FFCP PHASE1:Hg19::chr17:46659728..46659749,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3213 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5114 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=66bp_to_uc010wll.1_5end | |||
|cluster_id=chr17:46659728..46659749,- | |||
|description=CAGE_peak_3_at_HOXB3_5end | |||
|id=chr17:46659728..46659749,- | |||
|ontology_enrichment_celltype=CL:0000222!6.26e-17!119;CL:0000213!9.09e-14!57;CL:0000215!9.09e-14!57;CL:0002139!7.12e-12!24;CL:0000115!1.45e-10!35;CL:0000071!2.12e-08!18;CL:0002546!2.12e-08!18;CL:0002078!4.28e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.99e-14;24!CL:0000115;3.00e-14;36!CL:0002539;2.43e-11;10!CL:0000071;5.31e-09;18!CL:0000213;3.43e-08;58!CL:0000215;3.43e-08;58!CL:0002138;1.48e-07;6!CL:0002078;4.39e-07;45!CL:0000359;6.68e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.64e-15,36;CL:0000222,1.17e-14,121;CL:0002139,2.33e-14,24;CL:0000213,5.02e-14,58;CL:0000215,5.02e-14,58;CL:0002539,1.02e-11,10;CL:0002078,3.16e-11,45;CL:0000071,5.34e-09,18;CL:0002546,5.34e-09,18;CL:0005020,1.82e-07,6;CL:0002138,1.82e-07,6;CL:0005022,1.82e-07,6;CL:0000359,6.06e-07,32 | |||
|ontology_enrichment_development_v019=CL:0002546;5.31e-09;18!CL:0005022;1.48e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!3.46e-18!69;UBERON:0003914!1.12e-16!118;UBERON:0002049!3.87e-15!79;UBERON:0007798!3.87e-15!79;UBERON:0001981!2.82e-14!60;UBERON:0007500!2.82e-14!60;UBERON:0004537!2.82e-14!60;UBERON:0006965!2.82e-14!60;UBERON:0002100!5.77e-14!216;UBERON:0009569!3.85e-13!113;UBERON:0004872!2.11e-11!84;UBERON:0000947!1.03e-10!21;UBERON:0010191!1.03e-10!21;UBERON:0000490!6.89e-10!138;UBERON:0005256!7.46e-10!143;UBERON:0004535!1.26e-09!110;UBERON:0002417!1.48e-09!61;UBERON:0000916!1.48e-09!61;UBERON:0001009!1.98e-09!113;UBERON:0004573!3.72e-09!33;UBERON:0004571!3.72e-09!33;UBERON:0001637!5.53e-09!42;UBERON:0003509!5.53e-09!42;UBERON:0004572!5.53e-09!42;UBERON:0004111!6.83e-09!241;UBERON:0000025!9.25e-09!194;UBERON:0001986!2.12e-08!18;UBERON:0004638!2.12e-08!18;UBERON:0004852!2.12e-08!18;UBERON:0001135!5.76e-08!15;UBERON:0002385!6.77e-08!63;UBERON:0001015!6.77e-08!63;UBERON:0000383!6.77e-08!63;UBERON:0000466!1.43e-07!126;UBERON:0005177!1.76e-07!107;UBERON:0001134!3.47e-07!61;UBERON:0002036!3.47e-07!61;UBERON:0003082!3.47e-07!61;UBERON:0004290!4.18e-07!70;UBERON:0003104!5.39e-07!238;UBERON:0009142!5.39e-07!238;UBERON:0000926!7.66e-07!448;UBERON:0004120!7.66e-07!448;UBERON:0006603!7.66e-07!448;UBERON:0000487!8.09e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;1.24e-16;21!UBERON:0010191;1.24e-16;21!UBERON:0004573;7.17e-13;33!UBERON:0004571;7.17e-13;33!UBERON:0000055;1.51e-12;65!UBERON:0004237;2.43e-11;10!UBERON:0004695;2.43e-11;10!UBERON:0002111;2.43e-11;10!UBERON:0004178;2.43e-11;10!UBERON:0003688;3.48e-11;6!UBERON:0002358;3.48e-11;6!UBERON:0003684;3.48e-11;6!UBERON:0001178;3.48e-11;6!UBERON:0001473;2.10e-10;8!UBERON:0004536;2.10e-10;8!UBERON:0006558;2.10e-10;8!UBERON:0007500;1.77e-09;56!UBERON:0001981;1.77e-09;56!UBERON:0004537;1.77e-09;56!UBERON:0004638;5.31e-09;18!UBERON:0001986;5.31e-09;18!UBERON:0004852;5.31e-09;18!UBERON:0001637;6.02e-09;42!UBERON:0003509;6.02e-09;42!UBERON:0004572;6.02e-09;42!UBERON:0001135;1.27e-08;15!UBERON:0002465;4.66e-08;10!UBERON:0002049;9.86e-08;75!UBERON:0007798;9.86e-08;75!UBERON:0003914;3.06e-07;74!UBERON:0004