FFCP PHASE1:Hg19::chr12:54694758..54694805,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4778 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7780 | |||
|TSSclassifier=strong | |||
|UniProt=A8K3E0,Q16621 | |||
|association_with_transcript=0bp_to_ENST00000553070,NM_001136023,uc001sfr.3,uc009znl.2_5end | |||
|cluster_id=chr12:54694758..54694805,- | |||
|coexpression_cluster_id=C802 | |||
|description=CAGE_peak_1_at_NFE2_5end | |||
|id=chr12:54694758..54694805,- | |||
|ontology_enrichment_celltype=CL:0000763!1.33e-41!112;CL:0000049!1.33e-41!112;CL:0000037!2.72e-30!172;CL:0000566!2.72e-30!172;CL:0002032!4.46e-29!165;CL:0000837!4.46e-29!165;CL:0000988!1.12e-27!182;CL:0000766!6.91e-26!76;CL:0000860!8.23e-23!45;CL:0000839!1.70e-22!70;CL:0002057!1.76e-22!42;CL:0000557!2.92e-20!71;CL:0002194!1.18e-18!63;CL:0000576!1.18e-18!63;CL:0000040!1.18e-18!63;CL:0000559!1.18e-18!63;CL:0002009!3.28e-17!65;CL:0000738!3.54e-14!140;CL:0002031!9.94e-13!124;CL:0002087!1.71e-11!119;CL:0002320!3.23e-09!365;CL:0000134!1.97e-08!358 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.12e-22;33!CL:0002057;4.12e-22;33!CL:0000763;1.82e-19;100!CL:0000576;1.38e-18;48!CL:0000766;5.88e-16;69!CL:0000473;3.25e-15;39!CL:0000234;3.25e-15;39!CL:0000094;2.29e-08;8!CL:0000988;1.50e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,2.79e-60,108;CL:0000049,2.79e-60,108;CL:0000037,8.77e-44,168;CL:0002032,1.86e-41,161;CL:0000837,1.86e-41,161;CL:0000988,6.01e-41,177;CL:0000766,7.92e-36,72;CL:0000860,2.94e-31,42;CL:0002057,2.94e-31,42;CL:0000839,5.64e-31,66;CL:0000557,1.96e-28,67;CL:0000473,2.59e-26,48;CL:0000234,2.59e-26,48;CL:0002194,1.79e-25,59;CL:0000576,1.79e-25,59;CL:0000040,1.79e-25,59;CL:0000559,1.79e-25,59;CL:0002009,4.89e-24,61;CL:0000738,2.32e-20,136;CL:0002031,5.05e-17,120;CL:0002087,4.50e-15,115;CL:0002320,5.58e-12,361;CL:0000134,3.63e-11,354;CL:0000219,4.80e-09,386;CL:0002393,2.07e-08,9;CL:0002397,2.07e-08,9;CL:0000094,2.49e-08,8;CL:0000034,5.46e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-22;42!CL:0000049;6.08e-17;108 | |||
|ontology_enrichment_disease=DOID:8692!2.02e-20!31;DOID:1240!1.62e-15!39;DOID:2531!7.31e-09!51;DOID:0060083!7.31e-09!51;DOID:1036!8.02e-07!8 | |||
|ontology_enrichment_disease_v019=DOID:8692;2.18e-27;31!DOID:1240;1.27e-17;39!DOID:2531;4.09e-10;51!DOID:0060083;4.09e-10;51!DOID:1036;4.94e-09;8 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.51e-28,31;DOID:1240,1.61e-22,39;DOID:2531,4.41e-15,51;DOID:0060083,4.41e-15,51;DOID:1036,4.97e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.03e-24!102;UBERON:0003061!1.03e-24!102;UBERON:0002193!2.50e-20!112;UBERON:0002371!3.77e-20!80;UBERON:0001474!2.47e-19!86;UBERON:0004765!1.01e-17!101;UBERON:0001434!1.01e-17!101;UBERON:0002405!7.88e-14!115;UBERON:0002384!1.96e-09!375;UBERON:0002204!4.36e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.75e-09;15!UBERON:0000179;1.75e-09;15!UBERON:0000463;1.75e-09;15!UBERON:0002390;5.18e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.67e-34,98;UBERON:0003061,9.67e-34,98;UBERON:0002193,3.01e-29,108;UBERON:0002371,6.36e-26,76;UBERON:0004765,1.53e-24,90;UBERON:0001474,1.57e-24,82;UBERON:0001434,1.36e-21,100;UBERON:0002405,1.94e-21,93;UBERON:0002384,1.83e-11,371;UBERON:0000178,1.76e-09,15;UBERON:0000179,1.76e-09,15;UBERON:0000463,1.76e-09,15;UBERON:0002204,4.54e-09,167;UBERON:0003081,2.22e-07,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,3.21792517696121,3.31397375727916,0,0,0,0.975865597581014,0.861847406537515,0,2.5076377718247,0,0,0,0,0.0821005894499457,0,22.8151280572364