FFCP PHASE1:Hg19::chr11:110001723..110001732,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=85463 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29362 | |||
|TSSclassifier=strong | |||
|UniProt=B4DR47 | |||
|association_with_transcript=0bp_to_ENST00000528673,uc010rwd.1_5end | |||
|cluster_id=chr11:110001723..110001732,+ | |||
|description=CAGE_peak_10_at_ZC3H12C_5end | |||
|id=chr11:110001723..110001732,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.39e-10!8;CL:0000221!6.60e-10!71;CL:0000133!2.43e-09!59;CL:0002319!5.96e-08!25;CL:0000540!2.90e-07!6;CL:0000031!2.90e-07!6;CL:0000404!2.90e-07!6;CL:0000240!4.74e-07!6;CL:0000311!4.74e-07!6;CL:0000079!4.74e-07!6;CL:0000237!4.74e-07!6;CL:0000036!4.74e-07!6;CL:0000357!4.74e-07!6;CL:0000114!4.74e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002319;7.54e-16;25!CL:0002605;1.13e-14;3!CL:0000123;3.94e-11;2!CL:0000242;3.94e-11;2!CL:0000047;3.51e-10;2!CL:0000312;3.06e-09;5!CL:0000540;6.44e-08;6!CL:0000404;6.44e-08;6!CL:0000240;9.10e-08;6!CL:0000311;9.10e-08;6!CL:0000079;9.10e-08;6!CL:0000237;9.10e-08;6!CL:0002144;5.60e-07;3!CL:0000064;9.62e-07;3!CL:0000067;9.62e-07;3!CL:0005012;9.62e-07;3!CL:0002304;9.62e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,7.19e-16,25;CL:0000047,7.59e-15,8;CL:0002605,1.16e-14,3;CL:0000133,5.28e-14,59;CL:0000221,1.45e-12,72;CL:0000242,3.94e-11,2;CL:0000312,3.19e-09,5;CL:0000540,6.52e-08,6;CL:0000031,6.52e-08,6;CL:0000404,6.52e-08,6;CL:0000240,9.43e-08,6;CL:0000311,9.43e-08,6;CL:0000079,9.43e-08,6;CL:0000237,9.43e-08,6;CL:0000036,9.43e-08,6;CL:0000357,9.43e-08,6;CL:0000114,9.43e-08,6;CL:0002144,5.12e-07,3;CL:0000064,7.58e-07,3;CL:0000067,7.58e-07,3;CL:0005012,7.58e-07,3;CL:0002304,7.58e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000133;1.06e-08;59!CL:0000031;6.44e-08;6!CL:0000357;9.10e-08;6!CL:0000114;9.10e-08;6!CL:0000221;3.69e-07;72 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.83e-14!94;UBERON:0001016!1.83e-14!94;UBERON:0001017!7.54e-14!82;UBERON:0005743!9.56e-13!86;UBERON:0000924!2.13e-11!173;UBERON:0006601!2.13e-11!173;UBERON:0002780!2.79e-11!41;UBERON:0001890!2.79e-11!41;UBERON:0006240!2.79e-11!41;UBERON:0004121!2.91e-11!169;UBERON:0003080!7.08e-11!42;UBERON:0001049!8.61e-11!57;UBERON:0005068!8.61e-11!57;UBERON:0006241!8.61e-11!57;UBERON:0007135!8.61e-11!57;UBERON:0003056!2.25e-10!61;UBERON:0002346!3.05e-09!90;UBERON:0002616!3.28e-09!59;UBERON:0003075!3.47e-09!86;UBERON:0007284!3.47e-09!86;UBERON:0001894!2.18e-08!7;UBERON:0006222!2.18e-08!7;UBERON:0000955!2.34e-08!69;UBERON:0006238!2.34e-08!69;UBERON:0003296!1.60e-07!4;UBERON:0010133!1.60e-07!4;UBERON:0002020!1.87e-07!34;UBERON:0003528!1.87e-07!34;UBERON:0000922!3.07e-07!612;UBERON:0002118!3.49e-07!5;UBERON:0004532!3.49e-07!5;UBERON:0001869!3.74e-07!32;UBERON:0002791!7.84e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.72e-11;4!UBERON:0010133;1.72e-11;4!UBERON:0000007;8.14e-11;2!UBERON:0002108;7.76e-09;4!UBERON:0000956;8.16e-08;25!UBERON:0000203;8.16e-08;25!UBERON:0002780;8.30e-08;41!UBERON:0001890;8.30e-08;41!UBERON:0010523;5