FFCP PHASE1:Hg19::chr14:89029323..89029329,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79882 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20509 | |||
|TSSclassifier=strong | |||
|UniProt=G3V473 | |||
|association_with_transcript=0bp_to_ENST00000554602_5end | |||
|cluster_id=chr14:89029323..89029329,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_ZC3H14_5end | |||
|id=chr14:89029323..89029329,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002321;4.41e-11;15!CL:0000333;9.47e-08;5!CL:0002322;9.47e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,5.42e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.23e-11;10!UBERON:0005564;1.23e-11;10!UBERON:0006215;1.11e-07;3 | |||
|ontology_enrichment_disease=DOID:14566!5.27e-12!239;DOID:162!1.64e-11!235;DOID:0050687!5.03e-10!143;DOID:305!1.54e-08!106;DOID:3095!1.50e-07!22;DOID:2994!1.50e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;7.18e-18;22!DOID:2994;7.18e-18;22!DOID:171;1.19e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.87e-17,22;DOID:2994,1.87e-17,22;DOID:171,3.28e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.59e-10!94;UBERON:0001016!1.59e-10!94;UBERON:0005743!6.71e-09!86;UBERON:0002346!2.21e-08!90;UBERON:0001017!2.88e-08!82;UBERON:0000924!8.51e-08!173;UBERON:0006601!8.51e-08!173;UBERON:0001049!1.37e-07!57;UBERON:0005068!1.37e-07!57;UBERON:0006241!1.37e-07!57;UBERON:0007135!1.37e-07!57;UBERON:0003075!4.02e-07!86;UBERON:0007284!4.02e-07!86;UBERON:0004121!8.48e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;3.75e-11;8!UBERON:0000922;1.77e-10;49!UBERON:0003135;7.12e-08;11!UBERON:0000013;9.47e-08;5!UBERON:0002410;9.47e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.88e-11,8;UBERON:0001016,1.24e-08,89;UBERON:0001049,5.73e-08,56;UBERON:0005068,5.73e-08,56;UBERON:0006241,5.73e-08,56;UBERON:0007135,5.73e-08,56;UBERON:0003135,5.91e-08,11;UBERON:0000013,7.70e-08,5;UBERON:0002410,7.70e-08,5;UBERON:0000073,1.65e-07,53;UBERON:0002616,1.65e-07,53;UBERON:0002346,2.09e-07,86 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0.602694528023977,0,0.975865597581014,0.246242116153576,0.816002764977012,0,0.85870796139317,0.273748850145768,1.00434111675842,0.61130724598361,0.903106483949403,0.865818594450472,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0,0.232401601740905,0.568676929949686,0,0.553995408531877,0,0,0,0.32389366601898,0.257575567634187,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0.426224750532694,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0.628975936525128,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0.954053754535364,0,0,0.382273228125229,0,0,1.05353633910031,0.393419540227666,0,0,0.167186495390678,0.651844533267181,0,0,0,0.589211814949674,0.886135578334485,0,0,0,0.164437904603676,0,0,0.14828656316206,0.267540828089713,0,0.226618685395132,0,0,0,0,0,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0.821127996921047,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.511450247374121,0,0,0.289693037921647,0,0,0.472674085820339,0.221729397462564,0.527008714158756,4.78073625566651,0,0,0,0.174129737299267,0,0,1.14398982156026,0,0.39752481473341,0,0,0,0,0.550236083880135,0.417989933073621,0.516833518338658,0,1.00416183829401,0.402829317109147,0,0,0.735326160691737,0,0.446498641420399,0.898117490504679,0.900891843866578,0,0,0.549605231791222,0,0,0,0,0.12663051166458,0.397227542439656,0.286836620748814,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.326923806226917,0.151357427644931,0.576175924479999,0,0.312160076830321,0.570471821544449,0.149448680551801,0.587172493218824,0.485618833104395,0.421352420106746,0.408308342509787,0.368502951935304,0.206651562351531,0,0,0,0,0.505008341862199,0.500474079487857,0.554128230968366,0,0.612975591598039,0.150238058906597,0,0.358779271377724,0,0.211931901159562,0.300091096084402,0.103052529238439,0.515281080091258,0,0.675105328965065,0.194874010322397,0.504867548488229,0.276149695926898,0,