FFCP PHASE1:Hg19::chr17:41323204..41323250,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4077 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6746 | |||
|TSSclassifier=strong | |||
|UniProt=Q14596,F8W799,B7Z4J4,B7Z5R6 | |||
|association_with_transcript=0bp_to_ENST00000341165,ENST00000389311,ENST00000389312,ENST00000537493,ENST00000542611,NM_005899,uc010whu.1,uc010whv.1,uc010whw.1_5end | |||
|cluster_id=chr17:41323204..41323250,+ | |||
|description=CAGE_peak_1_at_NBR1_5end | |||
|id=chr17:41323204..41323250,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.85e-34!115;UBERON:0001049!4.23e-10!57;UBERON:0005068!4.23e-10!57;UBERON:0006241!4.23e-10!57;UBERON:0007135!4.23e-10!57;UBERON:0000955!1.32e-08!69;UBERON:0006238!1.32e-08!69;UBERON:0002616!1.53e-08!59;UBERON:0003080!2.53e-08!42;UBERON:0000153!2.74e-08!129;UBERON:0007811!2.74e-08!129;UBERON:0002780!6.81e-08!41;UBERON:0001890!6.81e-08!41;UBERON:0006240!6.81e-08!41;UBERON:0000033!1.00e-07!123;UBERON:0000468!3.30e-07!659;UBERON:0000062!4.59e-07!511;UBERON:0000475!5.35e-07!365;UBERON:0001017!6.83e-07!82;UBERON:0005743!9.76e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.70e-09;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.11e-34,114;UBERON:0001049,1.13e-09,56;UBERON:0005068,1.13e-09,56;UBERON:0006241,1.13e-09,56;UBERON:0007135,1.13e-09,56;UBERON:0000073,1.94e-08,53;UBERON:0002616,1.94e-08,53;UBERON:0000955,3.13e-08,68;UBERON:0006238,3.13e-08,68;UBERON:0002780,6.81e-08,41;UBERON:0001890,6.81e-08,41;UBERON:0003080,6.81e-08,41;UBERON:0006240,6.81e-08,41;UBERON:0010314,3.14e-07,132;UBERON:0011216,8.56e-07,223 | |||
|phase1_expression=67.7660354679176,44.5329089693245,66.2485699251064,43.0315182918461,47.8248371037198,64.5530507834273,22.796989035148,37.271472532183,29.7751616147816,16.9556416186041,11.1648186875588,22.7179027015379,29.0143676051299,72.1557837757072,91.1342783251768,75.9727415490506,68.7071761947334,75.2219393098994,66.8467934342995,22.1617904538218,27.7440940092184,22.2552852249442,43.2216340567896,34.7661039685126,24.6063573605813,19.2561782484837,15.2707096376899,17.0015287637547,47.2037132218685,51.0493099469293,33.2854665129563,25.74379428541,33.4338569843858,41.4124491386802,12.9370224969104,6.82412315939623,19.6712294354348,34.3477153289764,23.2631559065364,34.0707067023887,79.2660778809332,62.1875838756441,80.8787282371346,65.4292074508041,41.1884778620802,49.9723166046901,57.4099721157041,30.0152558255933,23.5376841880279,21.8646218164834,14.6011602721587,13.7159693335379,29.3033828626126,16.7826017731795,18.9597081232078,51.3901586951311,40.1172040585033,41.1243976534505,43.7699966090391,26.3161802202397,30.0488449125549,45.8493307259535,21.7415386807579,27.2783840340924,89.964863974861,62.9797599407165,62.9050471485531,16.8336605722018,11.9941071236646,15.6375968187684,102.312515945039,75.8651930134383,77.8497473104576,48.7999711380586,50.3872190917153,48.2214884669265,60.7697894502539,66.5283635287873,76.183928094416,37.0516566863623,43.5627523066007,47.1273516712756,26.3994366691984,34.9528711207764,26.6852776159066,29.444385357089,52.4518743017176,38.5084134769504,39.6626923670917,42.9324189540914,28.4606484554724,24.6639619535794,20.2604810906371,17.1822727152734,25.7833938971507,15.8030450865046,41.8991810342464,36.1569901729232,45.8491342768906,63.363681753067,38.1329051961301,36.9289288473092,62.3445530905316,80.215528957325,50.9668219931468,56.0480753296562,84.4908054946849,64.5580251417403,66.0701485604181,66.5973513644888,59.1389038061715,68.1037251477373,48.7862792803