.60e-07;3!UBERON:0001915;5.60e-07;3!UBERON:0002114;5.60e-07;2!UBERON:0001982;5.60e-07;3!UBERON:0000922;7.69e-07;49!UBERON:0001778;9.62e-07;3!UBERON:0001775;9.62e-07;3!UBERON:0001894;9.78e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.40e-12,89;UBERON:0003296,1.76e-11,4;UBERON:0010133,1.76e-11,4;UBERON:0004121,5.25e-11,171;UBERON:0000924,5.25e-11,171;UBERON:0006601,5.25e-11,171;UBERON:0000007,7.77e-11,2;UBERON:0001017,8.42e-11,81;UBERON:0003056,7.28e-10,61;UBERON:0002780,3.14e-09,41;UBERON:0001890,3.14e-09,41;UBERON:0003080,3.14e-09,41;UBERON:0006240,3.14e-09,41;UBERON:0002108,9.26e-09,4;UBERON:0000956,8.59e-08,25;UBERON:0000203,8.59e-08,25;UBERON:0010371,8.95e-08,104;UBERON:0002346,2.21e-07,86;UBERON:0010523,5.12e-07,3;UBERON:0001915,5.12e-07,3;UBERON:0001982,5.12e-07,3;UBERON:0002114,6.72e-07,2;UBERON:0001778,7.58e-07,3;UBERON:0001775,7.58e-07,3;UBERON:0000073,8.94e-07,53;UBERON:0002616,8.94e-07,53;UBERON:0001894,9.89e-07,7;UBERON:0006222,9.89e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,6.5834277040143,2.46373965131192,2.25976751270645,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60709189178915,0.665188192387692,1.31752178539689,0.0654895377488563,0,0,0,0,0,0,0,0,0.79504962946682,0,0.347140501607594,0,0,0.275118041940067,0.208994966536811,0,0,0.66944122552934,3.62546385398232,0,1.22031028774085,0,0.81014194788176,0,0,0,0,0,0.366403487860815,0,0,0,0,0,0,0,0,0,0,0,0,0.538842688278752,0.326923806226917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,1.7622379352613,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20725313949488,0,0.301586917234893,0.370353780634118,0,0,0,7.41954591840492,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,2.54094624222463,2.60279707715243,6.18631050222156,8.71084579738614,8.93114252314428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0.096670718292122,0.308097234229289,0,0,0,0,0,1.15741646340759,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0.276283915531148,0.251932747854276,0.20453736500431,0,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0,1.99613798001194,0,0,0,0,0,0,2.75794698593172,1.16641845353302,0,0,0.964771509003264,0,0,0,0,0,0,0,0,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,0,0.937057782901357,0,0,0,0,1.20990716048664,2.44858209304392,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,1.20116498503375,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0.795229689809303,0,0,0.412618309791701,0.415440338029185,0,0,0.0607495566580247,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0.25426853765475,0,0,0,0,1.55975789423744,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0,0,0,0,16.8600566090477,21.3033912057913,0,0,0,0,0,0,0,0,0,0.73927574994817,0,0,0.310525913752519,0,0,0,0,0,0.813741466409323,0.181848659202559,0.107410557042488,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,4.85998610953876,0.323474434190045,6.76243549980355,0.436838552768056,0,0,1.48722917110803,0,0,0,8.0057074828547,0,0,0.642292250964595,0,0,0,2.01657356977374,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