0.355009592516614,0.503760491138201,0.508681776931463,0.193260853163297,0.272746120590835,0.286804595389004,1.09776335516636,1.19276791489337,0.813357600086629,1.96956004529204,1.51392510525377,1.09493207722749,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0,0.435758888184812,0.474541238222193,0.674156540800822,0,0.38474715694639,0.738155454624648,0,0,0,0,0,0,1.32438929824395,0.122988438543114,0.514703430895577,0.109750285408626,0,0.502644862058154,0.0925884451585296,0,0,1.44331342025273,0.463721619900307,0.234817388471643,0.288732895522148,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0.16798212819886,0.141775097242386,0.358234090811393,0.290633938513962,0.383382679165211,0,0.176096868026452,0.207328115540772,0.432359860250884,0.6312121671319,0.63497894292169,0,0,1.71072446022705,0.205654985406647,0.300343057843917,0.571652865261156,0,0.43596006883328,0.36669142910475,0,0,0,0.531876233169741,1.04007436911366,0.257207374262142,0,0.532844358032199,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.099972991182057,0,0,2.10833939483032,0.239624855491583,1.14861935834114,0,0.144781306667579,0,0.179060963239896,1.00876629594175,0,0.431255149719035,0.256686072559497,0,0,0.773288812777695,1.17261385734044,2.55175500661265,0,0,0,0.24538298343828,0,0,0,0.178428988797162,0,0.117141414992713,0,2.27407504055985,0,0.664225598535437,0.921845842708516,0.0868836144680828,0,0,0,0.431428401637234,0.320182673410333,0.606255142892519,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.128139149255701,0,0.482561763430822,0,0.154209693802656,0.355123450626254,0,0,0,0.846016147141356,0.40101294060657,0.276242966807689,0.229628896329213,0,0.131124414959424,0,0.462092022626489,0,0,0.422206515571503,0,0,1.0795795805107,0,0.541892875087706,0,0,0,0,0.657779629937804,0,0.512900250232778,0.328014645699706,0.650756789328606,0.103041011647722,0.54941678891006,0.41254749960294,0.574265537996172,0,0,0.193341436584244,0.616194468458578,0.307007349452259,0.551346289938122,0.214840489736547,0,0.511359764496605,0,0,0,1.02090169995667,0.2023155617111,0,0,0,0.308033580176089,0,1.73986598415015,0.18532421910392,0.286249773483982,0,0.632758849437452,0,0.255897791311334,0.42793898803392,0.318203247925937,0,0.179872457583315,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0.48763373908959,0,0,0.9554993798559,0.141405431953713,0,0,0,0.438450885253763,0,0,0.202910376962704,0.30982349809975,0.845086807596724,0.573645408816206,0.294747123039363,0,0,0.211107635297664,0,0.379473173765715,0,0.288666338176536,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0.476463550915578,0.822724546172388,0.648473311192717,0.540031437238115,0,0.213648142254946,2.88743956579008,0.735120647943095,0.743212700502875,0.144269212976445,0.640276590135727,0.318852545457645,0.997896857164083,0.383010740264733,0,0.324621940274555,0.280797178113459,0,1.09675927041116,0,0,0.1605880751037,0.201799707191048,0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| |||
|short_description=p4@ZC3H14 | |||
}} |
Latest revision as of 10:43, 16 September 2015
Short description: | p4@ZC3H14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ZC3H14_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000554602_5end |
EntrezGene: | ZC3H14 |
HGNC: | 20509 |
UniProt: | G3V473 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 5.42e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 2.88e-11 | 8 |
nervous system | 1.24e-08 | 89 |
neural tube | 5.73e-08 | 56 |
neural rod | 5.73e-08 | 56 |
future spinal cord | 5.73e-08 | 56 |
neural keel | 5.73e-08 | 56 |
male reproductive organ | 5.91e-08 | 11 |
sympathetic nervous system | 7.70e-08 | 5 |
autonomic nervous system | 7.70e-08 | 5 |
regional part of nervous system | 1.65e-07 | 53 |
regional part of brain | 1.65e-07 | 53 |
neurectoderm | 2.09e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.87e-17 | 22 |
germ cell cancer | 1.87e-17 | 22 |
neuroectodermal tumor | 3.28e-10 | 10 |