FFCP PHASE1:Hg19::chr1:206945754..206945768,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3586 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5962 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=265bp_to_uc009xbx.2_5end | |||
|cluster_id=chr1:206945754..206945768,- | |||
|coexpression_cluster_id=C1125 | |||
|description=CAGE_peak_5_at_IL10_5end | |||
|id=chr1:206945754..206945768,- | |||
|ontology_enrichment_celltype=CL:0002194!4.85e-60!63;CL:0000576!4.85e-60!63;CL:0000040!4.85e-60!63;CL:0000559!4.85e-60!63;CL:0002009!1.06e-57!65;CL:0002057!3.24e-57!42;CL:0000766!7.51e-54!76;CL:0000860!1.72e-52!45;CL:0000839!1.94e-52!70;CL:0000557!1.79e-51!71;CL:0002087!4.93e-44!119;CL:0000738!2.40e-40!140;CL:0002031!3.22e-38!124;CL:0000763!2.56e-35!112;CL:0000049!2.56e-35!112;CL:0000988!2.71e-32!182;CL:0000037!2.65e-31!172;CL:0000566!2.65e-31!172;CL:0002032!6.55e-31!165;CL:0000837!6.55e-31!165;CL:0000080!9.42e-08!6;CL:0000134!1.03e-07!358;CL:0002320!3.08e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.22e-85;39!CL:0000234;2.22e-85;39!CL:0000860;2.37e-78;33!CL:0002057;2.37e-78;33!CL:0000576;4.19e-46;48!CL:0000766;3.46e-32;69!CL:0000235;6.42e-25;6!CL:0000763;5.03e-18;100!CL:0002087;1.06e-17;104!CL:0002619;2.00e-13;3!CL:0000738;1.74e-11;136!CL:0000988;2.48e-09;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.69e-87,48;CL:0000234,5.69e-87,48;CL:0002194,3.56e-82,59;CL:0000576,3.56e-82,59;CL:0000040,3.56e-82,59;CL:0000559,3.56e-82,59;CL:0002009,2.93e-79,61;CL:0000839,9.81e-73,66;CL:0000557,1.52e-71,67;CL:0000766,6.21e-70,72;CL:0000860,1.69e-65,42;CL:0002057,1.69e-65,42;CL:0002087,3.52e-55,115;CL:0002031,1.56e-52,120;CL:0000738,9.15e-48,136;CL:0000763,4.41e-44,108;CL:0000049,4.41e-44,108;CL:0000988,8.64e-41,177;CL:0002032,5.29e-39,161;CL:0000837,5.29e-39,161;CL:0000037,5.17e-37,168;CL:0000235,4.33e-25,6;CL:0000134,9.45e-14,354;CL:0002619,1.88e-13,3;CL:0002320,2.64e-13,361;CL:0000219,9.86e-12,386;CL:0000048,8.27e-10,427;CL:0000723,1.52e-09,433;CL:0000034,3.36e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.10e-49;42!CL:0000049;1.65e-15;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.15e-50!102;UBERON:0003061!3.15e-50!102;UBERON:0002371!9.70e-46!80;UBERON:0002193!1.13e-45!112;UBERON:0001474!2.04e-41!86;UBERON:0002405!3.94e-40!115;UBERON:0004765!7.15e-33!101;UBERON:0001434!7.15e-33!101;UBERON:0003081!8.73e-18!216;UBERON:0002204!1.14e-14!167;UBERON:0000062!3.86e-07!511;UBERON:0002384!5.20e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.18e-62,76;UBERON:0002390,4.54e-59,98;UBERON:0003061,4.54e-59,98;UBERON:0001474,3.92e-57,82;UBERON:0002193,7.48e-53,108;UBERON:0002405,9.05e-53,93;UBERON:0004765,2.18e-51,90;UBERON:0001434,1.74e-45,100;UBERON:0003081,3.68e-24,203;UBERON:0002204,4.61e-24,167;UBERON:0002384,1.07e-12,371;UBERON:0000926,1.77e-12,315;UBERON:0004120,1.77e-12,315;UBERON:0006603,1.77e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.164201178899891,0,0.786728553697808,1.15148819429164,0.77408061658038,0,0,0,0,0,0,0,0.601633342410425,0.217010870715852,2.46307021663917,2.59114932815184,4.37878464978117,2.32637182047304,1.88937971844405,1.21292030593908,3.95129362739664,5.75635043230556,1.23882548358041,3.16461631554365,1.0246428261164,0.709446689665756,2.75796544589295,3.87290810150296,5.41705946377367,2.82363509313907,1.91034305040492,1.57306439111559,3.67300670845083,1.60464513538047,1.91801137739712,1.64925650093358,4.18873681005427,2.13112375266347,3.77272010217159,5.10646702222026,8.09668923694247,4.77372463987812,0.521482918420201,1.52032191293582,1.81619850790011,1.84138817993782,0.949387162322653,0.422510572623884,0.212604