FFCP PHASE1:Hg19::chr1:55182238..55182265,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:55182238..55182265,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr1:55182238..55182265,+ | |||
|id=chr1:55182238..55182265,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.47e-37!42;CL:0000860!1.60e-34!45;CL:0002194!8.10e-24!63;CL:0000576!8.10e-24!63;CL:0000040!8.10e-24!63;CL:0000559!8.10e-24!63;CL:0002009!7.43e-23!65;CL:0000839!1.09e-20!70;CL:0000557!2.70e-20!71;CL:0000766!1.80e-18!76;CL:0000763!3.32e-11!112;CL:0000049!3.32e-11!112;CL:0002087!5.08e-11!119;CL:0002031!2.80e-10!124;CL:0000738!2.76e-08!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.81e-85;33!CL:0002057;6.81e-85;33!CL:0000473;3.92e-55;39!CL:0000234;3.92e-55;39!CL:0000576;8.66e-44;48!CL:0000766;1.45e-22;69!CL:0000319;5.84e-11;1!CL:0000763;1.19e-09;100!CL:0002087;4.70e-09;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.26e-70,42;CL:0002057,1.26e-70,42;CL:0000473,1.71e-61,48;CL:0000234,1.71e-61,48;CL:0002194,1.07e-48,59;CL:0000576,1.07e-48,59;CL:0000040,1.07e-48,59;CL:0000559,1.07e-48,59;CL:0002009,4.78e-47,61;CL:0000839,2.39e-43,66;CL:0000557,1.13e-42,67;CL:0000766,1.41e-39,72;CL:0000763,1.20e-25,108;CL:0000049,1.20e-25,108;CL:0002087,6.15e-24,115;CL:0002031,7.74e-23,120;CL:0000738,7.42e-20,136;CL:0002032,2.28e-16,161;CL:0000837,2.28e-16,161;CL:0000037,1.41e-15,168;CL:0000988,1.20e-14,177;CL:0000319,5.05e-11,1 | |||
|ontology_enrichment_development_v019=CL:0002057;6.34e-53;42!CL:0000049;1.92e-08;108 | |||
|ontology_enrichment_disease=DOID:2394!3.78e-10!14;DOID:120!4.80e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:3030;5.84e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,5.05e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.52e-17!80;UBERON:0001474!1.80e-15!86;UBERON:0004765!2.77e-13!101;UBERON:0001434!2.77e-13!101;UBERON:0002390!6.40e-12!102;UBERON:0003061!6.40e-12!102;UBERON:0002193!3.09e-10!112;UBERON:0002405!8.61e-10!115;UBERON:0002204!2.98e-09!167;UBERON:0002118!4.41e-08!5;UBERON:0004532!4.41e-08!5 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.18e-37,76;UBERON:0001474,1.69e-34,82;UBERON:0004765,3.08e-31,90;UBERON:0002405,3.70e-30,93;UBERON:0002390,1.67e-28,98;UBERON:0003061,1.67e-28,98;UBERON:0001434,6.92e-28,100;UBERON:0002193,1.20e-25,108;UBERON:0002204,1.10e-15,167;UBERON:0003081,2.01e-12,203;UBERON:0000926,5.06e-08,315;UBERON:0004120,5.06e-08,315;UBERON:0006603,5.06e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0.485168122375632,0.232429036905685,1.6446715520873,1.23882548358041,6.90461741573161,7.42866048934392,6.85798466676897,0,0.645484683583826,1.35426486594342,0.188242339542605,1.36453075028923,0,0.306083892370903,0.962787081228281,0,0.329851300186716,2.59302754908121,1.27867425159808,2.32167390902867,7.37600792098482,3.11411124497787,9.2962006144995,7.30076085788282,10.6422533905507,3.02699751316684,3.68277635987565,1.89877432464531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.10893846351899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0,0.326587360109409,1.19730191562487,0,0.340776043570843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0.285465333544967,0.235265819698172,0,0,0,0.233713309847224,0.554805861502613,0,0,0,0.457680136793847,0.151230923763239,0.15543720058278,0,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0.521745061811734,0,0,0.406870733204662,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0.226705925512272,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0.607719912354764,0,0,0,0,0,3.93236654005951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:55182238..55182265,+ | |||
}} |
Latest revision as of 09:15, 28 July 2015
Short description: | p@chr1:55182238..55182265, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:55182238..55182265, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.26e-70 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.26e-70 | 42 |
defensive cell | 1.71e-61 | 48 |
phagocyte | 1.71e-61 | 48 |
monopoietic cell | 1.07e-48 | 59 |
monocyte | 1.07e-48 | 59 |
monoblast | 1.07e-48 | 59 |
promonocyte | 1.07e-48 | 59 |
macrophage dendritic cell progenitor | 4.78e-47 | 61 |
myeloid lineage restricted progenitor cell | 2.39e-43 | 66 |
granulocyte monocyte progenitor cell | 1.13e-42 | 67 |
myeloid leukocyte | 1.41e-39 | 72 |
myeloid cell | 1.20e-25 | 108 |
common myeloid progenitor | 1.20e-25 | 108 |
nongranular leukocyte | 6.15e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 7.74e-23 | 120 |
leukocyte | 7.42e-20 | 136 |
hematopoietic oligopotent progenitor cell | 2.28e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.28e-16 | 161 |
hematopoietic stem cell | 1.41e-15 | 168 |
hematopoietic cell | 1.20e-14 | 177 |
mucus secreting cell | 5.05e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.18e-37 | 76 |
bone element | 1.69e-34 | 82 |
skeletal element | 3.08e-31 | 90 |
immune system | 3.70e-30 | 93 |
hematopoietic system | 1.67e-28 | 98 |
blood island | 1.67e-28 | 98 |
skeletal system | 6.92e-28 | 100 |
hemolymphoid system | 1.20e-25 | 108 |
musculoskeletal system | 1.10e-15 | 167 |
lateral plate mesoderm | 2.01e-12 | 203 |
mesoderm | 5.06e-08 | 315 |
mesoderm-derived structure | 5.06e-08 | 315 |
presumptive mesoderm | 5.06e-08 | 315 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 5.05e-11 | 1 |