FFCP PHASE1:Hg19::chr20:32031588..32031597,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6640 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11167 | |||
|TSSclassifier=strong | |||
|UniProt=Q13424 | |||
|association_with_transcript=100bp_to_ENST00000217381,NM_003098,uc002wzd.1,uc010zuf.1_5end | |||
|cluster_id=chr20:32031588..32031597,- | |||
|description=CAGE_peak_4_at_SNTA1_5end | |||
|id=chr20:32031588..32031597,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002577;2.59e-12;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002577,2.31e-12,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;9.07e-18;2!DOID:1287;1.44e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.07e-17,2;DOID:1287,1.57e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.23e-15!115;UBERON:0003075!1.79e-09!86;UBERON:0007284!1.79e-09!86;UBERON:0002346!4.48e-09!90;UBERON:0001049!5.37e-08!57;UBERON:0005068!5.37e-08!57;UBERON:0006241!5.37e-08!57;UBERON:0007135!5.37e-08!57;UBERON:0005743!1.35e-07!86;UBERON:0002616!2.80e-07!59;UBERON:0001017!2.89e-07!82;UBERON:0000073!4.74e-07!94;UBERON:0001016!4.74e-07!94;UBERON:0000955!4.89e-07!69;UBERON:0006238!4.89e-07!69;UBERON:0000153!9.39e-07!129;UBERON:0007811!9.39e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;5.05e-34;1!UBERON:0007195;5.05e-34;1!UBERON:0000026;5.05e-34;1!UBERON:0008784;5.05e-34;1!UBERON:0006058;5.05e-34;1!UBERON:0003663;5.05e-34;1!UBERON:0004256;5.05e-34;1!UBERON:0004708;5.05e-34;1!UBERON:0002101;5.05e-34;1!UBERON:0004709;5.05e-34;1!UBERON:0002529;5.05e-34;1!UBERON:0010538;5.05e-34;1!UBERON:0003661;5.05e-34;1!UBERON:0010890;5.05e-34;1!UBERON:0002471;5.05e-34;1!UBERON:0001383;5.05e-34;1!UBERON:0010758;5.05e-34;1!UBERON:0010707;5.05e-34;1!UBERON:0000978;5.05e-34;1!UBERON:0002103;5.05e-34;1!UBERON:0001665;5.05e-34;1!UBERON:0003823;5.05e-34;1!UBERON:0000154;5.05e-34;1!UBERON:0010709;5.05e-34;1!UBERON:0005090;9.07e-18;2!UBERON:0001630;9.07e-18;2!UBERON:0001987;1.44e-09;4!UBERON:0001134;3.01e-09;16!UBERON:0002036;3.01e-09;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,5.05e-34,1;UBERON:0001389,5.05e-34,1;UBERON:0000026,5.05e-34,1;UBERON:0008784,5.05e-34,1;UBERON:0006058,5.05e-34,1;UBERON:0003663,5.05e-34,1;UBERON:0004256,5.05e-34,1;UBERON:0004708,5.05e-34,1;UBERON:0002101,5.05e-34,1;UBERON:0004709,5.05e-34,1;UBERON:0002529,5.05e-34,1;UBERON:0010538,5.05e-34,1;UBERON:0003661,5.05e-34,1;UBERON:0010890,5.05e-34,1;UBERON:0002471,5.05e-34,1;UBERON:0001383,5.05e-34,1;UBERON:0004357,5.05e-34,1;UBERON:0004347,5.05e-34,1;UBERON:0005420,5.05e-34,1;UBERON:0005732,5.05e-34,1;UBERON:0010758,5.05e-34,1;UBERON:0010707,5.05e-34,1;UBERON:0000978,5.05e-34,1;UBERON:0002103,5.05e-34,1;UBERON:0001665,5.05e-34,1;UBERON:0003823,5.05e-34,1;UBERON:0000154,5.05e-34,1;UBERON:0010709,5.05e-34,1;UBERON:0005733,5.05e-34,1;UBERON:0005730,5.05e-34,1;UBERON:0007195,9.85e-34,1;UBERON:0005090,9.07e-18,2;UBERON:0001630,9.07e-18,2;UBERON:0001987,1.32e-09,4;UBERON:0004340,1.32e-09,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0.369363174230364,0,0.626909442956176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0.163461903113459,0.454072282934794,0,0,0.624320153660641,0,0.149448680551801,0,0.161872944368132,0,0,0.122834317311768,0,0,0.247266929278557,0,0.718618141816238,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0.103052529238439,0,0,0,0.487185025805993,0,0,0,0.355009592516614,0,0,0.386521706326594,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0.8231480226628,0,0,0,0,0.441463099414651,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0.179060963239896,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0.0868836144680828,0.587403472388222,0.343143423810856,0,0,0,0,1.66435439510497,0,0,0,0.561320188866147,0,0,0.321707842287215,0,0,0,0.0821271560138091,0,0.348631135379878,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0,0,0.366277859273374,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0.66614393599564,0,0,0,0.36408156524854,0,0,0,0.296964680832639,0,0,0.140669416410513,0,0,0,0.398495976502139,0,0,0.20453736500431,0,0,0,0,0,0.197286811273867,0,1.11136990144637,0,0.278304294485554,0,0,0,0,0,0,0,0.689486746482929,0,0.347249989866585,