FFCP PHASE1:Hg19::chr11:88071295..88071324,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1075 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2528 | |||
|TSSclassifier=strong | |||
|UniProt=P53634 | |||
|association_with_transcript=-340bp_to_ENST00000227266_5end | |||
|cluster_id=chr11:88071295..88071324,- | |||
|coexpression_cluster_id=C192 | |||
|description=CAGE_peak_5_at_CTSC_5end | |||
|id=chr11:88071295..88071324,- | |||
|ontology_enrichment_celltype=CL:0000766!3.96e-58!76;CL:0002009!3.03e-56!65;CL:0002057!4.09e-53!42;CL:0002194!2.91e-52!63;CL:0000576!2.91e-52!63;CL:0000040!2.91e-52!63;CL:0000559!2.91e-52!63;CL:0000557!1.47e-50!71;CL:0000860!6.05e-49!45;CL:0000839!1.29e-48!70;CL:0000763!1.87e-47!112;CL:0000049!1.87e-47!112;CL:0000738!5.92e-46!140;CL:0000037!2.22e-39!172;CL:0000566!2.22e-39!172;CL:0000988!6.03e-38!182;CL:0002087!3.37e-37!119;CL:0002032!1.72e-36!165;CL:0000837!1.72e-36!165;CL:0002031!5.18e-35!124;CL:0002393!1.35e-24!9;CL:0002397!1.35e-24!9;CL:0002320!5.44e-12!365;CL:0000094!5.48e-12!8;CL:0000134!8.64e-12!358;CL:0000081!2.89e-11!11;CL:0000840!1.94e-10!5;CL:0001029!1.94e-10!5;CL:0000219!1.65e-09!390;CL:0000990!1.89e-09!8;CL:0000875!2.48e-09!3;CL:0002396!2.48e-09!3;CL:0000775!4.47e-09!3;CL:0000767!6.81e-09!3;CL:0000842!1.09e-08!3;CL:0000451!1.34e-07!10;CL:0000048!2.01e-07!430;CL:0000080!3.31e-07!6;CL:0000723!3.94e-07!436;CL:0000034!9.36e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0002393;1.99e-46;6!CL:0002397;1.99e-46;6!CL:0000875;2.44e-33;3!CL:0002396;2.44e-33;3!CL:0000766;1.43e-17;69!CL:0000576;1.30e-16;48!CL:0000775;6.49e-16;3!CL:0000094;2.95e-13;8!CL:0000081;8.59e-10;11!CL:0000763;3.57e-07;100!CL:0000473;6.42e-07;39!CL:0000234;6.42e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.37e-77,9;CL:0002397,1.37e-77,9;CL:0000473,6.82e-37,48;CL:0000234,6.82e-37,48;CL:0000766,1.31e-36,72;CL:0000860,4.38e-36,42;CL:0002057,4.38e-36,42;CL:0000875,1.18e-33,3;CL:0002396,1.18e-33,3;CL:0002194,3.52e-29,59;CL:0000576,3.52e-29,59;CL:0000040,3.52e-29,59;CL:0000559,3.52e-29,59;CL:0002009,3.49e-28,61;CL:0000839,5.93e-26,66;CL:0000557,1.51e-25,67;CL:0000763,7.35e-24,108;CL:0000049,7.35e-24,108;CL:0000738,3.45e-21,136;CL:0000037,9.08e-17,168;CL:0002087,1.08e-16,115;CL:0000775,6.26e-16,3;CL:0000988,8.26e-16,177;CL:0002032,2.29e-15,161;CL:0000837,2.29e-15,161;CL:0002031,1.42e-13,120;CL:0000094,2.83e-13,8;CL:0000081,8.34e-10,11;CL:0000134,9.37e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.42e-23;42!CL:0000049;9.26e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.45e-53!102;UBERON:0003061!6.45e-53!102;UBERON:0002193!2.78e-51!112;UBERON:0002371!1.28e-43!80;UBERON:0001474!8.57e-40!86;UBERON:0002405!3.96e-35!115;UBERON:0004765!3.24e-32!101;UBERON:0001434!3.24e-32!101;UBERON:0003081!6.79e-19!216;UBERON:0002204!4.12e-16!167;UBERON:0002384!2.83e-11!375;UBERON:0000178!1.28e-07!15;UBERON:0000179!1.28e-07!15;UBERON:0000463!1.28e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.99e-23,98;UBERON:0003061,4.99e-23,98;UBERON:0002371,2.34e-22,76;UBERON:0002193,9.83e-21,108;UBERON:0001474,1.29e-20,82;UBERON:0004765,1.20e-18,90;UBERON:0002405,5.40e-18,93;UBERON:0001434,1.27e-16,100;UBERON:0003081,4.19e-10,203;UBERON:0002204,3.00e-09,167 