299965044,0.628975936525128,0.673971786878971,0.300353785683013,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348259474598534,0.664789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69325509131096,1.8720341211139,1.93220510975347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.08118903205952,7.03159928004977,2.10833939483032,0,0,0,0,0,0,8.29430065552102,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.82707210449155,0.862856803274467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,25.5446005051477,0,0.19924798825107,0,0,0,2.33861130376032,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,2.6686901581256,2.47127877893006,1.67075119208729,0.471807930864739,0,0,0,0,0,0.394584402849391,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0.451961481561065,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.09795856554149,0.279282401272254,0,0,0.399358000997982,0,0,0.201550417460179,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,0.26446520348538,0,0,0.427149650270779,0.157204305099666,0,0,0,1.21792598380896,0,0.544017803369474,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.0887023701626388,4.14842355200805,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.297046400327086,0,0,0.563903507879121,0.257831551894309,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0.129177819672012,0.372448285775147,0,0.0636471582781649,0,0,0.342233301085281,0.202056159043763,0.573777643141411,0,0,0,0,0,0,0,0,0,0,0.961705476909699 | |||
|short_description=p5@IL10 | |||
}} |
Latest revision as of 05:55, 20 September 2015
Short description: | p5@IL10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IL10_5end |
Coexpression cluster: | C1125_anaplastic_CD14_CD14CD16_acute_Macrophage_Dendritic_Monocytederived |
Association with transcript: | 265bp_to_uc009xbx.2_5end |
EntrezGene: | IL10 |
HGNC: | 5962 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.69e-87 | 48 |
phagocyte | 5.69e-87 | 48 |
monopoietic cell | 3.56e-82 | 59 |
monocyte | 3.56e-82 | 59 |
monoblast | 3.56e-82 | 59 |
promonocyte | 3.56e-82 | 59 |
macrophage dendritic cell progenitor | 2.93e-79 | 61 |
myeloid lineage restricted progenitor cell | 9.81e-73 | 66 |
granulocyte monocyte progenitor cell | 1.52e-71 | 67 |
myeloid leukocyte | 6.21e-70 | 72 |
classical monocyte | 1.69e-65 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.69e-65 | 42 |
nongranular leukocyte | 3.52e-55 | 115 |
hematopoietic lineage restricted progenitor cell | 1.56e-52 | 120 |
leukocyte | 9.15e-48 | 136 |
myeloid cell | 4.41e-44 | 108 |
common myeloid progenitor | 4.41e-44 | 108 |
hematopoietic cell | 8.64e-41 | 177 |
hematopoietic oligopotent progenitor cell | 5.29e-39 | 161 |
hematopoietic multipotent progenitor cell | 5.29e-39 | 161 |
hematopoietic stem cell | 5.17e-37 | 168 |
macrophage | 4.33e-25 | 6 |
mesenchymal cell | 9.45e-14 | 354 |
adult endothelial progenitor cell | 1.88e-13 | 3 |
connective tissue cell | 2.64e-13 | 361 |
motile cell | 9.86e-12 | 386 |
multi fate stem cell | 8.27e-10 | 427 |
somatic stem cell | 1.52e-09 | 433 |
stem cell | 3.36e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.18e-62 | 76 |
hematopoietic system | 4.54e-59 | 98 |
blood island | 4.54e-59 | 98 |
bone element | 3.92e-57 | 82 |
hemolymphoid system | 7.48e-53 | 108 |
immune system | 9.05e-53 | 93 |
skeletal element | 2.18e-51 | 90 |
skeletal system | 1.74e-45 | 100 |
lateral plate mesoderm | 3.68e-24 | 203 |
musculoskeletal system | 4.61e-24 | 167 |
connective tissue | 1.07e-12 | 371 |
mesoderm | 1.77e-12 | 315 |
mesoderm-derived structure | 1.77e-12 | 315 |
presumptive mesoderm | 1.77e-12 | 315 |