FFCP PHASE1:Hg19::chr10:17279533..17279566,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:17279533..17279566,+ | |||
|coexpression_cluster_id=C2999 | |||
|description=CAGE_peak_at_chr10:17279533..17279566,+ | |||
|id=chr10:17279533..17279566,+ | |||
|ontology_enrichment_celltype=CL:0000055!8.77e-16!180;CL:0002057!8.57e-14!42;CL:0000048!6.37e-13!430;CL:0000860!2.02e-12!45;CL:0000723!4.04e-12!436;CL:0000557!1.78e-11!71;CL:0000034!1.97e-11!444;CL:0002009!3.23e-11!65;CL:0002194!7.99e-11!63;CL:0000576!7.99e-11!63;CL:0000040!7.99e-11!63;CL:0000559!7.99e-11!63;CL:0000839!1.44e-10!70;CL:0002371!4.09e-10!591;CL:0000057!1.09e-09!75;CL:0000766!4.06e-09!76;CL:0002620!2.66e-08!23;CL:0000144!1.11e-07!625;CL:0000680!4.55e-07!57;CL:0000056!4.55e-07!57;CL:0000355!4.55e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.92e-20;33!CL:0002057;2.92e-20;33!CL:0000473;5.93e-16;39!CL:0000234;5.93e-16;39!CL:0000576;1.59e-10;48!CL:0002620;1.27e-08;23!CL:0000766;2.30e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.61e-19,42;CL:0002057,1.61e-19,42;CL:0000473,4.92e-19,48;CL:0000234,4.92e-19,48;CL:0000557,1.84e-16,67;CL:0000839,5.63e-16,66;CL:0002009,1.11e-15,61;CL:0002194,1.11e-15,59;CL:0000576,1.11e-15,59;CL:0000040,1.11e-15,59;CL:0000559,1.11e-15,59;CL:0000766,2.33e-14,72;CL:0000048,8.74e-13,427;CL:0000723,2.00e-12,433;CL:0000034,8.08e-12,441;CL:0002620,2.18e-08,23;CL:0002320,5.53e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.75e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.37e-15!167;UBERON:0003081!2.29e-13!216;UBERON:0002371!5.37e-10!80;UBERON:0001474!1.11e-09!86;UBERON:0004535!2.08e-09!110;UBERON:0002390!2.19e-09!102;UBERON:0003061!2.19e-09!102;UBERON:0004765!2.20e-09!101;UBERON:0001434!2.20e-09!101;UBERON:0002193!2.93e-09!112;UBERON:0001009!1.02e-08!113;UBERON:0002049!1.68e-08!79;UBERON:0007798!1.68e-08!79;UBERON:0000926!1.84e-08!448;UBERON:0004120!1.84e-08!448;UBERON:0006603!1.84e-08!448;UBERON:0000468!2.82e-07!659;UBERON:0000055!5.44e-07!69;UBERON:0004290!6.48e-07!70;UBERON:0001981!8.33e-07!60;UBERON:0007500!8.33e-07!60;UBERON:0004537!8.33e-07!60;UBERON:0006965!8.33e-07!60 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.15e-16,167;UBERON:0000926,1.62e-15,315;UBERON:0004120,1.62e-15,315;UBERON:0006603,1.62e-15,315;UBERON:0002371,2.53e-15,76;UBERON:0001474,1.06e-14,82;UBERON:0004765,1.40e-13,90;UBERON:0002405,1.77e-13,93;UBERON:0001434,2.64e-13,100;UBERON:0003081,6.27e-13,203;UBERON:0002193,1.50e-11,108;UBERON:0002390,9.44e-11,98;UBERON:0003061,9.44e-11,98;UBERON:0002049,1.51e-08,78;UBERON:0007798,1.51e-08,78;UBERON:0002199,1.32e-07,46;UBERON:0002416,1.32e-07,46;UBERON:0002384,2.25e-07,371;UBERON:0000055,7.00e-07,68;UBERON:0004535,7.87e-07,109 | |||