457;4.06e-07;9!UBERON:0000042;4.06e-07;9!UBERON:0000487;6.45e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.87e-22,68;UBERON:0002049,2.25e-19,78;UBERON:0007798,2.25e-19,78;UBERON:0000947,7.31e-17,21;UBERON:0010191,7.31e-17,21;UBERON:0007500,7.83e-16,59;UBERON:0001981,7.83e-16,59;UBERON:0004537,7.83e-16,59;UBERON:0006965,7.83e-16,59;UBERON:0004573,1.52e-13,33;UBERON:0004571,1.52e-13,33;UBERON:0003914,2.11e-13,117;UBERON:0001637,3.23e-12,42;UBERON:0003509,3.23e-12,42;UBERON:0004572,3.23e-12,42;UBERON:0004535,8.74e-12,109;UBERON:0004237,1.02e-11,10;UBERON:0004695,1.02e-11,10;UBERON:0002111,1.02e-11,10;UBERON:0004178,1.02e-11,10;UBERON:0003688,3.03e-11,6;UBERON:0002358,3.03e-11,6;UBERON:0003684,3.03e-11,6;UBERON:0001178,3.03e-11,6;UBERON:0001009,3.36e-11,112;UBERON:0001473,2.16e-10,8;UBERON:0004536,2.16e-10,8;UBERON:0006558,2.16e-10,8;UBERON:0004872,7.39e-10,83;UBERON:0004638,5.34e-09,18;UBERON:0001986,5.34e-09,18;UBERON:0004852,5.34e-09,18;UBERON:0001135,9.72e-09,15;UBERON:0009569,2.22e-08,112;UBERON:0002465,4.76e-08,10;UBERON:0000487,6.46e-07,22 | |||
|phase1_expression=1.63510541343501,0.856402095563933,1.40954404095971,4.00293193412522,3.5756887554183,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0,0.662794751455832,3.36162573225888,4.82155622419182,3.65155045193687,5.36726078669558,0.246242116153576,2.44800829493104,0.313454721478088,0,0,0,0,0.410502947249729,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,1.0429658368404,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0,0,0,0,0.334372990781356,0.651844533267181,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37528029272598,0,0,0,0,0,0,0,0,0.198762407366705,2.58070378531837,1.38856200643038,0,0.419499436209906,1.37559020970034,0.626984899610432,4.65150166504792,2.13459757612026,4.01664735317604,1.20848795132744,0.760272105718513,1.95249646038536,1.10298924103761,3.24056779152704,2.14319347881791,2.2452937262617,1.35133776579987,0,1.89853131913626,0.916008719652036,0,0,0,0,0.886413581652058,6.48804985984772,1.43418310374407,0.354668382198357,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0.298897361103602,0,0.161872944368132,0.140450806702248,0,0,0,0,0,3.64064544775211,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0.211931901159562,0.600182192168805,0.309157587715317,0.515281080091258,0,2.70042131586026,0.779496041289589,0.757301322732344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,2.78620756819187,1.44375896333917,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,1.2347220339942,2.94017422771084,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,1.38895653772983,1.33177906564219,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,2.28925928434388,0.829312462163088,0.720599767084807,1.76739406796932,0.126995788584338,0.381988425558278,0,1.71072446022705,0.925447434329912,0,0.285826432630578,0,0,0,1.42198887333556,3.57656445851882,0,0.531876233169741,0,0,0,0,0.857867961948885,0,0,0,0.355391948742546,0,0.904318131178758,0.871533458600294,1.09970290300263,0,0,0,0,0,1.42636905040718,0.434343920002738,0.205476322550383,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0.49076596687656,0.500170521059677,0.542530047399471,0,0,0,0,0,0,0,0,0.368738337083406,0,0,0,0,0.215714200818617,0,0,0,0,0.496215615637554,2.76231551918512,0.841980283299221,3.97231362692673,2.55853624533352,2.2519548960105