FFCP PHASE1:Hg19::chr8:56792355..56792369,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:56792355..56792369,+
|short_description=p2@LYN
|description=CAGE_peak_2_at_LYN_5end
|association_with_transcript=-2bp_to_ENST00000519728_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4067 | |EntrezGene=4067 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6735 | |HGNC=6735 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-2bp_to_ENST00000519728_5end | |||
|cluster_id=chr8:56792355..56792369,+ | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_2_at_LYN_5end | |||
|id=chr8:56792355..56792369,+ | |||
|ontology_enrichment_celltype=CL:0000763!2.31e-45!112;CL:0000049!2.31e-45!112;CL:0000037!1.36e-39!172;CL:0000566!1.36e-39!172;CL:0000988!6.56e-38!182;CL:0002032!1.33e-37!165;CL:0000837!1.33e-37!165;CL:0000766!4.88e-35!76;CL:0000557!2.11e-31!71;CL:0000738!2.03e-30!140;CL:0000839!2.88e-28!70;CL:0002009!2.95e-28!65;CL:0002194!3.53e-27!63;CL:0000576!3.53e-27!63;CL:0000040!3.53e-27!63;CL:0000559!3.53e-27!63;CL:0002057!4.50e-27!42;CL:0000860!4.58e-25!45;CL:0002031!5.40e-22!124;CL:0002087!4.43e-21!119;CL:0002393!5.25e-07!9;CL:0002397!5.25e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.26e-20;33!CL:0002057;1.26e-20;33!CL:0000473;3.19e-19;39!CL:0000234;3.19e-19;39!CL:0000576;3.85e-18;48!CL:0000766;4.73e-17;69!CL:0000763;1.36e-14;100!CL:0000738;1.81e-08;136!CL:0000988;7.42e-08;177!CL:0002087;1.13e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.16e-48,108;CL:0000049,1.16e-48,108;CL:0000037,2.18e-43,168;CL:0000988,1.52e-41,177;CL:0002032,4.40e-41,161;CL:0000837,4.40e-41,161;CL:0000766,3.17e-38,72;CL:0000557,2.27e-34,67;CL:0000738,8.93e-34,136;CL:0002009,4.51e-31,61;CL:0000839,6.50e-31,66;CL:0000473,2.77e-30,48;CL:0000234,2.77e-30,48;CL:0002194,6.13e-30,59;CL:0000576,6.13e-30,59;CL:0000040,6.13e-30,59;CL:0000559,6.13e-30,59;CL:0000860,3.83e-28,42;CL:0002057,3.83e-28,42;CL:0002031,1.68e-24,120;CL:0002087,1.42e-23,115;CL:0002393,3.10e-07,9;CL:0002397,3.10e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-20;42!CL:0000049;1.75e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!2.42e-09!31;DOID:1240!3.99e-07!39;DOID:2531!8.18e-07!51;DOID:0060083!8.18e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.96e-09;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.13e-09,31;DOID:1240,5.16e-08,39;DOID:2531,1.55e-07,51;DOID:0060083,1.55e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002193!1.22e-32!112;UBERON:0002390!5.53e-32!102;UBERON:0003061!5.53e-32!102;UBERON:0002371!1.77e-24!80;UBERON:0002405!3.64e-23!115;UBERON:0001474!6.79e-21!86;UBERON:0004765!9.25e-16!101;UBERON:0001434!9.25e-16!101;UBERON:0003081!1.14e-09!216;UBERON:0000178!1.64e-08!15;UBERON:0000179!1.64e-08!15;UBERON:0000463!1.64e-08!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.79e-09;15!UBERON:0000179;6.79e-09;15!UBERON:0000463;6.79e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.77e-35,108;UBERON:0002390,5.15e-35,98;UBERON:0003061,5.15e-35,98;UBERON:0002405,2.34e-27,93;UBERON:0002371,2.57e-27,76;UBERON:0001474,2.28e-23,82;UBERON:0004765,5.22e-18,90;UBERON:0001434,5.22e-16,100;UBERON:0003081,4.33e-10,203;UBERON:0000178,8.40e-09,15;UBERON:0000179,8.40e-09,15;UBERON:0000463,8.40e-09,15 | |||
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| ||
|short_description=p2@LYN | |||
}} | }} |
Latest revision as of 13:09, 18 September 2015
Short description: | p2@LYN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LYN_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -2bp_to_ENST00000519728_5end |
EntrezGene: | LYN |
HGNC: | 6735 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.16e-48 | 108 |
common myeloid progenitor | 1.16e-48 | 108 |
hematopoietic stem cell | 2.18e-43 | 168 |
hematopoietic cell | 1.52e-41 | 177 |
hematopoietic oligopotent progenitor cell | 4.40e-41 | 161 |
hematopoietic multipotent progenitor cell | 4.40e-41 | 161 |
myeloid leukocyte | 3.17e-38 | 72 |
granulocyte monocyte progenitor cell | 2.27e-34 | 67 |
leukocyte | 8.93e-34 | 136 |
macrophage dendritic cell progenitor | 4.51e-31 | 61 |
myeloid lineage restricted progenitor cell | 6.50e-31 | 66 |
defensive cell | 2.77e-30 | 48 |
phagocyte | 2.77e-30 | 48 |
monopoietic cell | 6.13e-30 | 59 |
monocyte | 6.13e-30 | 59 |
monoblast | 6.13e-30 | 59 |
promonocyte | 6.13e-30 | 59 |
classical monocyte | 3.83e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.83e-28 | 42 |
hematopoietic lineage restricted progenitor cell | 1.68e-24 | 120 |
nongranular leukocyte | 1.42e-23 | 115 |
intermediate monocyte | 3.10e-07 | 9 |
CD14-positive, CD16-positive monocyte | 3.10e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.77e-35 | 108 |
hematopoietic system | 5.15e-35 | 98 |
blood island | 5.15e-35 | 98 |
immune system | 2.34e-27 | 93 |
bone marrow | 2.57e-27 | 76 |
bone element | 2.28e-23 | 82 |
skeletal element | 5.22e-18 | 90 |
skeletal system | 5.22e-16 | 100 |
lateral plate mesoderm | 4.33e-10 | 203 |
blood | 8.40e-09 | 15 |
haemolymphatic fluid | 8.40e-09 | 15 |
organism substance | 8.40e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.13e-09 | 31 |
leukemia | 5.16e-08 | 39 |
hematologic cancer | 1.55e-07 | 51 |
immune system cancer | 1.55e-07 | 51 |