FFCP PHASE1:Hg19::chr10:37485037..37485044,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:37485037..37485044,+ | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr10:37485037..37485044,+ | |||
|id=chr10:37485037..37485044,+ | |||
|ontology_enrichment_celltype=CL:0002274!3.66e-14!5;CL:0000457!3.66e-14!5;CL:0002191!3.66e-14!5;CL:0000097!3.66e-14!5;CL:0000831!3.66e-14!5;CL:0002028!3.66e-14!5;CL:0000163!4.34e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4!CL:0000097;1.71e-14;5!CL:0000163;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4;CL:0000097,1.60e-14,5;CL:0002028,1.60e-14,5;CL:0000163,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0005062;9.45e-18;4!UBERON:0007284;9.45e-18;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0002134!3.58e-09!1;UBERON:0005208!3.58e-09!1;UBERON:0005946!3.58e-09!1;UBERON:0005965!3.58e-09!1;UBERON:0002078!3.58e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;3.34e-66;1!UBERON:0005208;3.34e-66;1!UBERON:0004145;3.34e-66;1!UBERON:0005946;3.34e-66;1!UBERON:0005965;3.34e-66;1!UBERON:0002078;3.34e-66;1!UBERON:0002081;5.96e-34;2!UBERON:0002133;5.96e-34;2!UBERON:0003978;3.66e-23;3!UBERON:0004151;3.66e-23;3!UBERON:0000946;3.66e-23;3!UBERON:0001911;7.35e-18;4!UBERON:0000310;5.73e-08;10!UBERON:0010313;6.34e-08;10!UBERON:0001443;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,4.66e-66,1;UBERON:0005208,4.66e-66,1;UBERON:0005946,4.66e-66,1;UBERON:0005965,4.66e-66,1;UBERON:0002078,4.66e-66,1;UBERON:0002081,7.05e-34,2;UBERON:0002133,7.05e-34,2;UBERON:0010227,7.05e-34,2;UBERON:0003978,4.09e-23,3;UBERON:0009751,4.09e-23,3;UBERON:0004151,4.09e-23,3;UBERON:0000946,4.09e-23,3;UBERON:0002523,4.09e-23,3;UBERON:0005983,4.09e-23,3;UBERON:0004145,4.09e-23,3;UBERON:0002165,4.09e-23,3;UBERON:0002062,4.09e-23,3;UBERON:0007280,4.09e-23,3;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0004797,9.89e-11,7;UBERON:0000076,1.24e-09,8;UBERON:0000310,5.73e-08,10;UBERON:0010313,6.56e-08,10;UBERON:0002342,6.56e-08,10;UBERON:0005062,6.56e-08,10;UBERON:0001443,2.32e-07,11;UBERON:0005157,1.00e-06,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,1.47798971368783,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,7.25917999968424,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371807292777007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:37485037..37485044,+ | |||
}} |
Latest revision as of 13:28, 23 July 2015
Short description: | p@chr10:37485037..37485044, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:37485037..37485044, + |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
mast cell | 1.60e-14 | 5 |
basophil mast progenitor cell | 1.60e-14 | 5 |
endocrine cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 4.66e-66 | 1 |
right atrium valve | 4.66e-66 | 1 |
outflow tract of atrium | 4.66e-66 | 1 |
outflow part of right atrium | 4.66e-66 | 1 |
right cardiac atrium | 4.66e-66 | 1 |
cardiac atrium | 7.05e-34 | 2 |
atrioventricular valve | 7.05e-34 | 2 |
future cardiac atrium | 7.05e-34 | 2 |
valve | 4.09e-23 | 3 |
cardiac mesenchyme | 4.09e-23 | 3 |
cardiac chamber | 4.09e-23 | 3 |
cardial valve | 4.09e-23 | 3 |
tunica intima | 4.09e-23 | 3 |
heart layer | 4.09e-23 | 3 |
outflow tract | 4.09e-23 | 3 |
endocardium | 4.09e-23 | 3 |
endocardial cushion | 4.09e-23 | 3 |
presumptive endocardium | 4.09e-23 | 3 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
blood vessel layer | 9.89e-11 | 7 |
external ectoderm | 1.24e-09 | 8 |
breast | 5.73e-08 | 10 |
neural crest-derived structure | 6.56e-08 | 10 |
neural crest | 6.56e-08 | 10 |
neural fold | 6.56e-08 | 10 |
chest | 2.32e-07 | 11 |
epithelial fold | 1.00e-06 | 47 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.35e-18 | 4 |
breast cancer | 7.35e-18 | 4 |