FFCP PHASE1:Hg19::chr19:4832054..4832058,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:4832054..4832058,+ | |||
|coexpression_cluster_id=C1388 | |||
|description=CAGE_peak_at_chr19:4832054..4832058,+ | |||
|id=chr19:4832054..4832058,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.18e-25!42;CL:0000860!1.64e-24!45;CL:0000557!2.56e-18!71;CL:0002031!6.30e-18!124;CL:0000738!1.32e-17!140;CL:0002087!3.93e-17!119;CL:0002009!8.16e-17!65;CL:0002194!1.35e-15!63;CL:0000576!1.35e-15!63;CL:0000040!1.35e-15!63;CL:0000559!1.35e-15!63;CL:0000839!1.83e-15!70;CL:0000766!7.42e-15!76;CL:0000037!7.77e-14!172;CL:0000566!7.77e-14!172;CL:0000988!4.29e-13!182;CL:0002032!1.27e-12!165;CL:0000837!1.27e-12!165;CL:0000763!5.30e-10!112;CL:0000049!5.30e-10!112;CL:0000012!6.87e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.21e-43;33!CL:0002057;3.21e-43;33!CL:0000576;9.89e-33;48!CL:0000473;5.11e-29;39!CL:0000234;5.11e-29;39!CL:0000766;2.87e-22;69!CL:0002393;4.43e-19;6!CL:0002397;4.43e-19;6!CL:0002087;3.19e-12;104!CL:0000763;1.01e-09;100!CL:0000738;1.81e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.86e-58,42;CL:0002057,1.86e-58,42;CL:0000473,3.80e-50,48;CL:0000234,3.80e-50,48;CL:0000557,8.85e-47,67;CL:0000839,1.62e-41,66;CL:0000766,3.46e-40,72;CL:0002009,4.27e-40,61;CL:0002194,1.59e-38,59;CL:0000576,1.59e-38,59;CL:0000040,1.59e-38,59;CL:0000559,1.59e-38,59;CL:0000738,1.93e-33,136;CL:0002031,5.81e-31,120;CL:0000037,7.70e-30,168;CL:0000763,1.13e-29,108;CL:0000049,1.13e-29,108;CL:0002087,4.40e-29,115;CL:0000988,9.29e-28,177;CL:0002032,5.57e-25,161;CL:0000837,5.57e-25,161;CL:0002393,6.77e-13,9;CL:0002397,6.77e-13,9;CL:0000134,2.98e-11,354;CL:0002320,8.24e-11,361;CL:0000219,2.91e-09,386;CL:0000034,1.42e-08,441;CL:0000048,1.49e-08,427;CL:0000723,2.84e-08,433 | |||
|ontology_enrichment_development_v019=CL:0002057;9.01e-42;42!CL:0000049;7.71e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.94e-17!80;UBERON:0002193!1.01e-16!112;UBERON:0002390!7.85e-16!102;UBERON:0003061!7.85e-16!102;UBERON:0001474!1.81e-14!86;UBERON:0004765!6.57e-12!101;UBERON:0001434!6.57e-12!101;UBERON:0002405!8.08e-12!115;UBERON:0002204!2.26e-09!167;UBERON:0003081!1.48e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.02e-46,76;UBERON:0001474,7.14e-42,82;UBERON:0002405,3.60e-38,93;UBERON:0002390,3.62e-38,98;UBERON:0003061,3.62e-38,98;UBERON:0004765,2.36e-37,90;UBERON:0002193,7.45e-36,108;UBERON:0001434,1.03e-32,100;UBERON:0002204,1.67e-19,167;UBERON:0003081,1.36e-16,203;UBERON:0002384,3.28e-10,371;UBERON:0000926,1.58e-08,315;UBERON:0004120,1.58e-08,315;UBERON:0006603,1.58e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975865597581014,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0,1.14620108621927,0.903106483949403,0.157421562627358,0.786728553697808,0,2.94150634300544,1.83884244895785,0.90361775633475,1.10926203050036,0,0.284338464974843,4.40400659002271,1.66198622559563,5.81578897663411,8.24641308720237,0,0,0,0.726991193897824,0.377875943688809,0,0.929716147622738,2.46700732813095,1.23882548358041,2.58923153089935,2.0492856522328,3.31075121844019,4.13694816883942,2.5819387343353,1.35426486594342,0.941211697713023,1.36453075028923,1.12361742222542,3.97909060082173,0.962787081228281,2.55734850319616,0,1.39624560335142,0.852449501065388,2.61188314765726,5.10646702222026,0,2.51248665256743,2.60741459210101,2.38907729175628,1.81619850790011,1.10483290796269,3.48108626184973,1.26753171787165,1.91343869968539,1.67726916406701,1.01095768031846,1.05123824989054,0,0.285012743741249,0.79566670879636,0,0,0,0,0.426730222566507,0,0.574752439954483,0,1.90810750907073,0,1.17447437874188,2.29363936875137,0,3.92355994087075,0.790152254325231,0.196709770113833,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0.25618263945135,0.520237390239513,0,0,0,0,0,1.04535523804977,0.113309342697566,0,0.34362744548263,0,0,0,0,0.451725357233318,0,0,0,0,0.201606743224732,0.267440195783507,0.144824403882799,0,0,0.12786256184353,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0.324547393654683,0,0,0.476981248610684,0,1.85728750664782,0,0,0.347140501607594,0,0.419499436209906,0.275118041940067,0.417989933073621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.860509862246441,0,0.560677600142307,0,0,0,0.134710672069688,0,0,0,0,0,0,0.597794722207204,0.117434498643765,0.323745888736263,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0.612975591598039,0.150238058906597,0,0,0,0.211931901159562,0.300091096084402,0.103052529238439,0,0,0.337552664482532,0,0,0,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.464367928031979,0,0.354920400119532,0.168584690078102,0.241011029883482,0,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0.185176890317059,0,0,1.44331342025273,0,0.117408694235822,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