11,22;UBERON:0000490,8.18e-10,148;UBERON:0000119,1.06e-09,309;UBERON:0000483,2.27e-09,306;UBERON:0001134,1.51e-08,62;UBERON:0002036,1.51e-08,62;UBERON:0003082,1.51e-08,62;UBERON:0003081,2.31e-08,203;UBERON:0004237,4.96e-08,10;UBERON:0004695,4.96e-08,10;UBERON:0002111,4.96e-08,10;UBERON:0004178,4.96e-08,10;UBERON:0003915,5.16e-08,9;UBERON:0004700,5.16e-08,9;UBERON:0001917,5.16e-08,9;UBERON:0002385,5.52e-08,64;UBERON:0001015,5.52e-08,64;UBERON:0000383,5.52e-08,64;UBERON:0007503,1.06e-07,78;UBERON:0001473,6.99e-07,8;UBERON:0004536,6.99e-07,8;UBERON:0006558,6.99e-07,8;UBERON:0007524,7.90e-07,73;UBERON:0002329,9.02e-07,71;UBERON:0003059,9.02e-07,71;UBERON:0007282,9.02e-07,71;UBERON:0004290,9.02e-07,71;UBERON:0009618,9.02e-07,71 | |||
|phase1_expression=0,0,0.563817616383885,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,13.4465029290355,16.8754467846714,10.9546513558106,9.27072317701963,0,0,0,0.286235987131057,0,0.376627918784408,0.687720651731561,0.656804715599566,0.708397031823113,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0.188242339542605,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590129310341499,0,0.411202997999018,0,0,0.946895611469467,0,0.111410456885174,1.47302953737419,0.886135578334485,0.812411591295047,0.25618263945135,0.260118695119756,0,0,0,0,0,0,0.339928028092699,1.14966148080576,0.68725489096526,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,2.43806866313962,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.72038491523742,0,0,0,0,0,0,0,0,1.78886166630035,5.16140757063675,10.7613555498354,3.39184765154406,2.09749718104953,4.40188867104108,2.71693456497854,5.68516870172524,10.3172216179146,9.37217715741077,8.45941565929209,3.80136052859256,5.12530320851156,5.51494620518803,1.62028389576352,2.32179293538607,4.26605807989723,4.27923625836624,6.13266549863533,0,1.83201743930407,0,0,0,6.46063537203914,2.02608818663328,19.0669220371035,5.44989579422746,2.12801029319014,0,1.06748995729705,0.74000264525148,0,3.3677668017422,1.79808093424805,1.66493170409425,0.576175924479999,0,0.312160076830321,1.1409436430889,0.149448680551801,0.352303495931295,0,0.280901613404497,0.408308342509787,1.10550885580591,0.206651562351531,2.37600571456411,0.741800787835671,1.82032272387605,0,0.168336113954066,1.12606667884768,0,1.75591048352335,2.45190236639216,4.05642759047811,0.340296549480063,1.25572744982203,0.640672166455702,0.211931901159562,1.20036438433761,0.412210116953756,2.57640540045629,0.744467425326359,0.168776332241266,0.0974370051611986,1.00973509697646,0.736399189138395,0.80823028409406,1.42003837006646,0.201504196455281,0.847802961552438,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,1.47008711385542,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0,0,0,0,0,0.927443239800615,0.469634776943287,17.9014395223732,12.0376233269919,4.75635380586496,0,0,0,0,0,0,0,0.141775097242386,0,0.290633938513962,0,0,0,8.08579650609011,5.33243827642757,6.05963680446624,0.761974731506028,0,0,0,0.102827492703324,0,0.285826432630578,1.79409734952577,0.43596006883328,1.0267360014933,4.39523833576444,0,0,1.86156681609409,1.04007436911366,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0.904318131178758,0.871533458600294,0.499864955910285,0,0,0,4.55287225434007,1.14861935834114,2.85273810081437,0,0,0.179060963239896,0,0,0.431255149719035,0,0.76228387266739,0,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,5.19927153827018,3.03329280955175,1.10391690523754