FFCP PHASE1:Hg19::chr1:25291648..25291665,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=864 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10473 | |||
|TSSclassifier=strong | |||
|UniProt=O14814 | |||
|association_with_transcript=-36bp_to_ENST00000479341,uc009vrl.1_5end | |||
|cluster_id=chr1:25291648..25291665,- | |||
|description=CAGE_peak_7_at_RUNX3_5end | |||
|id=chr1:25291648..25291665,- | |||
|ontology_enrichment_celltype=CL:0002087!6.89e-53!119;CL:0000738!1.79e-50!140;CL:0002031!4.11e-46!124;CL:0000037!4.58e-46!172;CL:0000566!4.58e-46!172;CL:0000988!5.94e-45!182;CL:0002032!1.56e-44!165;CL:0000837!1.56e-44!165;CL:0002057!1.22e-31!42;CL:0000860!1.50e-28!45;CL:0002009!1.20e-26!65;CL:0002194!2.02e-25!63;CL:0000576!2.02e-25!63;CL:0000040!2.02e-25!63;CL:0000559!2.02e-25!63;CL:0000542!1.41e-23!53;CL:0000051!1.41e-23!53;CL:0000557!5.29e-23!71;CL:0000838!1.21e-22!52;CL:0000839!2.65e-21!70;CL:0000763!1.07e-20!112;CL:0000049!1.07e-20!112;CL:0000766!1.68e-20!76;CL:0000134!4.10e-20!358;CL:0002320!1.43e-19!365;CL:0000219!1.57e-16!390;CL:0000084!1.26e-12!25;CL:0000827!1.26e-12!25;CL:0000048!5.47e-11!430;CL:0000945!1.09e-10!24;CL:0000826!1.09e-10!24;CL:0000791!1.75e-10!18;CL:0000789!1.75e-10!18;CL:0002420!1.75e-10!18;CL:0002419!1.75e-10!18;CL:0000790!1.75e-10!18;CL:0000723!2.28e-10!436;CL:0000034!5.55e-10!444;CL:0000625!5.23e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.51e-49;33!CL:0002057;7.51e-49;33!CL:0000473;3.21e-37;39!CL:0000234;3.21e-37;39!CL:0000576;5.20e-24;48!CL:0002087;3.38e-14;104!CL:0000766;2.89e-13;69!CL:0000738;2.40e-08;136!CL:0000763;3.63e-08;100!CL:0000945;2.14e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.22e-42,115;CL:0000860,3.82e-40,42;CL:0002057,3.82e-40,42;CL:0000473,1.02e-36,48;CL:0000234,1.02e-36,48;CL:0000738,2.82e-35,136;CL:0002031,2.98e-34,120;CL:0002194,4.10e-32,59;CL:0000576,4.10e-32,59;CL:0000040,4.10e-32,59;CL:0000559,4.10e-32,59;CL:0002009,8.53e-31,61;CL:0000037,6.85e-29,168;CL:0000988,5.18e-28,177;CL:0002032,7.46e-28,161;CL:0000837,7.46e-28,161;CL:0000839,7.55e-28,66;CL:0000557,2.60e-27,67;CL:0000766,7.50e-25,72;CL:0000763,1.28e-17,108;CL:0000049,1.28e-17,108;CL:0000134,3.23e-11,354;CL:0002320,9.94e-11,361;CL:0000542,9.51e-10,53;CL:0000051,9.51e-10,53;CL:0000219,5.08e-09,386;CL:0000838,1.04e-08,52;CL:0000945,2.68e-07,24;CL:0000826,2.68e-07,24;CL:0000048,5.70e-07,427 | |||
|ontology_enrichment_development_v019=CL:0002057;3.86e-30;42!CL:0000049;8.72e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!1.39e-07!51;DOID:0060083!1.39e-07!51;DOID:0060058!6.00e-07!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.15e-37!102;UBERON:0003061!1.15e-37!102;UBERON:0002193!1.81e-33!112;UBERON:0001474!3.67e-26!86;UBERON:0004765!1.63e-25!101;UBERON:0001434!1.63e-25!101;UBERON:0002371!6.10e-24!80;UBERON:0002384!1.83e-20!375;UBERON:0002405!3.11e-18!115;UBERON:0000178!1.53e-09!15;UBERON:0000179!1.53e-09!15;UBERON:0000463!1.53e-09!15;UBERON:0002204!4.59e-09!167;UBERON:0003081!1.05e-07!216;UBERON:0004177!3.09e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;8.59e-08;32!UBERON:0000178;5.34e-07;15!UBERON:0000179;5.34e-07;15!UBERON:0000463;5.34e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.07e-35,98;UBERON:0003061,2.07e-35,98;UBERON:0002193,6.43e-33,108;UBERON:0001474,7.26e-30,82;UBERON:0002405,1.13e-26,93;UBERON:0002371,1.38e-26,76;UBERON:0004765,2.29e-26,90;UBERON:0001434,8.16e-26,100;UBERON:0002204,1.36e-11,167;UBERON:0003081,1.78e-11,203;UBERON:0002384,2.69e-11,371;UBERON:0000178,4.40e-07,15;UBERON:0000179,4.40e-07,15;UBERON:0000463,4.40e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,2.90370941842215,4.18713006194723,4.01424984699764,0,0.383829398097213,0.77408061658038,0,0,0,0.0774672005803016,0.284338464974843,0,0,0.200544447470142,0.434021741431704,0.447830948479849,0.32389366601898,0,3.48955773070955,6.80176698639857,5.82201746850759,2.78914844286822,7.81218987241469,4.95530193432166,1.7261543539329,4.86705342405291,1.18241114944293,1.37898272294647,2.5819387343353,4.06279459783025,5.08254316765033,7.36846605156184,4.94391665779186,3.36692281607993,2.24650318953266,3.19668562899521,5.27762080298746,3.78980949481101,2.98357325372886,1.45104619314292,1.70215567407342,1.24564449799115,2.00998932205395,3.65038042894141,1.73751075764