FFCP PHASE1:Hg19::chr14:71788491..71788517,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=13bp_to_ENST00000555771_5end | |||
|cluster_id=chr14:71788491..71788517,- | |||
|description=CAGE_peak_2_at_ENST00000555771_5end | |||
|id=chr14:71788491..71788517,- | |||
|ontology_enrichment_celltype=CL:0000192!4.27e-11!42;CL:0000514!4.27e-11!42;CL:0000359!4.44e-11!32;CL:0000055!1.94e-08!180;CL:0000680!5.41e-07!57;CL:0000056!5.41e-07!57;CL:0000355!5.41e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;5.72e-16;32!CL:0000192;9.76e-12;43!CL:0002620;3.90e-10;23!CL:0002539;1.13e-07;10!CL:0000187;9.02e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.09e-17,32;CL:0000192,2.91e-15,43;CL:0000514,2.91e-15,43;CL:0002620,1.93e-10,23;CL:0000187,1.94e-10,55;CL:0000680,1.46e-09,58;CL:0000056,1.46e-09,58;CL:0000355,1.46e-09,58;CL:0000393,8.81e-09,61;CL:0000211,8.81e-09,61;CL:0002539,6.63e-08,10;CL:0000057,7.76e-08,76 | |||
|ontology_enrichment_development_v019=CL:0000514;9.76e-12;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.96e-07;5!DOID:450;1.96e-07;5!DOID:66;1.96e-07;5!DOID:423;1.96e-07;5!DOID:0080000;1.96e-07;5!DOID:11722;1.96e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.03e-07,5;DOID:450,1.03e-07,5;DOID:66,1.03e-07,5;DOID:423,1.03e-07,5;DOID:0080000,1.03e-07,5;DOID:11722,1.03e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004573!1.94e-07!33;UBERON:0004571!1.94e-07!33;UBERON:0001637!5.78e-07!42;UBERON:0003509!5.78e-07!42;UBERON:0004572!5.78e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.59e-12;33!UBERON:0004571;1.59e-12;33!UBERON:0001637;8.25e-10;42!UBERON:0003509;8.25e-10;42!UBERON:0004572;8.25e-10;42!UBERON:0001737;5.66e-08;9!UBERON:0001557;5.66e-08;9!UBERON:0004237;1.13e-07;10!UBERON:0004695;1.13e-07;10!UBERON:0002111;1.13e-07;10!UBERON:0004178;1.13e-07;10!UBERON:0001135;2.10e-07;15!UBERON:0003104;9.88e-07;7!UBERON:0009142;9.88e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,4.51e-15,33;UBERON:0004571,4.51e-15,33;UBERON:0001637,5.28e-13,42;UBERON:0003509,5.28e-13,42;UBERON:0004572,5.28e-13,42;UBERON:0007500,3.39e-10,59;UBERON:0001981,3.39e-10,59;UBERON:0004537,3.39e-10,59;UBERON:0006965,3.39e-10,59;UBERON:0001134,1.54e-08,62;UBERON:0002036,1.54e-08,62;UBERON:0003082,1.54e-08,62;UBERON:0002385,4.44e-08,64;UBERON:0001015,4.44e-08,64;UBERON:0000383,4.44e-08,64;UBERON:0000055,5.55e-08,68;UBERON:0001737,6.06e-08,9;UBERON:0004237,6.63e-08,10;UBERON:0004695,6.63e-08,10;UBERON:0002111,6.63e-08,10;UBERON:0004178,6.63e-08,10;UBERON:0001135,2.20e-07,15;UBERON:0004872,2.32e-07,83;UBERON:0007524,3.40e-07,73;UBERON:0002049,7.97e-07,78;UBERON:0007798,7.97e-07,78 | |||
|phase1_expression=1.09007027562334,0,0.845726424575827,7.00513088471913,0.893922188854576,0.872338524100369,0,0,0,1.22866968250754,0.697801167972428,0,0.263766978228454,0.990130823680373,0.662794751455832,2.6893005858071,3.61616716814386,2.92124036154949,3.90346239032406,0.246242116153576,0.204000691244253,0.626909442956176,0.572471974262113,0.273748850145768,0.376627918784408,0,0.0821005894499457,0.157421562627358,0.393364276848904,0,0.619264493264304,0.919421224478927,0.6024118375565,0,0,0,0,1.66198622559563,0.401088894940283,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.863077176966451,0,0.47296445977717,0.344745680736619,0,1.35426486594342,0.188242339542605,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0.605399502633369,0,0.316462387440884,0.211255286311942,0.212604299965044,0.838634582033504,0.44931452458598,0.450530678524519,0.16072558669708,0.570025487482497,0.39783335439818,0.365328307529268,3.51992488922645,0,0.889509253863555,0.426730222566507,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0,0.296573126324121,0,0,0,0.766440987203842,0.34362744548263,0,0,0,0,0,0,0,0,0.821127996921047,0.201606743224732,0,0.289648807765598,0,0,0.383587685530591,0.361439152384566,2.00535164254356,2.31754430337318,1.5905718941022,0.486634870302636,0.0945348171640679,0.221729397462564,0,0.458426764241994,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,1.13967460498122,0.794455084879313,1.72101972449288,1.06400514659507,0.560677600142307,0,1.97334038733728,0,0,0.490385709340376,0.302714855289863,0,0.234321431833797,0,0.570471821544449,0.298897361103602,0,0,0,0,0.245668634623536,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.168336113954066,0,0,0.877955241761676,1.83892677479412,0.45071417671979,1.47461838108027,1.4351170855109,1.92201649936711,1.69545520927649,1.50045548042201,2.06105058476878,2.31876486041066,1.30281799432113,2.70042131586026,3.70260619612555,2.01947019395292,1.65689817556139,0.646584227275248,1.42003837006646,1.91428986632517,2.7129694769678,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