,11.1310525448192,12.0756576186539,0,0,0,0,0,67.5281010470149,12.7418943962332,11.8321224007384,18.2289131401316,0.895661896959697,0.32389366601898,0.515151135268373,36.6403561724503,13.9814099164859,27.8971670365989,9.29716147622739,4.93401465626191,7.12324653058738,8.63077176966451,7.68482119587302,7.09446689665756,9.3081333798887,12.2642089880927,12.1883837934908,13.5534484470675,6.82265375144614,4.94391665779186,8.87643287875617,5.45579346029359,9.59005688698562,34.3045352194185,18.949047474055,26.425934533027,6.67481248845743,8.5107783703671,3.11411124497787,12.5624332628372,11.4726242052444,6.95004303056373,4.23779651843358,5.52416453981347,6.0127853613768,32.3220588057271,23.5990772961198,25.3686961065135,95.2546792122278,78.9930456346323,79.7198910017517,9.9754460309437,14.9187507899318,12.2384983022305,3.51992488922645,3.27683166757279,0,6.82768356106412,0.800791974072025,2.29900975981793,3.96626923670917,0.954053754535364,0,0.587237189370939,0,22.4691258584344,11.2101712596307,97.1887272820034,0,0.393010762749165,0.205601498999509,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,1.59282707162048,0.651083453856419,0,3.76437797694432,2.30375900077953,2.49861453104692,8.52398107358461,0,0.201606743224732,0.267440195783507,0.144824403882799,2.43806866313962,0.670700859703636,0,0,0.50133791063589,0.579386075843295,0,0,0.378139268656271,0,0.087834785693126,1.11332214173056,0,0,10.0609692032952,12.7114708228465,7.97747763113191,0.238490624305342,0,1.11437250398869,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,22.4026709641308,50.4114343392823,0,0.993943903390637,0.12663051166458,0,0,0,2.80338800071154,0,0.74000264525148,0,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0,1.02077085627447,0.61417158655884,0.619954687054593,2.37600571456411,0.247266929278557,0,0,0.168336113954066,0.125118519871964,0,0,0.612975591598039,0.300476117813194,0,0,0.213557388818567,1.05965950579781,0.300091096084402,0.309157587715317,0.515281080091258,0.744467425326359,0,0,0,0.644349290496095,1.13152239773168,1.06502877754984,0.201504196455281,0.508681776931463,0.193260853163297,0,0,0.487894824518382,1.19276791489337,2.09149097165133,1.14027160516907,2.52320850875628,2.55484151353081,1.56449532329816,0,0,0,0,0.236613600079688,0.337169380156203,0,0.110293972732394,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0.983907508344908,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.34779121492523,0,0,0,0,0,1.71697232418975,0,0,0.148631162288728,0,0.16798212819886,0.283550194484773,0,0,0,13.7945706610864,89.8094026934906,13.2689993946094,12.3943159938587,4.4184851699233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771622122786426,0,0.799266537048298,0,0.542621605391443,0,0,0,0,0,0,0,1.2162378064119,0,0,0,1.14861935834114,0,0,0,0,0,0.985153801009636,0,1.02674429023799,0,0,0,0,0,72.6536813228767,140.605885825892,181.513994884984,4.2942022101699,28.5097197004016,0.271265023699736,2.07970861530807,2.85486382075459,2.52323864054295,3.27995961979597,0.902838299183157,0,0,0,0.921845842708516,1.47702144595741,0.587403472388222,0,15.9211380114623,18.9828496720383,11.526576242772,0,0,0,0,0,0.280660094433074,0.128139149255701,0,0.160853921143607,0,0.154209693802656,0,0.328508624055237,1.03850885836724,0.232420756919918,0.483437798366489,0,0,1.03333003348146,0.182091168006717,0.393373244878272,0.451199612907412,0.0770153371044148,0,1.46139224653261,0.211103257785751,0,0,0,0,0.541892875087706,1.00337954770971,0,0.831076008928724,0.223874754722178,122.785530921723,120.783178373504,0.256450