,0,0.616838775210622,1.42049380250502,0.246381468041427,2.07701771673448,1.39452454151951,0,0,0,0,0,0.262248829918848,0.451199612907412,0.15403067420883,0.784349769176855,1.46139224653261,0.422206515571503,1.13733384070897,3.06168669497728,2.15915916102139,6.16909010761157,0.541892875087706,0.501689773854853,0,0,0,0.219259876645935,0,0,0,0,1.03041011647722,0,0,0,0,0,0.096670718292122,0.308097234229289,0.307007349452259,0.137836572484531,0,0,0.0852266274161009,0.267096106940212,0,0,0,0,1.85938219718914,5.03699754929024,0,1.84820148105653,0,3.47973196830029,0.18532421910392,0,0,0.632758849437452,1.90630193923825,0.511795582622668,0.855877976067841,0,0.78494864019923,0.359744915166629,0.823611089208164,0.706874414074119,0.404364963146632,0,0,1.46290121726877,3.41198885483798,1.05650146756755,0.409499734223957,0,4.52032466480971,1.65409603063837,0,0,0.578775534266688,2.62357900818653,0,0,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,2.05111450980652,0,0,0.852408440419239,0.23874448473769,0,0,0,0,0,0,0,4.38345574152353,1.38141957765574,0.251932747854276,0,0.246169610922139,0,0,0,0,0.493217028184668,0,0,0,0,0,0,0,4.34999745260876,0,0,0.236387681767936,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0.769502585037971,0.113942055847001,0,0,0,0,0.274792780205587,0,0,0,0,0.451191321234361,0.392125068635479,0.167821586975843,0.189753732724185,0,0.421996129056054,0,0,0,0,2.4768118060935,1.83309043480088,0,0,0,0,2.40773294189637,0,0,0,0.971121518136371,0.789168805698781,3.62972148145992,0,0.063186579628488,0,0,0,0,0,0,0.284609546029793,1.24807205711825,0,0,0,1.22308667769421,0,0,0,0,1.45483524732629,0,0,0,0.397429223405979,0,0,0,2.13452994739353,0.19980960958213,0,1.25990255782507,0,0,0.372757606696298,0,0,0.104602846312333,0,0,0,0,0,0,0,0.279282401272254,1.3749625440701,0,0,0.858452096273142,0,0.53746777989381,2.16179930125442,1.16495949527454,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0.86686278029118,2.7276385830199,0,0,0,0.714695326373367,0,0,0,0,0,0,1.23138781124008,1.02232813071253,1.47305718976163,0.439656701034247,1.32506888912221,0.387848869084652,0,0,0.704815022316672,0.961086713109252,1.57204305099666,0.414239055347196,0,0,0,0,0.544017803369474,0,1.22538230705385,0.655745261419609,0.314108192500469,0,0,0,0.573409195690071,0.332787154610557,1.24192805882767,0,0,4.09452617362449,0,0.705797459094515,0,0,1.79105763464249,2.80455971816669,0,0,0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| |||
|short_description=p3@HOXB3 | |||
}} |
Latest revision as of 07:04, 25 September 2015
Short description: | p3@HOXB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXB3_5end |
Coexpression cluster: | NA |
Association with transcript: | 66bp_to_uc010wll.1_5end |
EntrezGene: | HOXB3 |
HGNC: | 5114 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.64e-15 | 36 |
mesodermal cell | 1.17e-14 | 121 |
endothelial cell of vascular tree | 2.33e-14 | 24 |
lining cell | 5.02e-14 | 58 |
barrier cell | 5.02e-14 | 58 |
aortic smooth muscle cell | 1.02e-11 | 10 |
meso-epithelial cell | 3.16e-11 | 45 |
blood vessel endothelial cell | 5.34e-09 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.34e-09 | 18 |
lymphangioblast | 1.82e-07 | 6 |
endothelial cell of lymphatic vessel | 1.82e-07 | 6 |
vascular lymphangioblast | 1.82e-07 | 6 |
vascular associated smooth muscle cell | 6.06e-07 | 32 |