|phase1_expression=1.45342703416445,0.428201047781966,1.69145284915165,1.0007329835313,0.893922188854576,0,2.53299878168311,3.15859936713415,0.261185628199839,0.737201809504527,0,0.218441372130172,0,2.22779435328084,0.331397375727916,4.03395087871065,0.602694528023977,0.730310090387373,1.46379839637152,7.63350560076085,0.408001382488506,0.313454721478088,2.57612388417951,1.77936752594749,0.502170558379211,0,0,0.0787107813136792,0,0,2.32224184974114,0,0,0,0,0,0,2.76997704265939,5.61524452916397,3.25516306073778,0.223915474239924,1.29557466407592,0,2.18097358169347,1.88937971844405,4.36651310138069,5.34586784883075,3.28934310417461,4.02618282163635,5.46615545412086,4.09857130446561,6.62150243688039,5.86067657252252,2.5819387343353,0,3.57660445130949,1.91034305040492,3.59557575112135,5.20342617030534,8.34415470397843,10.2293940127847,4.28806690242731,1.39624560335142,4.26224750532694,6.38460324982885,4.53908179752912,8.09668923694247,9.2962006144995,6.77927793946262,3.9093992046921,9.08099253950053,9.94349617166425,11.3926459478718,0.845021145247767,0.212604299965044,0,0.22465726229299,0.450530678524519,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.790152254325231,0.393419540227666,0.786021525498329,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0,0.883817722424512,0,0,0.25618263945135,0.650296737799391,1.47994114143309,0.829050053357545,0,0,0.267540828089713,0,0.566546713487831,0,0.34362744548263,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,1.00803371612366,0.534880391567015,0.144824403882799,21.9426179682566,0,0.12786256184353,18.7948359239974,1.50401373190767,0.724232594804119,0.795285947051099,0.973269740605272,1.79616152611729,1.33037638477538,0.351339142772504,0.261958150995425,0,0,3.57002133020152,4.87563264437948,0.132957960518865,0.953962497221368,0,0,0.596287222100115,0.860234595106124,2.77712401286075,0,2.09749718104953,1.10047216776027,0,2.32575083252396,2.13459757612026,3.01248551488203,15.3075140501476,4.56163263431108,1.46437234528902,9.92690316933846,0,1.16089646769304,0,0.337834441449967,1.53316637465883,0.949265659568129,0.183201743930407,0,0,0,2.48485975847659,1.2663051166458,2.38336525463794,3.72887606973458,0.709336764396714,2.80338800071154,4.2699598291882,0,0.933633106199299,0.67355336034844,1.14423332179421,4.08665054641315,0.576175924479999,0.937285727335186,1.24864030732128,5.13424639390004,1.49448680551801,1.05691048779388,0.323745888736263,1.26405726032024,0.61246251376468,1.47401180774122,0.206651562351531,3.56400857184616,0.989067717114227,0,0,1.34668891163253,0.375355559615893,0.277064115484183,2.63386572528503,0.612975591598039,0.300476117813194,2.04177929688038,7.89314397030993,2.98980344345994,3.39091041855299,4.20127534518163,0.824420233907511,4.3798891807757,3.90845398296339,3.88185564154912,1.16924406193438,8.83518209854401,6.71964260088785,0.80823028409406,2.13005755509969,0.201504196455281,4.91725717700414,0.386521706326594,1.36373060295417,0,0,0,0.116193942869518,0.207322110030741,0,0.36497735907583,0,1.28648187638577,0,0.464367928031979,2.16563844500876,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,1.2347220339942,0,0,0,0,0,0,1.20097467208968,1.42675371031213,0,0,0.0925884451585296,2.28065813717227,0,0,3.014190529352,0.117408694235822,3.60916119402685,0,1.33177906564219,0,0,0.984868024349589,3.7440682422278,0.148631162288728,0,0,0,0.895585227028483,0,0,0,0.352193736052904,5.80518723514162,7.20599767084807,3.91351543621778,0.253991577168676,0,0,1.71072446022705,0.205654985406647,0,0.285826432630578,0.448524337381443,0,0.5867062865676,2.97324946242889,0,1.690605