,2.22568688486155,0,0,0,0,0.184369168541703,1.12948698808508,0.391602314925481,0.686286847621712,0.206768026122887,0,0.213455115606889,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,1.02341449813341,0.482561763430822,0,0.616838775210622,0,0.246381468041427,2.59627214591811,0.464841513839837,0,0,0,0.68888668898764,1.82091168006717,0.524497659837696,0,0.0770153371044148,0,0,0.211103257785751,4.54933536283586,7.31402932689017,2.15915916102139,1.54227252690289,0.541892875087706,0,0,0,0,0,0,0,0,0,0.618246069886334,2.01452822600355,2.47528499761764,2.87132768998086,0,1.6068392984416,0.773365746336976,0.308097234229289,0.15350367472613,1.24052915236078,0.429680979473094,0.435050081742686,0.681813019328807,0.801288320820636,0,0,0,0,0.929691098594572,6.92587163027408,1.3940745403212,2.15623506123262,4.25844824253617,3.47973196830029,12.0460742417548,6.01124524316363,0,1.89827654831236,0.190630193923825,0.255897791311334,0,1.59101623962968,8.63443504219153,0.359744915166629,0.274537029736055,0.824686816419805,3.841467149893,3.17020642346017,3.37006764991185,0,3.89941583410055,3.16950440270266,2.18399858252777,0.989838023675989,0,1.10273068709225,1.32687795048244,4.38450885253763,0,0,8.31932545547087,4.3375289733965,1.40847801266121,0.860468113224309,0.0982490410131212,4.280052617775,0.709522128141196,0.422215270595328,3.29294892959902,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,19.2495971052672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0.296964680832639,0,0,0.422008249231538,6.45590489132854,0,0.844501632511974,0.597743964753209,0.828851746593443,0,1.02268682502155,0,10.5753459805015,0.808815160325942,0,0,0.690503839458535,0,5.55684950723184,0,0.278304294485554,0,0,0,0,0,0,0,0,0,2.08349993919951,2.65722415744152,0.120596438625408,0,0.774054819518572,0.295547618953547,0,0,0,0.538651809526579,0,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.530745387020035,1.83309043480088,1.48260564340311,0.86494757262552,0.835375596043643,1.07841812769083,7.2231988256891,0,0,0,0,1.18375320854817,2.41981432097328,0.30607276163049,2.27471686662557,0.60129367765797,0.103688191397247,6.64653872707185,8.27479889688747,4.39506085770115,9.55779438183671,0,0,0,0,0,1.04836000945218,0.687944129886466,0,0,0,0.193978032976839,10.8555035830545,6.55344148263544,4.65942543798953,15.6984543245362,1.01297273529406,0,1.52301758477914,0.213452994739353,0,0,0,0,0,0.372757606696298,0,1.22313785466253,1.67364554099733,0.305994652908965,2.60055530911367,1.80126086612937,0.547621515567972,0,5.15718529703949,0,0.279282401272254,1.14580212005842,2.15361907373044,0.399358000997982,0.858452096273142,0.669514372325618,3.62790751428322,4.68389848605125,0,0,0,0,1.67326718575073,7.19723322559168,2.38568906942791,0.544813624446302,0,0,0,0,0,0.668245123238271,0,0,2.36045646607491,0.844802692155252,0,0.575745591958336,0.714695326373367,0,2.79695391420225,0,0,0,2.39460383124975,0,4.08931252285012,9.06496732161006,0.293104467356165,1.32506888912221,2.19781025814636,0.39669780522807,0,0,0.427149650270779,5.34494637338864,2.48543433208317,0.992332043623902,0,0,0.638341257770182,0,0.7520696820681,0.306345576763462,0.655745261419609,0,0,1.22026264901963,0.3755727921195,1.72022758707021,0.554645257684261,1.55241007353459,0,1.99968652739371,1.06154382279153,0.285465333544967,2.11739237728355,0,0,0.298509605773748,0.467426619694449,0,0.378806010550178,0.754703705257725,0,1.60188047877847,0,2.33155800874171,2.80924784980304,