179,48.1573490561484,50.1770514263889,56.9945993768758,44.4535772578229,53.6058814952903,76.6649666819094,67.5358678367085,49.4823424930878,43.7207940446252,54.9599184633871,58.6178679087236,74.9584359314075,65.1137443121046,55.0155757937101,39.918135158497,37.976507801258,40.5508330871837,99.9608151887243,61.7044790927345,43.9847212741744,49.155724724301,66.1766042039374,66.0500126461356,67.5993054993434,56.4496449551058,41.6898543693539,44.3458794925128,38.0324622051236,64.4417051448746,18.9433549912122,16.3145154825149,55.4976043149508,54.5026077746706,56.7730491415554,49.3675592312058,38.3236590222686,32.6882601170017,42.5351551764749,29.2479762336082,40.2682981864809,54.8348703666289,37.3354498226816,35.2151093683286,33.4391946458897,50.1328512788498,50.1630430388261,53.5552980423472,44.3112248820062,36.4930610744886,37.8296189199663,28.6777202669778,46.1780910292603,61.9740114291514,55.2342256660378,36.1482852351464,24.5306619945413,34.1735637444526,36.0907435542902,118.602375692457,131.845289810431,17.0076680335588,72.5579049475165,56.8570997373963,68.7203648420606,37.2887606973458,46.8162264501831,30.8372680078269,32.0246987189115,30.3401084553107,62.8646291507528,60.0809597430809,41.3558614877051,56.9103927944942,73.7505183334399,33.7422861840667,48.69697198553,31.9464220064892,44.8346041655403,32.5293561243229,32.8602077067307,33.1463903817306,88.6029103246237,43.8518512803012,66.6451288583687,73.6561771514873,69.4820071272745,17.2930658768225,15.8095991199572,48.1441285908629,46.4189708724987,76.1926317581503,59.2619788189131,91.0268753523088,71.6635540984467,33.0087652995661,52.3817736211477,68.7654791995787,61.0363875339538,46.214028796998,78.8351848674058,85.0213782150576,76.680144808615,48.9451363499672,61.5801872618775,72.4484932080609,85.2382061427692,96.8259880344683,44.3761990645768,62.3655488029093,60.1940102702231,54.692821445213,56.7311930828936,60.5157696270798,22.4431619278456,23.7228285295459,27.1893826314673,29.4397396243652,21.1949514735528,18.6138453128673,67.2732989018209,74.6159488303747,33.1523811245953,78.0138119093725,64.9691533502627,43.3002888145829,45.3492816310094,32.7775000641535,41.5808277201125,42.922250486204,36.5396753431089,39.370741982768,50.4289165372139,34.6272441251751,34.6933063673585,9.81692416624121,25.1060146912154,16.1709582524096,65.912618107352,42.2615703171379,49.0355622545565,20.7487656724886,52.7620401349957,44.6076306776166,51.3631335712368,40.464631172743,28.8518150821381,59.441781791776,26.7162810354466,23.9185000614303,28.8662684050547,39.9959897164015,59.9958427545049,49.9507909253315,47.6875077953909,63.5448868463558,31.608175918371,28.3300433491308,60.0769494853249,42.354771990202,51.5750133141887,34.6815185751075,78.6156359970663,63.5152435645891,55.4367255530631,42.4325550230384,36.4213545206951,14.7798971368783,36.3640032474624,30.891889215575,33.0034693324842,29.7932142886257,40.3846607698195,43.5466805136437,42.1982809956169,32.503764744314,39.3829297053729,42.3483711559924,53.4495429019181,25.1173628933608,38.8004461261619,30.2887120440524,43.3060247788556,21.4593867511129,22.823174319012,60.1020143481807,70.7250570997289,15.6896498299907,25.5328437641901,22.1130408583362,65.0549871144571,30.3868099019208,29.6366521241077,26.0588947434988,58.2842795937775,22.9666043150694,85.6087830849225,75.8234108982256,73.580121509994,41.3520854180048,50.2257091432126,50.6001454759276,48.4042208092997,31.0127226752108,31.380119108958,49.6599881869797,66.1633758612235,42.0793263613755,39.3418855417281,61.0795356625974,47.