FFCP PHASE1:Hg19::chr17:75314660..75314675,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:75314660..75314675,+ | |||
|coexpression_cluster_id=C177 | |||
|description=CAGE_peak_at_chr17:75314660..75314675,+ | |||
|id=chr17:75314660..75314675,+ | |||
|ontology_enrichment_celltype=CL:0000148!2.96e-14!10;CL:0000541!2.96e-14!10;CL:0000147!1.17e-12!14;CL:0002567!4.44e-10!3;CL:0000325!3.76e-08!39;CL:0002536!5.60e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002567;2.69e-66;3!CL:0000148;1.25e-35;10!CL:0000147;1.27e-25;14!CL:0000710;4.26e-18;20!CL:0000075;1.59e-13;27!CL:0002262;2.90e-12;2!CL:1000398;2.90e-12;2!CL:0002077;6.80e-10;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,3.76e-66,3;CL:0000148,1.37e-35,10;CL:0000541,1.37e-35,10;CL:0000147,1.35e-25,14;CL:0000710,4.45e-18,20;CL:0000075,1.64e-13,27;CL:0002262,2.59e-12,2;CL:1000398,2.59e-12,2;CL:0002077,8.16e-11,34;CL:0000333,1.26e-08,41 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.30e-08;3 | |||
|ontology_enrichment_disease=DOID:1909!2.55e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;6.25e-45;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.00e-45,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.90e-12;2!UBERON:0003497;2.90e-12;2!UBERON:0003909;2.90e-12;2!UBERON:0003835;2.90e-12;2!UBERON:0001280;1.30e-08;3!UBERON:0004647;1.30e-08;3!UBERON:0001003;7.41e-07;15!UBERON:0007376;7.41e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.59e-12,2;UBERON:0003497,2.59e-12,2;UBERON:0003909,2.59e-12,2;UBERON:0003835,2.59e-12,2;UBERON:0001280,1.21e-08,3;UBERON:0004647,1.21e-08,3;UBERON:0005171,1.21e-08,3;UBERON:0001003,6.99e-07,15;UBERON:0007376,6.99e-07,15;UBERON:0007383,6.99e-07,15 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0.631719873426831,0,0,0,0.655324116390517,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0.888970520090367,1.14596527667483,2.34434894420094,3.4214489204541,0.616964956219941,0.600686115687835,3.71574362419752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,0,0,0.280660094433074,0,0,0,0,0.154209693802656,0,0.246381468041427,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,1.19472429772959,0,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,5.91431558412426,1.42732666772484,0,0,0,0.298509605773748,0.467426619694449,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0.131545547125698,0,0,0.078493092850514,0,0,0,0,0.47775168788705,1.07214816264985,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0.713921808193872,0,0.735159196278759,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:75314660..75314675,+ | |||
}} |
Latest revision as of 21:41, 25 July 2015
Short description: | p@chr17:75314660..75314675, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:75314660..75314675, + |
Coexpression cluster: | C177_melanoma_Melanocyte_mesenchymal_retina_Mallassezderived_Gingival_squamous |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 3.76e-66 | 3 |
melanocyte | 1.37e-35 | 10 |
melanoblast | 1.37e-35 | 10 |
pigment cell | 1.35e-25 | 14 |
neurecto-epithelial cell | 4.45e-18 | 20 |
columnar/cuboidal epithelial cell | 1.64e-13 | 27 |
endothelial cell of sinusoid | 2.59e-12 | 2 |
endothelial cell of hepatic sinusoid | 2.59e-12 | 2 |
ecto-epithelial cell | 8.16e-11 | 34 |
migratory neural crest cell | 1.26e-08 | 41 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.59e-12 | 2 |
abdomen blood vessel | 2.59e-12 | 2 |
sinusoid | 2.59e-12 | 2 |
abdominal segment blood vessel | 2.59e-12 | 2 |
liver parenchyma | 1.21e-08 | 3 |
liver lobule | 1.21e-08 | 3 |
hepatic duct | 1.21e-08 | 3 |
skin epidermis | 6.99e-07 | 15 |
outer epithelium | 6.99e-07 | 15 |
enveloping layer of ectoderm | 6.99e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.00e-45 | 2 |