,0,0,0,0.464367928031979,0,2.48444280083672,2.52877035117153,0.723033089650446,2.09558548191549,0.435758888184812,1.18635309555548,1.8876383142423,2.35465758150415,1.15424147083917,0,1.40241773803446,0,0,0,0,0.590789906681404,0.441463099414651,0.491953754172454,0,0.219500570817251,0,0.201057944823262,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0,0,0,0,2.57545848628462,0,0,0,0.93733833986777,2.18376766658517,1.84307626415102,0.53735113621709,0.290633938513962,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0.07333828582095,2.45616259939778,0,0,0,0,1.02882949704857,0,0.532844358032199,2.14466990487221,0,3.29296134712308,0,3.19852753868291,4.75171123760058,0.301439377059586,8.71533458600294,1.09970290300263,0,0,0,0.958499421966331,3.44585807502342,0,0.434343920002738,0.205476322550383,0.537182889719687,0,0,0.215627574859517,0,0.508189248444927,0,0,0,0,5.24304916763028,5.9832291840805,2.90090859405225,0.24538298343828,0.500170521059677,0.542530047399471,2.49565033836969,3.7470087647404,6.46579901639132,3.27995961979597,0.601892199455438,2.27407504055985,0,1.99267679560631,0.184369168541703,0.0868836144680828,0,0,0.82707210449155,0.215714200818617,0.213455115606889,0,0,0,2.48107807818777,1.38115775959256,2.80660094433074,0.512556597022804,3.07024349440022,3.21707842287215,0,0,0.532685175939381,0,0,0.232420756919918,0.120859449591622,1.20303882181971,0.460404944679482,1.14814448164607,0,0.393373244878272,0.451199612907412,0.231046011313244,2.35304930753057,0,0.105551628892876,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,0,0,0.27470839445503,0.330037999682352,0,0.650060246036521,0,0,0,0,0.137836572484531,0.107420244868274,0,0,0.0890320356467374,0.991709492165869,0.960950336825531,2.4246415373971,0,1.85938219718914,1.25924938732256,0.6970372701606,0.924100740528266,4.7907542728532,0,1.66791797193528,3.00562262158182,0,0,1.33441135746677,0.511795582622668,0,0.318203247925937,1.56989728039846,0,1.09814811894422,1.06031162111118,1.61745985258653,3.17020642346017,1.68503382495592,2.43816869544795,0.243713489631284,4.22600587027022,0.409499734223957,0.848432591722276,0,1.65409603063837,3.98063385144732,4.38450885253763,0.578775534266688,0,0.811641507850816,0.6196469961995,1.12678241012897,1.14729081763241,1.67023369722306,0.7133421029625,0,0.422215270595328,1.97576935775941,0.75894634753143,0.349934720244983,0.577332676353072,0,0,0.282431402330337,0.43050537267123,1.68471475667626,0.443430153536676,0.689170200620878,0.507447609232169,0,0,0.714695326373367,0,0,0,0,0.320472213382419,0.962479855263359,0.245040215981032,0.185803175125719,0,0.071141843348414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| |||
|short_description=p2@ENST00000555771 | |||
}} |
Latest revision as of 22:26, 24 July 2015
Short description: | p2@ENST00000555771 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000555771_5end |
Coexpression cluster: | NA |
Association with transcript: | 13bp_to_ENST00000555771_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.09e-17 | 32 |
smooth muscle cell | 2.91e-15 | 43 |
smooth muscle myoblast | 2.91e-15 | 43 |
skin fibroblast | 1.93e-10 | 23 |
muscle cell | 1.94e-10 | 55 |
muscle precursor cell | 1.46e-09 | 58 |
myoblast | 1.46e-09 | 58 |
multi-potent skeletal muscle stem cell | 1.46e-09 | 58 |
electrically responsive cell | 8.81e-09 | 61 |
electrically active cell | 8.81e-09 | 61 |
aortic smooth muscle cell | 6.63e-08 | 10 |
fibroblast | 7.76e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 4.51e-15 | 33 |
systemic arterial system | 4.51e-15 | 33 |
artery | 5.28e-13 | 42 |
arterial blood vessel | 5.28e-13 | 42 |
arterial system | 5.28e-13 | 42 |
epithelial tube open at both ends | 3.39e-10 | 59 |
blood vessel | 3.39e-10 | 59 |
blood vasculature | 3.39e-10 | 59 |
vascular cord | 3.39e-10 | 59 |
skeletal muscle tissue | 1.54e-08 | 62 |
striated muscle tissue | 1.54e-08 | 62 |
myotome | 1.54e-08 | 62 |
muscle tissue | 4.44e-08 | 64 |
musculature | 4.44e-08 | 64 |
musculature of body | 4.44e-08 | 64 |
vessel | 5.55e-08 | 68 |
larynx | 6.06e-08 | 9 |
blood vessel smooth muscle | 6.63e-08 | 10 |
arterial system smooth muscle | 6.63e-08 | 10 |
artery smooth muscle tissue | 6.63e-08 | 10 |
aorta smooth muscle tissue | 6.63e-08 | 10 |
smooth muscle tissue | 2.20e-07 | 15 |
splanchnic layer of lateral plate mesoderm | 2.32e-07 | 83 |
dense mesenchyme tissue | 3.40e-07 | 73 |
vasculature | 7.97e-07 | 78 |
vascular system | 7.97e-07 | 78 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.03e-07 | 5 |
myotonic disease | 1.03e-07 | 5 |
muscle tissue disease | 1.03e-07 | 5 |
myopathy | 1.03e-07 | 5 |
muscular disease | 1.03e-07 | 5 |
myotonic dystrophy | 1.03e-07 | 5 |