6536940439533,49.1553828951436,52.5975872140499,20.8223766172195,11.5993321916654,26.9701187188302,15.3105300396759,130.32722216681,128.639427457731,179.441917317803,81.2217675180706,56.0190983586838,56.1518599058453,86.9318201198774,88.3223494545951,96.8292828308359,85.2789501146952,50.5589447542568,45.481500811197,34.1461135265266,36.532407919449,37.9800487195908,75.4149773582959,19.3843145888113,20.9317488524622,40.319765093963,43.7899827661792,30.2038988583747,29.1002468588409,31.6227335069944,25.4007846396931,72.4474798830828,81.7952317625373,54.1673982255832,71.8860627324482,77.2677946090722,56.6205802425498,46.0096005979472,27.1409061092674,31.6059871057366,44.5129185594846,56.5987327810147,35.6765861872075,23.3258737711831,51.5301628679442,33.3333179947945,44.4331914397028,46.7974301777263,50.7451485892971,9.92639148396306,34.1177943372557,13.3339460760065,11.6911379722609,47.7093362595798,17.0600076106345,24.4934935598183,39.5126126466915,15.4227252690289,13.8182683147365,11.5388647986616,18.0962153861977,15.7904441696458,14.9996085663859,100.421023503838,87.0580051912919,35.1336671409453,29.1933034672738,72.2340036154753,73.8804053514169,21.610393697129,21.8650174789558,43.0699153497129,31.8529520557895,80.3419649220798,41.181725992444,33.2745012967632,31.6217569935827,30.0483728016277,57.3624107596581,50.9008595638942,26.9316142634879,53.5972854593359,47.6020556239617,42.2818148203234,40.8360679982669,32.7751209971982,44.6251727325394,54.7773483485314,57.1570561531692,48.9773392479981,60.6828874561405,50.4561135403542,57.821156360423,63.9768243736701,45.7754794312391,37.6491515415284,43.0824238267844,9.21232048720802,51.7806175521044,44.8666579575571,36.1076374491646,50.3642881233281,39.5333322819919,32.8696602544465,42.0539561672497,50.7233027753626,58.1336669609794,10.2403085208814,72.1391929308602,36.9775513648644,56.5109633229061,45.1083327932344,55.373977143919,41.9037661095054,47.1041672421266,61.3831239355268,26.0448990420009,59.030527684197,40.7849857695035,35.939525779571,34.0851679064012,44.457519183256,47.061290645285,49.5772761558938,32.638017894495,57.84349207156,74.7499407018977,23.1478635997086,24.4954304171488,49.4581659409132,30.1636023991104,30.4894757611703,79.3632240548248,23.2472901242464,15.1624328100863,19.9543569091504,65.9306158593974,96.9224933633443,89.4625532356579,104.245435252872,85.763439164804,88.4428887135318,104.404203102027,94.5055015166701,111.830649857492,25.3173048572111,18.2871172500038,39.4514747729461,12.6346159085489,5.33796088012846,32.5829642535737,18.6528739092722,16.1659290860581,18.3845155327072,7.83192256078367,17.2049628345514,8.98550969963068,23.0517025823524,8.61739426751628,15.038068625404,13.0354668907235,16.05880751037,14.1259795033733,14.9046183191614,20.6103206853459,14.4403159224975,16.1046797682539,18.5202547300218,14.0679428689469,19.488432172667,20.9248578211111,22.9887326704586,21.6496779198583,9.86909035614947,43.9780269959316,74.5726632493941,24.8789069586503,32.9872417461336,52.5651871591864,55.1499759744064,61.4716889323562,76.790175524808,40.7600535584182,72.0227412021825,79.9196502064464,13.8435254350478,25.3350489753592,90.4585866659857,53.0465117819804,57.6925992586292,45.3050263484546,32.9867278635666,62.8299967076851,47.4504894057886,67.4909828527046,21.9976119197555,73.7852674164264,64.6604349336737,77.7958931012458,61.0679630039988,72.9157251552151,59.8841394003583,21.6155041700744,23.8765799989614,84.0999507504361,34.3656213822209,46.5284180035762,48.9322501259628,24.476779500144,19.8291137100