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.0769502585037971,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0.451191321234361,0,0.167821586975843,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0.252746318513952,0,0.103688191397247,0,0.661983911750998,0.313932918407225,0,0,0.416024019039416,0.347119476670262,0,0,0,0.171986032471617,0.0967563312890851,0.219267951258557,0,0,0.0882561266915003,0.225980740780532,0,0,0.189932387867636,0.195551382734803,0,0,0,0,0.458146384663663,0,0,0.248505071130865,0,0,0.209205692624666,0,0,0,0,0,0.429765441419957,0,0.837847203816763,0.458320848023367,0,0.199679000498991,1.28767814440971,0.89268582976749,0.470284307407084,0,0,0.0787831823072236,0,0.0674035438541849,0.0984274815147488,0,0.795229689809303,0.544813624446302,0.160753148465019,0,0,0,0,0.425246896606173,0,0.0788057072991982,0.0524545881349981,0,0,0.383830394638891,0.714695326373367,0.662091970365432,0,0,0,0.326587360109409,0,0,0.170388021785422,0.453248366080503,0,0,0.387848869084652,0,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0.314108192500469,0,0.122026264901963,0.1251909307065,0,0.443716206147409,0.434674820589684,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0.457680136793847,0.151230923763239,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0.398095888698616,0.400027764663154,0.686791410365586,0.336749488765919,0,0.385239660814607,0.214441591374926,0,0.226705925512272,0,0,0,0,0,0.176689145945881,0.192914038270915,0,0,0,0,0,0,0,0,0.655219697692825,0.245772908753719,0,0,0,0,0,0,0,0,0.255788742607303,0,0,0,0.169732529954025,0,0,0,0.636008701306837,0,0,0,0.3062454773532,0.256916900385838,0,0.319267718114302,0.205116364240755,0,0.553258019713743,0.484426936895553,0,0,0.589848616738702,0,0,0,0,0.397832444232549,0.0752103283492573,0.40341013740704,0,0,0,0,0.270150338473579,0,0,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0,0,0,0.606965604236632,0,0,0,0.514464028312255,0.203909198930495,0.131545547125698,0,0,0.078493092850514,0.628462359664008,0,0,0.215927591218621,0.9555033757741,0.214429632529969,0.158013611732727,0,0,0,0,0.3414369541879,0,0,0,0,0,0,0,0,0.223710863595585,0,0,1.29485767437579,1.95059333026869,0,0,0.467878926924211,0,0,0,0.109940516745429,0.603851374266694,0,0.218559560503957,0.940634592723046,0.245148321753905,0,0.392616934229891,0.594092800654172,0,0.169927114687817,0,0.064457887973577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| |||
|short_description=p4@SNTA1 | |||
}} |
Latest revision as of 05:25, 25 September 2015
Short description: | p4@SNTA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNTA1_5end |
Coexpression cluster: | NA |
Association with transcript: | 100bp_to_ENST00000217381, NM_003098, uc002wzd.1, uc010zuf.1_5end |
EntrezGene: | SNTA1 |
HGNC: | 11167 |
UniProt: | Q13424 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
placental epithelial cell | 2.31e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 5.05e-34 | 1 |
soleus muscle | 5.05e-34 | 1 |
appendage | 5.05e-34 | 1 |
lower limb segment | 5.05e-34 | 1 |
multi-limb segment region | 5.05e-34 | 1 |
hindlimb muscle | 5.05e-34 | 1 |
hindlimb zeugopod muscle | 5.05e-34 | 1 |
paired limb/fin | 5.05e-34 | 1 |
limb | 5.05e-34 | 1 |
pelvic appendage | 5.05e-34 | 1 |
limb segment | 5.05e-34 | 1 |
paired limb/fin segment | 5.05e-34 | 1 |
limb muscle | 5.05e-34 | 1 |
pelvic complex muscle | 5.05e-34 | 1 |
zeugopod | 5.05e-34 | 1 |
muscle of leg | 5.05e-34 | 1 |
paired limb/fin bud | 5.05e-34 | 1 |
limb bud | 5.05e-34 | 1 |
pelvic appendage bud | 5.05e-34 | 1 |
limb/fin field | 5.05e-34 | 1 |
subdivision of organism along appendicular axis | 5.05e-34 | 1 |
appendage girdle complex | 5.05e-34 | 1 |
leg | 5.05e-34 | 1 |
hindlimb | 5.05e-34 | 1 |
triceps surae | 5.05e-34 | 1 |
hindlimb zeugopod | 5.05e-34 | 1 |
posterior region of body | 5.05e-34 | 1 |
pelvic complex | 5.05e-34 | 1 |
limb field | 5.05e-34 | 1 |
hindlimb/pelvic fin field | 5.05e-34 | 1 |
stroma of bone marrow | 9.85e-34 | 1 |
muscle structure | 9.07e-18 | 2 |
muscle organ | 9.07e-18 | 2 |
placenta | 1.32e-09 | 4 |
allantois | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.07e-17 | 2 |
cardiovascular system disease | 1.57e-09 | 4 |