093,0.605399502633369,0.368277635987565,0.632924774881769,0.211255286311942,0,0.419317291016752,0,0.150176892841506,0,0.285012743741249,0.19891667719909,0.182664153764634,0,0.546138611262131,0,0.426730222566507,0.400395987036012,1.14950487990897,0,0.954053754535364,0,1.17447437874188,0.382273228125229,0,0.560508562981536,0,2.9506465517075,0.786021525498329,0.616804496998528,1.33749196312542,0.32592226663359,0.946895611469467,0,0.779873198196215,0,0,0,0.384273959177026,0.390178042679635,2.79544437826249,2.21080014228679,2.31842468588042,4.59688345802387,1.33770414044857,2.09071047609954,1.47302145506836,0.383220493601921,0.34362744548263,0.506039384039006,1.59282707162048,0,0.950452044448374,0.602300476311091,0.76791966692651,1.24930726552346,0.947109008176067,0,1.41124720257313,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245668634623536,0.206651562351531,0,0.741800787835671,0,0,0,0.375355559615893,0.554128230968366,1.31693286264251,0.612975591598039,1.05166641234618,0,0.89694817844431,0.427114777637135,0,0,0,0.515281080091258,0.37223371266318,0,0,0,0,0,0,0,0.508681776931463,0,0.272746120590835,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,1.3321108950805,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,1.2329365839288,0.394061520403854,0,0.77005821767849,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0.902838299183157,0,0,0.664225598535437,0.921845842708516,0,0,0,1.44737618286021,1.72571360654893,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,3.02179233900533,2.31026599777646,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,1.70894156152249,0.238231775457789,1.23408681925858,0.648473311192717,0,1.58625035258854,0,0,0,2.22963810150862,0,3.48595032407229,0.159426272728822,0.59873811429845,0.191505370132367,1.90506224451495,0,0,0,0,0,0.846458889008016,0.963528450622197,0.605399121573143,2.55507742614196,0.343505344755765,0,0.671028323677248,1.00109485027145,0,0.278406173895242,0,0,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0,0,0,0,0.398495976502139,3.31540698637377,0,0,9.10827560411914,0,0,0,0,0.197286811273867,2.3948309234694,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0,1.18608451472249,0.494255755786011,0.417687798021821,0,0,0.234264445725339,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0.822251547880505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509991088181609,0.288950589901519,0,0,0,0,1.31443677139657,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,1.35477331305255,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0,0,0.213574825135389,0,0,0,2.56895121467328,0.487170393523584,0,0,0,0,0,0,0,0,0,0.573409195690071,0,0,0,0,0,0.570930667089935,1.88212655758537,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0.318593534327405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.664324201566815,1.4720885483026,0.327609848846413,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90691047733584,6.21323933454091,0.397832444232549,0,1.21023041222112,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,3.22655165156182,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.771741581079447,0,0,0,0,0,0,0,0,0.939839179798536,0.515663103788617,7.99529247399431,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0.581300188524055,1.30356900021302,0,0.0636471582781649,0,0,0,2.1552656964668,0.358611026963382,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.603821380773079,3.52625341533556 | |||
|short_description=p7@RUNX3 | |||
}} |
Latest revision as of 02:42, 17 September 2015
Short description: | p7@RUNX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RUNX3_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000479341, uc009vrl.1_5end |
EntrezGene: | RUNX3 |
HGNC: | 10473 |
UniProt: | O14814 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.07e-35 | 98 |
blood island | 2.07e-35 | 98 |
hemolymphoid system | 6.43e-33 | 108 |
bone element | 7.26e-30 | 82 |
immune system | 1.13e-26 | 93 |
bone marrow | 1.38e-26 | 76 |
skeletal element | 2.29e-26 | 90 |
skeletal system | 8.16e-26 | 100 |
musculoskeletal system | 1.36e-11 | 167 |
lateral plate mesoderm | 1.78e-11 | 203 |
connective tissue | 2.69e-11 | 371 |
blood | 4.40e-07 | 15 |
haemolymphatic fluid | 4.40e-07 | 15 |
organism substance | 4.40e-07 | 15 |