613,32.6414990474589,50.4872589913888,72.3578631752448,51.8777903478083,75.0833174933015,70.0447856919908,85.1215340957414,49.8938162916975,61.0675999940282,65.9463715377541,59.9335213755226,29.9733075704478,36.4416036303675,49.6518489683577,58.6962133906732,81.6134557210593,82.6203902828884,22.482525603062,20.2504530749582,17.4522265995164,20.3036094555463,29.8015052162964,23.9984869375455,25.0474927195924,27.0192184266644,54.437500648231,42.7669957376967,29.2600857868257,47.60550074326,86.5877880038299,83.3270257621455,134.426631885398,59.8972679934856,24.7127877893006,24.9568459318038,91.7329419867014,80.2577647298789,75.1988870778339,14.4139283480376,36.3936191213687,40.0587626231253,77.3385429584805,76.2241511106583,28.1586940700051,58.5107727359798,44.4957321466898,42.4084702814741,48.5197327076245,77.7831096307422,52.4267973740066,41.8153504205356,46.1067464568264,27.5962599296146,27.7695581336209,50.858054258062,37.6966364493143,69.366487292086,52.7997119687863,35.4128172518052,34.644336298852,33.5031064777094,62.7518936680074,36.0967558168236,77.9633555692837,38.508780825737,66.3706803087986,60.1452561580848,40.4791362261042,69.2572206973251,62.1148214691516,59.1436444363105,47.2616568265468,34.3609788497747,65.0345041896846,61.3673439429518,93.1894016740744,42.66062026564,58.438808611654,61.4018707853396,61.9129181052473,41.0309837660157,93.0651447500174,74.2027153594602,1.27746588066972,49.4230257632951,24.7114113022556,66.4692115027965,66.6856833873999,43.0723814746088,67.691181169158,95.2881826863187,83.2429536258185,62.4134459401687,57.6479813667846,19.8043114196672,27.4953306252211,27.1972332657849,26.624399822403,67.6196798006324,17.1040130772885,64.4136048745536,75.8652972041476,24.1129722697529,21.7312309823629,22.0183379155468,26.9968669861801,31.7258801368759,62.0252973478432,69.7704150206473,55.1639951094387,74.2232422110223,108.240344932392,46.7939955658725,46.6353929486252,72.1842279637101,111.893542991758,13.9847695710112,56.4719585823861,63.9523903488938,59.4388995399125,71.8381149374925,31.9339905714929,56.56882323276,58.8089754989452,80.6037285229453,78.1790644582106,74.3376999078916,71.0089071358245,41.2319279301234,30.3070459596169,64.2860223657522,91.1784969578062,55.9222724718714,69.4632430536731,24.1086190915492,20.3393639296096,55.5356894260058,49.5056201066221,63.6752330817658,50.5470201659712,69.5089977104785,36.4365503300544,51.3919544380852,72.6056276166681,74.6137947010739,79.7038782009199,76.8738327150386,67.0020187737527,66.1306474995183,45.4928684982068,44.4331914397028,69.653541384972,70.1092142700552,34.1884481239024,53.6207805860053,37.6122103274923,37.6278428854031,44.3844689202091,65.1546338146307,48.8041729399996,59.6173518469679,57.4388571676278,39.1688092546789,42.2789185585163,48.6443443465896,57.6654297132603,63.8720419272318,44.0946797528577,41.0559145762447,43.0663577583952,50.6092709957382,45.5280555261572,58.6440026739945,47.6038757849454,47.8261973702731,48.7643928972898,52.8998486261483,59.3162874160938,35.6024710550207,48.075398725591,57.5841625789722,80.7583348663366,35.6346686253511,82.9888958620962,46.1959896778424,29.0183584655709,101.406843753839,68.2815405573045,77.903645870447,35.8209678706728,50.2160473535239,47.3526911134961,36.267839194932,77.3756378191073,35.8738126023125,52.5054119431422,48.9214529445585,72.8621958519621,41.115525165111,41.0552356568292,29.6053363603078,51.1071364200404,35.1455259517819,43.1076731651599,23.7985001067367,25.0725564781231,39.9538752813092,63.5617867994856,32.5867531945758,39