FFCP PHASE1:Hg19::chr8:68255738..68255745,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:68255738..68255745,-
|short_description=p11@ARFGEF1
|description=CAGE_peak_11_at_ARFGEF1_5end
|association_with_transcript=166bp_to_ENST00000262215,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10565 | |EntrezGene=10565 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15772 | |HGNC=15772 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y6D6,E5RJN9 | |UniProt=Q9Y6D6,E5RJN9 | ||
|association_with_transcript=166bp_to_ENST00000262215,ENST00000519436,NM_006421,uc003xxo.1_5end | |||
|cluster_id=chr8:68255738..68255745,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_11_at_ARFGEF1_5end | |||
|id=chr8:68255738..68255745,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000775;1.17e-31;3!CL:0000094;2.90e-12;8!CL:0002032;2.96e-11;1!CL:0000557;2.96e-11;1!CL:0002581;2.96e-11;1!CL:0000081;4.65e-09;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,1.17e-31,3;CL:0000094,2.91e-12,8;CL:0002581,2.42e-11,1;CL:0000081,4.66e-09,11 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.61e-14;3!UBERON:0010226;1.24e-11;1!UBERON:0005425;2.96e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.25e-22!115;UBERON:0001049!1.01e-14!57;UBERON:0005068!1.01e-14!57;UBERON:0006241!1.01e-14!57;UBERON:0007135!1.01e-14!57;UBERON:0002616!9.91e-13!59;UBERON:0002780!4.20e-11!41;UBERON:0001890!4.20e-11!41;UBERON:0006240!4.20e-11!41;UBERON:0003080!1.26e-10!42;UBERON:0000955!1.16e-09!69;UBERON:0006238!1.16e-09!69;UBERON:0003075!2.88e-09!86;UBERON:0007284!2.88e-09!86;UBERON:0002346!2.72e-08!90;UBERON:0002020!3.56e-08!34;UBERON:0003528!3.56e-08!34;UBERON:0001017!3.78e-08!82;UBERON:0000073!6.19e-08!94;UBERON:0001016!6.19e-08!94;UBERON:0005743!7.70e-08!86;UBERON:0001893!9.66e-08!34;UBERON:0002791!2.04e-07!33;UBERON:0001869!6.75e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.24e-11;1!UBERON:0002082;1.24e-11;1!UBERON:0000941;2.96e-11;1!UBERON:0001785;2.96e-11;1!UBERON:0002464;2.96e-11;1!UBERON:0004904;2.96e-11;1!UBERON:0001021;2.96e-11;1!UBERON:0002037;1.57e-07;6!UBERON:0004732;2.05e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.18e-11,1;UBERON:0002082,1.18e-11,1;UBERON:0010226,1.18e-11,1;UBERON:0000941,2.68e-11,1;UBERON:0001785,2.68e-11,1;UBERON:0002464,2.68e-11,1;UBERON:0004904,2.68e-11,1;UBERON:0001021,2.68e-11,1;UBERON:0003902,2.68e-11,1;UBERON:0005425,2.68e-11,1;UBERON:0002037,1.17e-07,6;UBERON:0006215,1.17e-07,6;UBERON:0004732,1.64e-07,13 | |||
|phase1_expression=0,0.428201047781966,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0,0.313454721478088,0,0.273748850145768,0,0.0764134057479513,0,0.157421562627358,0,0.383829398097213,0.154816123316076,0,0,0,0.309868802321207,0.142169232487422,0.293600439334847,0,0.401088894940283,0.434021741431704,0.223915474239924,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0.863077176966451,0.512321413058201,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0.426224750532694,0.290209238628584,1.13477044938228,0.622822248995575,0,0,0.217188844705117,0.605399502633369,0,0.316462387440884,0.422510572623884,0,0,0,0.150176892841506,0.16072558669708,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0,0.393419540227666,0,0,0.334372990781356,0.32592226663359,0,0,0.111410456885174,0,0.221533894583621,0,0.384273959177026,0.390178042679635,1.15106533222573,0.552700035571697,0,0.14828656316206,0.267540828089713,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0.323292113637624,0,0.201504196455281,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58040879591855,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0.176096868026452,0.207328115540772,0,0,0,0,1.17217447210047