FFCP PHASE1:Hg19::chr12:69958036..69958041,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:69958036..69958041,+ | |||
|description=CAGE_peak_at_chr12:69958036..69958041,+ | |||
|id=chr12:69958036..69958041,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002569;6.78e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,7.25e-08,6 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.91e-41;1!UBERON:0003056;1.40e-14;3!UBERON:0006215;1.83e-14;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;5.69e-21;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,4.66e-21,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.91e-41;1!UBERON:0001785;9.91e-41;1!UBERON:0002464;9.91e-41;1!UBERON:0004904;9.91e-41;1!UBERON:0001021;9.91e-41;1!UBERON:0003714;3.81e-21;2!UBERON:0005162;3.81e-21;2!UBERON:0000122;3.81e-21;2!UBERON:0004732;3.22e-13;13!UBERON:0002037;6.78e-08;6!UBERON:0003422;6.78e-08;6!UBERON:0003104;6.04e-07;7!UBERON:0009142;6.04e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,9.91e-41,1;UBERON:0001785,9.91e-41,1;UBERON:0002464,9.91e-41,1;UBERON:0004904,9.91e-41,1;UBERON:0001021,9.91e-41,1;UBERON:0003902,9.91e-41,1;UBERON:0005425,9.91e-41,1;UBERON:0003714,3.81e-21,2;UBERON:0005162,3.81e-21,2;UBERON:0000122,3.81e-21,2;UBERON:0004732,3.22e-13,13;UBERON:0001781,2.80e-11,4;UBERON:0000966,5.92e-08,6;UBERON:0005388,5.92e-08,6;UBERON:0001802,5.92e-08,6;UBERON:0002037,6.78e-08,6;UBERON:0006215,6.78e-08,6;UBERON:0003422,7.25e-08,6 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0.232401601740905,0,0,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0.464858073811369,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0,0.502497330513487,0,0,0,0,0,0.211255286311942,0,0.209658645508376,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0,0.167186495390678,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.534880391567015,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0.515281080091258,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,1.14861935834114,0,0.289562613335158,0,0,0.112085143993527,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.206082023295445,0.183138929636687,0,0,0,0,0,0,0.307007349452259,0,0,0.290033387828457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0.156679895773023,0,0,0,0,0,0.343505344755765,0.307240764308458,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0.23874448473769,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0.755798243562828,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0.689486746482929,0.291604613383254,0.173624994933292,0,0,1.52581736317083,0.110579259931225,0,0,0,0,0.153900517007594,0,0.69169171316418,0.0897576444097721,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0.210998064528027,0,0,0.216388639742091,0,0,0.611030144933625,0,0.123563938946503,0,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,0,0.313932918407225,0,0,0.138674673013139,0.173559738335131,0,0.174118413160805,0.17472666824203,0.171986032471617,0,0,0,0,0,0,0,0,0,0,0,0,0.19980960958213,0.144090417154106,0,0.514784993585894,0,0.124252535565433,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0.199679000498991,0,0,0,0,0,0,0,0.13480708770837,0.0984274815147488,0,0,0,0.160753148465019,0,0.415440338029185,0.2249738915515,0.77380195455795,0,0,0.236417121897595,0.0524545881349981,0.105600336519406,0,0,0,0,0.25426853765475,0,0,0,0,0,0.170388021785422,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0.592834895693833,0,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0.0620964029413835,0,0,0,0.285465333544967,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0.308801447160972,0,0,0,0,0.256241518587947,0,0,0.138258436151731,0.389720617678777,0,0.163565394255844,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0.218419276384028,0,0.425149840203366,0.619678821295011,0,0,0,0,0,0.3062454773532,0,0,0.319267718114302,0,0.252071696221718,0,0,2.85538840518309,0.0981477185010256,0.11796972334774,0.183428598521679,0,0,0,0.198916222116275,0,0,0,0.523813388962845,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0.606965604236632,0,0.0887023701626388,0,0.171488009437418,0.135939465953663,0,0.118193840883968,0.111231401892069,0,0,0,0.913158720509496,0,0,0,0,0.116241425368125,3.12944890144643,0,0.207216164163037,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0.121917924982269,0.647428837187895,0,0,0,0,0.397901550322736,0,0,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0.297046400327086,0,0,0,0,0.0999411559249289,0,0,0.0802413666891683,0,0,0,0.315543124386369,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0.253397002022874,0.101988829741982,0,0.0918948995348449,0,0,0.267964130156178,0,0.103432995861895,0,0.23806443146374,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0.202117188958219,0,0,0,0,0,0,0.106727345877715,1.9307228228694,0.0898252021065869,0,0,0.406896178315738,0,0,0.320568492303233 | |||
|short_description=p@chr12:69958036..69958041,+ | |||
}} |
Latest revision as of 11:56, 24 July 2015
Short description: | p@chr12:69958036..69958041, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:69958036..69958041, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 9.91e-41 | 1 |
cranial nerve | 9.91e-41 | 1 |
nerve trunk | 9.91e-41 | 1 |
nerve connecting eye with brain | 9.91e-41 | 1 |
nerve | 9.91e-41 | 1 |
retinal neural layer | 9.91e-41 | 1 |
presumptive neural retina | 9.91e-41 | 1 |
neural tissue | 3.81e-21 | 2 |
multi cell component structure | 3.81e-21 | 2 |
neuron projection bundle | 3.81e-21 | 2 |
segmental subdivision of nervous system | 3.22e-13 | 13 |
layer of retina | 2.80e-11 | 4 |
retina | 5.92e-08 | 6 |
photoreceptor array | 5.92e-08 | 6 |
posterior segment of eyeball | 5.92e-08 | 6 |
cerebellum | 6.78e-08 | 6 |
rhombic lip | 6.78e-08 | 6 |
mesenchyme of umbilical cord | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
teratoma | 4.66e-21 | 2 |