0.234004265139238,0,0,0,0.141775097242386,0.358234090811393,0,1.15014803749563,0,0,1.03664057770386,1.44119953416961,1.13618190083742,0,0,0,0,0.102827492703324,0,0.285826432630578,0.224262168690721,0,0,0.258543431515556,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,1.58390374586686,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.394061520403854,0.215627574859517,1.54011643535698,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0.271265023699736,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,4.31428401637234,1.49418580924822,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.616838775210622,0.355123450626254,0.410635780069046,0,0.697262270759755,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0.460511024178389,0.551346289938122,0,0,0.0852266274161009,0.0890320356467374,0,0,0.510450849978337,0,0,0.31481234683064,0,0,0.532306030317022,0,0.37064843820784,0,0,0,0,0.255897791311334,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0,0.243713489631284,1.05650146756755,0,0.282810863907425,0,0,0,0,0,0,0.202910376962704,0,1.12678241012897,0.286822704408103,0.0982490410131212,0,0.709522128141196,0.422215270595328,0,0,0,0.192444225451024,2.01090682660736,3.26672954583968,0,0,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0,0.79312517629427,0,0,0.245040215981032,0,0.144269212976445,0,0,0.199579371432817,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0.37428108081644,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0.111308705022906,0.988823245360557,0,0.398495976502139,0,0,0,0.123084805461069,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0.874813840149763,0.173624994933292,0,0,0,0,0,0,0.21787692703798,0.139423744278603,0.0769502585037971,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0.189753732724185,0.317873157960757,0.421996129056054,0.326465616318295,0,0,0,0.0884575645033392,0,0.889563386041866,0.247127877893006,0.208843899010911,0,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,1.20258735531594,0,0,0,0,0,0,0,0,0,0.261177619741208,0,0.171986032471617,0,0.146178634172371,0.0821154570532092,0,0,0,0.137041924646751,0.19871461170299,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0.543616824294456,0.313808538937,0.305994652908965,0,0,0,1.27746588066972,0,1.05154941711726,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.169346664131569,0,0.136203406111576,0,0,0,0.449947783103001,7.7380195455795,0,0,0,0,0.105600336519406,0,0,0,0,0.5085370753095,0,0,0.326587360109409,0,0,0,0.339936274560377,0,0,0.129282956361551,0,0,0,0.213574825135389,0,0,1.48849806543585,0,0.365377795142688,0,0,0.2506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| |||
|short_description=p@chr19:4832054..4832058,+ | |||
}} |
Latest revision as of 15:36, 27 July 2015
Short description: | p@chr19:4832054..4832058, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:4832054..4832058, + |
Coexpression cluster: | C1388_immature_CD14_Basophils_Mast_CD133_Peripheral_Natural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.86e-58 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.86e-58 | 42 |
defensive cell | 3.80e-50 | 48 |
phagocyte | 3.80e-50 | 48 |
granulocyte monocyte progenitor cell | 8.85e-47 | 67 |
myeloid lineage restricted progenitor cell | 1.62e-41 | 66 |
myeloid leukocyte | 3.46e-40 | 72 |
macrophage dendritic cell progenitor | 4.27e-40 | 61 |
monopoietic cell | 1.59e-38 | 59 |
monocyte | 1.59e-38 | 59 |
monoblast | 1.59e-38 | 59 |
promonocyte | 1.59e-38 | 59 |
leukocyte | 1.93e-33 | 136 |
hematopoietic lineage restricted progenitor cell | 5.81e-31 | 120 |
hematopoietic stem cell | 7.70e-30 | 168 |
myeloid cell | 1.13e-29 | 108 |
common myeloid progenitor | 1.13e-29 | 108 |
nongranular leukocyte | 4.40e-29 | 115 |
hematopoietic cell | 9.29e-28 | 177 |
hematopoietic oligopotent progenitor cell | 5.57e-25 | 161 |
hematopoietic multipotent progenitor cell | 5.57e-25 | 161 |
intermediate monocyte | 6.77e-13 | 9 |
CD14-positive, CD16-positive monocyte | 6.77e-13 | 9 |
mesenchymal cell | 2.98e-11 | 354 |
connective tissue cell | 8.24e-11 | 361 |
motile cell | 2.91e-09 | 386 |
stem cell | 1.42e-08 | 441 |
multi fate stem cell | 1.49e-08 | 427 |
somatic stem cell | 2.84e-08 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.02e-46 | 76 |
bone element | 7.14e-42 | 82 |
immune system | 3.60e-38 | 93 |
hematopoietic system | 3.62e-38 | 98 |
blood island | 3.62e-38 | 98 |
skeletal element | 2.36e-37 | 90 |
hemolymphoid system | 7.45e-36 | 108 |
skeletal system | 1.03e-32 | 100 |
musculoskeletal system | 1.67e-19 | 167 |
lateral plate mesoderm | 1.36e-16 | 203 |
connective tissue | 3.28e-10 | 371 |
mesoderm | 1.58e-08 | 315 |
mesoderm-derived structure | 1.58e-08 | 315 |
presumptive mesoderm | 1.58e-08 | 315 |