0.261906694481422,0,0,0,0,0,0.0634158101939068,6.56369770821863,0,0,0,0,3.21421101526972,0.336283722218824,10.9253808762594,5.46389259243114,0.0887023701626388,0,0,0.135939465953663,0.0657727735628491,0,0,0,0.942693539496011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.2933363923326,8.7538341071002,0.118920090777569,0.11294608203896,0.219881033490858,1.20770274853339,0.308696632431779,3.27839340755936,0,0.245148321753905,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,1.10440093535229,0,3.49080552272302,1.0580536810308,0,0,0,0,5.02621631032999,0,0.101988829741982,0,0.0918948995348449,0,0.151557396436479,0.535928260312357,0,0.310298987585686,0,0.23806443146374,0,0.124149428591716,0,0,0,0,0,0,0.286888821570705,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@ZC3H12C | |||
}} |
Latest revision as of 01:25, 25 September 2015
Short description: | p10@ZC3H12C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_ZC3H12C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528673, uc010rwd.1_5end |
EntrezGene: | ZC3H12C |
HGNC: | 29362 |
UniProt: | B4DR47 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 7.19e-16 | 25 |
neuronal stem cell | 7.59e-15 | 8 |
astrocyte of the cerebral cortex | 1.16e-14 | 3 |
neurectodermal cell | 5.28e-14 | 59 |
ectodermal cell | 1.45e-12 | 72 |
Merkel cell | 3.94e-11 | 2 |
keratinocyte | 3.19e-09 | 5 |
neuron | 6.52e-08 | 6 |
neuroblast | 6.52e-08 | 6 |
electrically signaling cell | 6.52e-08 | 6 |
stratified squamous epithelial cell | 9.43e-08 | 6 |
keratin accumulating cell | 9.43e-08 | 6 |
stratified epithelial cell | 9.43e-08 | 6 |
keratinizing barrier epithelial cell | 9.43e-08 | 6 |
epithelial fate stem cell | 9.43e-08 | 6 |
stratified epithelial stem cell | 9.43e-08 | 6 |
surface ectodermal cell | 9.43e-08 | 6 |
capillary endothelial cell | 5.12e-07 | 3 |
ciliated cell | 7.58e-07 | 3 |
ciliated epithelial cell | 7.58e-07 | 3 |
multi-ciliated epithelial cell | 7.58e-07 | 3 |
non-pigmented ciliary epithelial cell | 7.58e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.40e-12 | 89 |
gland of diencephalon | 1.76e-11 | 4 |
neuroendocrine gland | 1.76e-11 | 4 |
ectoderm-derived structure | 5.25e-11 | 171 |
ectoderm | 5.25e-11 | 171 |
presumptive ectoderm | 5.25e-11 | 171 |
pituitary gland | 7.77e-11 | 2 |
central nervous system | 8.42e-11 | 81 |
pre-chordal neural plate | 7.28e-10 | 61 |
regional part of forebrain | 3.14e-09 | 41 |
forebrain | 3.14e-09 | 41 |
anterior neural tube | 3.14e-09 | 41 |
future forebrain | 3.14e-09 | 41 |
small intestine | 9.26e-09 | 4 |
cerebral cortex | 8.59e-08 | 25 |
pallium | 8.59e-08 | 25 |
ecto-epithelium | 8.95e-08 | 104 |
neurectoderm | 2.21e-07 | 86 |
microcirculatory vessel | 5.12e-07 | 3 |
endothelium of capillary | 5.12e-07 | 3 |
capillary | 5.12e-07 | 3 |
duodenum | 6.72e-07 | 2 |
ciliary epithelium | 7.58e-07 | 3 |
ciliary body | 7.58e-07 | 3 |
regional part of nervous system | 8.94e-07 | 53 |
regional part of brain | 8.94e-07 | 53 |
diencephalon | 9.89e-07 | 7 |
future diencephalon | 9.89e-07 | 7 |