125116389,0.656029291399411,0,4.43076350085206,0.27470839445503,0.330037999682352,0,0.650060246036521,0,0.096670718292122,0.308097234229289,0.767518373630648,0,3.22260734604821,5.51063436874068,0.255679882248303,0.534192213880424,0.165284915360978,0.384380134730212,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0.855877976067841,1.27281299170375,0,0.719489830333259,1.64722217841633,0.706874414074119,0,0,0,0,0,0,0.136499911407986,0,0,0.551365343546124,0,0,5.78775534266688,2.62357900818653,0,0,0,0,0,0,0,4.01104507065562,2.96365403663912,0.379473173765715,0,0.0962221127255121,0,0,4.0481834334015,0,0,0,0,277.573842249997,268.387659706974,340.649017930149,159.138826005803,197.453891081373,304.782456260577,218.712732081436,302.180692168117,10.8960552550023,0,0,0,0,0,0.637705090915289,44.1070410866525,77.5596749036085,64.983789896232,2.59697552219644,181.956571417521,8.21644844519492,29.2991405095553,100.253790836027,67.7167111206413,49.6217152070432,69.2172995665293,65.1544743666199,91.7159270497892,8.29550063632837,10.9601292867284,8.84300451073115,60.7656976700345,90.2036003420585,226.480814063791,89.5208295755504,32.6410528637864,590.73555131809,0,0.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| |||
|short_description=p1@NFE2 | |||
}} |
Latest revision as of 05:45, 19 September 2015
Short description: | p1@NFE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NFE2_5end |
Coexpression cluster: | C802_acute_Whole_chronic_blood_leukemia_Neutrophils_CD34 |
Association with transcript: | 0bp_to_ENST00000553070, NM_001136023, uc001sfr.3, uc009znl.2_5end |
EntrezGene: | NFE2 |
HGNC: | 7780 |
UniProt: | A8K3E0Q16621 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 2.79e-60 | 108 |
common myeloid progenitor | 2.79e-60 | 108 |
hematopoietic stem cell | 8.77e-44 | 168 |
hematopoietic oligopotent progenitor cell | 1.86e-41 | 161 |
hematopoietic multipotent progenitor cell | 1.86e-41 | 161 |
hematopoietic cell | 6.01e-41 | 177 |
myeloid leukocyte | 7.92e-36 | 72 |
classical monocyte | 2.94e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.94e-31 | 42 |
myeloid lineage restricted progenitor cell | 5.64e-31 | 66 |
granulocyte monocyte progenitor cell | 1.96e-28 | 67 |
defensive cell | 2.59e-26 | 48 |
phagocyte | 2.59e-26 | 48 |
monopoietic cell | 1.79e-25 | 59 |
monocyte | 1.79e-25 | 59 |
monoblast | 1.79e-25 | 59 |
promonocyte | 1.79e-25 | 59 |
macrophage dendritic cell progenitor | 4.89e-24 | 61 |
leukocyte | 2.32e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 5.05e-17 | 120 |
nongranular leukocyte | 4.50e-15 | 115 |
connective tissue cell | 5.58e-12 | 361 |
mesenchymal cell | 3.63e-11 | 354 |
motile cell | 4.80e-09 | 386 |
intermediate monocyte | 2.07e-08 | 9 |
CD14-positive, CD16-positive monocyte | 2.07e-08 | 9 |
granulocyte | 2.49e-08 | 8 |
stem cell | 5.46e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.67e-34 | 98 |
blood island | 9.67e-34 | 98 |
hemolymphoid system | 3.01e-29 | 108 |
bone marrow | 6.36e-26 | 76 |
skeletal element | 1.53e-24 | 90 |
bone element | 1.57e-24 | 82 |
skeletal system | 1.36e-21 | 100 |
immune system | 1.94e-21 | 93 |
connective tissue | 1.83e-11 | 371 |
blood | 1.76e-09 | 15 |
haemolymphatic fluid | 1.76e-09 | 15 |
organism substance | 1.76e-09 | 15 |
musculoskeletal system | 4.54e-09 | 167 |
lateral plate mesoderm | 2.22e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.51e-28 | 31 |
leukemia | 1.61e-22 | 39 |
hematologic cancer | 4.41e-15 | 51 |
immune system cancer | 4.41e-15 | 51 |
chronic leukemia | 4.97e-09 | 8 |