FFCP PHASE1:Hg19::chr12:57472487..57472498,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23306 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29001 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=75bp_to_uc010sra.1_5end | |||
|cluster_id=chr12:57472487..57472498,- | |||
|description=CAGE_peak_3_at_TMEM194A_5end | |||
|id=chr12:57472487..57472498,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;2.37e-10;2!CL:1000398;2.37e-10;2!CL:0002567;2.55e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,1.89e-10,2;CL:1000398,1.89e-10,2;CL:0002567,3.35e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!2.35e-15!239;DOID:162!3.34e-15!235;DOID:0060058!2.93e-09!10;DOID:0050687!1.92e-08!143;DOID:0050686!2.16e-08!137;DOID:2531!6.00e-07!51;DOID:0060083!6.00e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:0060060;2.47e-19;1!DOID:3371;2.47e-19;1!DOID:4549;2.47e-19;1!DOID:5861;2.47e-19;1!DOID:0060061;2.47e-19;1!DOID:6496;2.47e-19;1!DOID:8691;2.47e-19;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,1.08e-19,1;DOID:4549,1.08e-19,1;DOID:5861,1.08e-19,1;DOID:6496,1.08e-19,1;DOID:0060060,3.91e-19,1;DOID:0060061,3.91e-19,1;DOID:8691,3.91e-19,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.37e-10;2!UBERON:0003497;2.37e-10;2!UBERON:0003909;2.37e-10;2!UBERON:0003835;2.37e-10;2!UBERON:0002331;3.62e-08;10!UBERON:0002418;2.55e-07;3!UBERON:0004755;2.55e-07;3!UBERON:0001280;2.55e-07;3!UBERON:0004647;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,1.89e-10,2;UBERON:0003497,1.89e-10,2;UBERON:0003909,1.89e-10,2;UBERON:0003835,1.89e-10,2;UBERON:0002331,3.37e-08,10;UBERON:0000358,3.37e-08,10;UBERON:0000307,3.37e-08,10;UBERON:0000091,3.37e-08,10;UBERON:0000087,3.37e-08,10;UBERON:0007010,3.37e-08,10;UBERON:0007806,3.37e-08,10;UBERON:0008780,3.37e-08,10;UBERON:0005728,3.37e-08,10;UBERON:0002418,1.93e-07,3;UBERON:0004755,1.93e-07,3;UBERON:0001280,2.19e-07,3;UBERON:0004647,2.19e-07,3;UBERON:0005171,2.19e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0.487932798790507,0,0,0,0,0.136874425072884,0.251085279189606,0.458480434487708,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0.232401601740905,0.426507697462265,0,0,0,0.434021741431704,0.223915474239924,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0.25618263945135,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0.174129737299267,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0.312160076830321,0,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0.309157587715317,0,0,0.506328996723799,0.389748020644795,0,0.0920498986422993,0,0.355009592516614,0.403008392910561,0.339121184620975,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.473227200159376,0.505754070234305,0,0,0.217879444092406,0,0.539325232640658,0.392442930250692,0,1.4763109092493,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0.0895585227028483,0,0,0.985326475791887,0.176096868026452,0,0,0.12624243342638,0.507983154337352,0,1.17217447210047,0,0.102827492703324,0.901029173531752,0,0,0,0.2933531432838,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.537182889719687,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0.511707249066704,0,0,0.154209693802656,0,0.164254312027618,0.519254429183621,0.232420756919918,0,0,0,0.34444334449382,0,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0.438519753291869,0,0.256450125116389,0,0,0,0.457847324091717,0.495056999523528,0,0,0,0,0.308097234229289,0.15350367472613,0,0,0,0.340906509664404,0.178064071293475,0,0,0.127612712494584,0,0,0,0,0,0,0.869932992075073,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0.557409525377156,0.144269212976445,0.924843963529383,0.318852545457645,0,0,0.423347165447766,0,0,0.456469358066384,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0,0,0.19538809540204,0,0,0,0.33307196799782,0,0,0,0.36408156524854,0.557216921387392,0.568272293612826,0,0,0,0,0,0,0.329607748453519,2.11125408127993