5.41609008356588,11.2450778040901,4.34736279253526,2.90294345488599,2.92425886013794,3.65221543268214,1.35231848097497,0,2.03435366602331,5.63730843527934,1.93339002676479,7.4245401580559,2.3885753321917,0,0.343395705182793,0.336749488765919,16.4040367697246,0,0,0.782982875895635,0,2.08370226891451,0,0,0,0.438568099157414,0.176689145945881,0,0,0,0,3.3424595179512,1.10606748921385,0,0,0,0.982829546539238,0,1.26787274015176,0,0,0,6.2426754892352,2.20927140302209,0,0,1.79052119825112,0,0,0.327628914576042,0,7.01497236335553,0,0,7.95010876633546,0,0,1.41070377476274,0,0.449604575675217,0,0.478901577171454,0,0,0.345786262321089,0.484426936895553,0,0,0,0,0,1.1441462864015,74.5588720144909,0.198916222116275,0.0752103283492573,3.42898616795984,0,0,0.655087670040387,0,0.405225507710368,0,0.620060389503552,0.570742291745161,1.09394961803644,0,0,0.527613733078862,0,1.60710550763486,0.672567444437648,4.85572483389305,4.32558163567465,0.354809480650555,4.26365753956383,1.20041606606193,0.815636795721981,0.591954962065642,0,0,0.470958557103084,1.57115589916002,0,2.73947616152849,0.215927591218621,0,5.50369390160254,0.316027223465453,0,1.73858272302579,8.81882501203278,0,0,0,0,6.1532640379894,3.91981661892125,0.423387050190929,0,0.31020638566432,0,0,0,0,5.17943069750316,0.307988420568741,3.4794432940146,3.39997695141398,0,0,0,0.11294608203896,0.219881033490858,2.8682940277668,0.308696632431779,1.5299169235277,0,0.245148321753905,0,4.12247780941385,1.18818560130834,2.113278637917,0.849635573439084,0.469919589899268,1.61144719933943,1.69899965072379,0,0,0,4.3820183294791,0,1.00337708206016,3.47097436825006,0.135982980381829,0.872701380680755,3.7031878836078,0.743990036333503,0,2.16313281061895,0,0,0,0,0,0,0,0.378893491091197,0,2.48750831837634,0.413731983447581,1.27940389140589,1.90451545170992,0.322944549180031,1.48979314310059,10.0918676322552,0,1.21270313374932,1.08858373948481,0.684466602170562,1.81850543139386,0.430333232356058,1.66330178273007,2.52350132694021,0.426909383510862,5.7921684686082,0.718601616852695,0,1.71138021856013,3.66206560484165,0.665756774185513,1.61019034872821,0.320568492303233 | |||
|short_description=p4@FRMD4A | |||
}} |
Latest revision as of 07:05, 17 September 2015
Short description: | p4@FRMD4A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_FRMD4A_5end |
Coexpression cluster: | C2994_osteosarcoma_Fibroblast_mesodermal_Wilms_fibrous_Lymphatic_neuroectodermal |
Association with transcript: | 16bp_to_ENST00000342409_5end |
EntrezGene: | FRMD4A |
HGNC: | 25491 |
UniProt: | Q5T378 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 4.35e-19 | 24 |
mesodermal cell | 7.36e-17 | 121 |
endothelial cell | 7.08e-16 | 36 |
vascular associated smooth muscle cell | 2.52e-15 | 32 |
meso-epithelial cell | 3.57e-14 | 45 |
blood vessel endothelial cell | 4.07e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.07e-13 | 18 |
lining cell | 4.16e-10 | 58 |
barrier cell | 4.16e-10 | 58 |
smooth muscle cell | 4.42e-10 | 43 |
smooth muscle myoblast | 4.42e-10 | 43 |
muscle cell | 3.98e-08 | 55 |
aortic smooth muscle cell | 4.96e-08 | 10 |
endothelial cell of artery | 5.16e-08 | 9 |
lymphangioblast | 9.72e-08 | 6 |
endothelial cell of lymphatic vessel | 9.72e-08 | 6 |
vascular lymphangioblast | 9.72e-08 | 6 |
muscle precursor cell | 2.88e-07 | 58 |
myoblast | 2.88e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.88e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.58e-08 | 14 |