.8656597000417,17.4181632809232,54.4830021753556,34.5039396469382,23.4326253365286,42.5917588948854,28.5150650322762,54.4191795460308,59.9849099013571,18.435282293117,59.1488092215359,16.4032429602607,66.447372107694,59.2495585400349,68.2927414497637,63.7153912956879,52.4277332404664,70.2388979851466,76.7135202260424,50.4143392443436,58.7836645945852,62.1681235682627,107.077065194366,33.4683720088497,23.9478538395913,65.3005810737177,41.1271371495204,60.2583710838124,39.3505157854257,24.2677790981855,73.6309114539228,42.1563593590357,67.991718977279,36.1431238384363,74.3524505495839,97.2893047308158,59.9733751411344,74.2024193683155,69.653450420899,64.0499682958459,59.6202541829859,54.277518918861,66.4922979041654,113.612823856315,37.562153726041,108.747472683292,124.761260943184,58.8756636109533,69.6646305534971,72.9133482736891,34.3397282916222,54.1902109822242,60.5610320823571,59.6559056215041,55.5511052154651,24.2484456124711,74.2544658365863,61.9035424269047,29.9891214745754,57.5289993920982,53.3341150309995,82.6510420044597,62.9708354196342,23.2280009247108,21.1559394169988,31.4683472867669,72.1540228257228,60.9215522639328,65.8973321582647,68.4347065195951,59.8016028760186,47.5694642936873,56.4112739505624,81.7137006868493,44.6758393660898,35.9839407370611,29.6217071083004,60.6256440344034,43.6768539587831,112.895998533581,116.537190693821,133.050997685696,73.0683091743065,79.1708918686397,24.329704200059,50.9313984413103,45.0707144046985,67.4288109772591,51.0123997698791,33.6647141153682,84.1970064957676,80.8670373864642,50.323950710683,70.112420021617,70.4672875833862,96.3874573534381,83.4700384919112,77.3459981477622,58.9647087966725,63.6271124723609,73.0952449620365,28.8829940623045,45.1741464672314,42.7002794775987,67.4027480189013,66.4606113304331,52.2951383081177,75.5399603208148,39.1273474239098,56.4329368584592,39.271562130634,67.7154355859713,52.8232925796787,70.2506955519756,55.8088265139688,19.6819622742723,38.024419043366,19.5115691557613,31.0046042415624,51.3057418109876,59.6397897981143,52.147168172814,77.5973869754771,56.8083955931098,75.4544189907489,92.4690983005343,71.2201499549276,80.2277134032805,68.8517778851825,59.1572027239526,40.2553386664402,81.7865983874419,69.7304301905857,64.8795908732945,76.3180261420177,44.5197070426424,60.8204301729895,86.4916927019635,36.3058578004946,48.5609423743605,54.0602390403432,68.4468040052192,65.6994638729672,71.0222790702454,66.7309732437811,70.5702180636643,61.589780838854,14.1050136613422 | |||
|short_description=p1@NBR1 | |||
}} |
Latest revision as of 17:43, 24 September 2015
Short description: | p1@NBR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NBR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341165, ENST00000389311, ENST00000389312, ENST00000537493, ENST00000542611, NM_005899, uc010whu.1, uc010whv.1, uc010whw.1_5end |
EntrezGene: | NBR1 |
HGNC: | 6746 |
UniProt: | Q14596F8W799B7Z4J4B7Z5R6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 5.11e-34 | 114 |
neural tube | 1.13e-09 | 56 |
neural rod | 1.13e-09 | 56 |
future spinal cord | 1.13e-09 | 56 |
neural keel | 1.13e-09 | 56 |
regional part of nervous system | 1.94e-08 | 53 |
regional part of brain | 1.94e-08 | 53 |
brain | 3.13e-08 | 68 |
future brain | 3.13e-08 | 68 |
regional part of forebrain | 6.81e-08 | 41 |
forebrain | 6.81e-08 | 41 |
anterior neural tube | 6.81e-08 | 41 |
future forebrain | 6.81e-08 | 41 |
structure with developmental contribution from neural crest | 3.14e-07 | 132 |
organ system subdivision | 8.56e-07 | 223 |