,0,0,0,0,0.492339221844278,0,0.0898683511473268,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0.1137934482855,0.254253650292766,0.472775363535873,0.344743373241465,0.291604613383254,0.694499979733169,0,0,0,0,0,0,0,0.139423744278603,0,0.113942055847001,0,0,0,0,0.0915975934018623,0,0,0.156980256395025,0,0.451191321234361,0.392125068635479,0,0,0.158936578980379,0,0,0,0.216388639742091,0,0,0,0.593042257361244,1.35920332841153,1.35748534357092,0,0,0,0.729819156862664,0,0.242780379534093,0,1.20990716048664,0,0,0.751617097072463,0.414752765588989,0,0,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0.0870592065804026,0,0.859930162358083,0,0.0730893170861856,0.246346371159628,0,1.76512253383001,0,0.137041924646751,0.19871461170299,0,0.195551382734803,0.0801588202515337,0,0.19980960958213,0,0.80175617316141,0.171594997861965,0,0,0.235694034616795,0.407712618220842,0.418411385249333,0,0,0,0,0,0,1.31443677139657,0,0,0,0.399358000997982,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0.415440338029185,0.2249738915515,0.77380195455795,0,0.670869375198532,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0.164185041498678,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243585196761792,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0,0,0,0.454947352624943,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0.318593534327405,0,0,0,0,0,0,0,0.813741466409323,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0.38582807654183,0.168942440653073,0,0,0,0,0.194860308839388,0.265729680626726,0,0.327609848846413,0,0.211312123358627,1.19992437512958,0,0,0,0.552317850755522,0,0,0,0.862598491173454,0,0.109209638192014,0.33946505990805,0,0.247871528518004,0,0.318004350653419,1.49837315502381,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.183428598521679,0,0,0,0.198916222116275,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0.115233987555779,0,0,0,0.118193840883968,0,0,0,0,0,0,0.47775168788705,0,0.47404083519818,0.116241425368125,0.347716544605159,0,0.207216164163037,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0.233939463462106,0,0.713520544665411,0.22589216407792,0.109940516745429,0.150962843566674,0,0,0,0,0,0,0,0,0,0.0939839179798536,0.193373663920732,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.109265571963696,0.380095503034311,0,0,0,0,0.151557396436479,0,0,0,0,0,0.193766729508018,0.434523000071005,0.112131862580613,0,0,0,0,0,0,0,0.162806537221949,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p3@TMEM194A | |||
}} |
Latest revision as of 12:42, 19 September 2015
Short description: | p3@TMEM194A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM194A_5end |
Coexpression cluster: | NA |
Association with transcript: | 75bp_to_uc010sra.1_5end |
EntrezGene: | TMEM194A |
HGNC: | 29001 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 1.89e-10 | 2 |
endothelial cell of hepatic sinusoid | 1.89e-10 | 2 |
light melanocyte | 3.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 1.89e-10 | 2 |
abdomen blood vessel | 1.89e-10 | 2 |
sinusoid | 1.89e-10 | 2 |
abdominal segment blood vessel | 1.89e-10 | 2 |
umbilical cord | 3.37e-08 | 10 |
blastocyst | 3.37e-08 | 10 |
blastula | 3.37e-08 | 10 |
bilaminar disc | 3.37e-08 | 10 |
inner cell mass | 3.37e-08 | 10 |
cleaving embryo | 3.37e-08 | 10 |
connecting stalk | 3.37e-08 | 10 |
inner cell mass derived epiblast | 3.37e-08 | 10 |
extraembryonic mesoderm | 3.37e-08 | 10 |
cartilage tissue | 1.93e-07 | 3 |
skeletal tissue | 1.93e-07 | 3 |
liver parenchyma | 2.19e-07 | 3 |
liver lobule | 2.19e-07 | 3 |
hepatic duct | 2.19e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 1.08e-19 | 1 |
extraosseous chondrosarcoma | 1.08e-19 | 1 |
myxoid chondrosarcoma | 1.08e-19 | 1 |
extraskeletal myxoid chondrosarcoma | 1.08e-19 | 1 |
non-Hodgkin lymphoma | 3.91e-19 | 1 |
cutaneous T cell lymphoma | 3.91e-19 | 1 |
mycosis fungoides | 3.91e-19 | 1 |