,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0.431255149719035,0.513372145118994,0.254094624222463,0,0,0,0,8.23907726341901,5.9832291840805,9.11714129559278,0,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0.128139149255701,0,0,1.48418066444991,0,0,0.0821271560138091,0,0,0,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272999822815972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0.670302275535787,0,0.188287601553558,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0.1605880751037,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.844016498463076,0.222617410045812,0,0,0.398495976502139,0,0,0,0.123084805461069,0,0,0,0,0,2.3948309234694,0,0,0.371072392647405,0,0,0.0874599999961957,0,0,0.508507300585533,0,0,0,0.173624994933292,0,0.361789315876224,1.52581736317083,0.331737779793674,1.77328571372128,0,0,0,0.0769502585037971,0,0.23056390438806,0,0.108647371922008,0,0,0,1.02193298195737,0,0,0,0,0,0.189753732724185,0,0,0.326465616318295,0,0,0,0,0,0,0.123563938946503,0,0.067401132980677,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277349346026277,0,0.0979923974143777,0,0.34945333648406,0.171986032471617,0,0.0730893170861856,0,0.193978032976839,0,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0.600420288709789,0,1.27746588066972,0,0,0,0.229160424011684,0.717873024576814,0,0.429226048136571,0.446342914883745,0.403100834920358,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0.795229689809303,0.681017030557878,0,0,0,0.2249738915515,0,0.121499113316049,0,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0,0.714695326373367,2.64836788146173,0,0,0,0,0,0,0.170388021785422,0.113312091520126,0,0,0.129282956361551,0.79339561045614,0,0,0.213574825135389,0.157204305099666,0.414239055347196,0.992332043623902,0.197611631897944,0,0.638341257770182,0,0,0,0,0,0,0,0.500763722825999,0,0.221858103073705,0.18628920882415,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0.414706207840855,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0,0,0,0.192914038270915,0,0,0,0,0.691292180758654,0.194860308839388,0.265729680626726,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.192687675289379,0,0.478901577171454,0.41023272848151,0.252071696221718,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0.231051332300676,0,0,0.198916222116275,0,0,0,0,0,0.147856086217045,0.135075169236789,0,0.826747186004736,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,0.672567444437648,0,0.91064876540519,0.0887023701626388,0,0,0.135939465953663,0.197318320688547,0,0,0,0.157115589916002,0,0,0,0.47775168788705,0.2859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| ||
|short_description=p11@ARFGEF1 | |||
}} | }} |
Latest revision as of 22:19, 18 September 2015
Short description: | p11@ARFGEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ARFGEF1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 166bp_to_ENST00000262215, ENST00000519436, NM_006421, uc003xxo.1_5end |
EntrezGene: | ARFGEF1 |
HGNC: | 15772 |
UniProt: | Q9Y6D6E5RJN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 1.17e-31 | 3 |
granulocyte | 2.91e-12 | 8 |
perirenal preadipocyte | 2.42e-11 | 1 |
blood cell | 4.66e-09 | 11 |
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.18e-11 | 1 |
cardiac ventricle | 1.18e-11 | 1 |
future cardiac ventricle | 1.18e-11 | 1 |
cranial nerve II | 2.68e-11 | 1 |
cranial nerve | 2.68e-11 | 1 |
nerve trunk | 2.68e-11 | 1 |
nerve connecting eye with brain | 2.68e-11 | 1 |
nerve | 2.68e-11 | 1 |
retinal neural layer | 2.68e-11 | 1 |
presumptive neural retina | 2.68e-11 | 1 |
cerebellum | 1.17e-07 | 6 |
rhombic lip | 1.17e-07 | 6 |
segmental subdivision of nervous system | 1.64e-07 | 13 |