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0.786728553697808,0.383829398097213,2.47705797305722,0,0,0,0,0,0,1.10799081706375,9.6261334785668,0.868043482863407,0.223915474239924,0,0.257575567634187,0.290796477559129,0,0.727752183563449,0.464858073811369,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,0,1.29096936716765,2.70852973188684,0.752969358170419,0,0.224723484445085,0.306083892370903,0,0,0.659702600373432,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0,0.65156653411535,0,0,0.632924774881769,1.69004229049553,2.12604299965044,2.09658645508376,0.561643155732475,1.20141514273205,1.12507910687956,1.42506371870624,1.79025009479181,1.64397738388171,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.97364218096405,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,1.49801404789436,8.97484377612075,0.414415513436035,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.72571360654893,0.960548020230999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70894156152249,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828478110694391,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.187967835959707,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@CTSC | |||
}} |
Latest revision as of 23:47, 24 September 2015
Short description: | p5@CTSC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CTSC_5end |
Coexpression cluster: | C192_Neutrophils_CD14_Peripheral_Eosinophils_CD8_Natural_CD4 |
Association with transcript: | -340bp_to_ENST00000227266_5end |
EntrezGene: | CTSC |
HGNC: | 2528 |
UniProt: | P53634 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.37e-77 | 9 |
CD14-positive, CD16-positive monocyte | 1.37e-77 | 9 |
defensive cell | 6.82e-37 | 48 |
phagocyte | 6.82e-37 | 48 |
myeloid leukocyte | 1.31e-36 | 72 |
classical monocyte | 4.38e-36 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.38e-36 | 42 |
non-classical monocyte | 1.18e-33 | 3 |
CD14-low, CD16-positive monocyte | 1.18e-33 | 3 |
monopoietic cell | 3.52e-29 | 59 |
monocyte | 3.52e-29 | 59 |
monoblast | 3.52e-29 | 59 |
promonocyte | 3.52e-29 | 59 |
macrophage dendritic cell progenitor | 3.49e-28 | 61 |
myeloid lineage restricted progenitor cell | 5.93e-26 | 66 |
granulocyte monocyte progenitor cell | 1.51e-25 | 67 |
myeloid cell | 7.35e-24 | 108 |
common myeloid progenitor | 7.35e-24 | 108 |
leukocyte | 3.45e-21 | 136 |
hematopoietic stem cell | 9.08e-17 | 168 |
nongranular leukocyte | 1.08e-16 | 115 |
neutrophil | 6.26e-16 | 3 |
hematopoietic cell | 8.26e-16 | 177 |
hematopoietic oligopotent progenitor cell | 2.29e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.29e-15 | 161 |
hematopoietic lineage restricted progenitor cell | 1.42e-13 | 120 |
granulocyte | 2.83e-13 | 8 |
blood cell | 8.34e-10 | 11 |
mesenchymal cell | 9.37e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.99e-23 | 98 |
blood island | 4.99e-23 | 98 |
bone marrow | 2.34e-22 | 76 |
hemolymphoid system | 9.83e-21 | 108 |
bone element | 1.29e-20 | 82 |
skeletal element | 1.20e-18 | 90 |
immune system | 5.40e-18 | 93 |
skeletal system | 1.27e-16 | 100 |
lateral plate mesoderm | 4.19e-10 | 203 |
musculoskeletal system | 3.00e-09 | 167 |