505112,0.797814349754612,0,1.80045161983499,0,0.532844358032199,1.00084595560703,0.542621605391443,0,0.977208552881205,0.355391948742546,0.791951872933429,0.904318131178758,0,0.199945982364114,1.2162378064119,0,2.10833939483032,1.4377491329495,1.14861935834114,9.98458335285029,1.15825045334063,0.61642896765115,2.68591444859843,0.336255431980582,0.197030760201927,0.646882724578552,0.256686072559497,1.01637849688985,0,3.09315525111078,0.167516265334349,2.55175500661265,0.749007023947182,0,0,2.33113834266366,0.500170521059677,0.813795071099207,4.78332981520856,5.35286966391485,3.46945313074656,4.56851518471581,3.91229929646035,0,0,1.32845119707087,0.184369168541703,4.17041349446798,3.52442083432933,0,0.82707210449155,0.647142602455851,0.213455115606889,0,0,0,0.992431231275107,2.14846762603287,0.280660094433074,3.07533958213682,0.511707249066704,0.160853921143607,0,1.54209693802656,1.24293207719189,2.87445046048332,0.519254429183621,0.813472649219715,0,0.200506470303285,0,1.49258782613989,1.0925470080403,0.393373244878272,0.902399225814824,0.462092022626489,0.784349769176855,0,0.527758144464379,0,0.170093705276516,0.647747748306418,0,2.16757150035082,0,0,0,0.447749509444357,0,0,0.512900250232778,1.96808787419823,0,0.309123034943167,0.0915694648183434,0.247528499761764,0,0,1.6068392984416,1.35339005608971,0.770243085573222,0.460511024178389,0.8270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| |||
|short_description=p@chr10:17279533..17279566,+ | |||
}} |
Latest revision as of 12:19, 23 July 2015
Short description: | p@chr10:17279533..17279566, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17279533..17279566, + |
Coexpression cluster: | C2999_renal_Cardiac_CD14_Chondrocyte_Myoblast_Fibroblast_Endothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.61e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.61e-19 | 42 |
defensive cell | 4.92e-19 | 48 |
phagocyte | 4.92e-19 | 48 |
granulocyte monocyte progenitor cell | 1.84e-16 | 67 |
myeloid lineage restricted progenitor cell | 5.63e-16 | 66 |
macrophage dendritic cell progenitor | 1.11e-15 | 61 |
monopoietic cell | 1.11e-15 | 59 |
monocyte | 1.11e-15 | 59 |
monoblast | 1.11e-15 | 59 |
promonocyte | 1.11e-15 | 59 |
myeloid leukocyte | 2.33e-14 | 72 |
multi fate stem cell | 8.74e-13 | 427 |
somatic stem cell | 2.00e-12 | 433 |
stem cell | 8.08e-12 | 441 |
skin fibroblast | 2.18e-08 | 23 |
connective tissue cell | 5.53e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.15e-16 | 167 |
mesoderm | 1.62e-15 | 315 |
mesoderm-derived structure | 1.62e-15 | 315 |
presumptive mesoderm | 1.62e-15 | 315 |
bone marrow | 2.53e-15 | 76 |
bone element | 1.06e-14 | 82 |
skeletal element | 1.40e-13 | 90 |
immune system | 1.77e-13 | 93 |
skeletal system | 2.64e-13 | 100 |
lateral plate mesoderm | 6.27e-13 | 203 |
hemolymphoid system | 1.50e-11 | 108 |
hematopoietic system | 9.44e-11 | 98 |
blood island | 9.44e-11 | 98 |
vasculature | 1.51e-08 | 78 |
vascular system | 1.51e-08 | 78 |
integument | 1.32e-07 | 46 |
integumental system | 1.32e-07 | 46 |
connective tissue | 2.25e-07 | 371 |
vessel | 7.00e-07 | 68 |
cardiovascular system | 7.87e-07 | 109 |