FFCP PHASE1:Hg19::chr9:136242956..136242976,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:136242956..136242976,-
|short_description=p2@SURF4
|description=CAGE_peak_2_at_SURF4_5end
|association_with_transcript=0bp_to_ENST00000371989,ENST000004854...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6836 | |EntrezGene=6836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11476 | |HGNC=11476 | ||
|TSSclassifier=strong | |||
|UniProt=O15260,Q5T8U7 | |UniProt=O15260,Q5T8U7 | ||
|association_with_transcript=0bp_to_ENST00000371989,ENST00000485435,NM_033161,uc004cdj.2,uc011mdb.1,uc011mdc.1,uc011mdd.1_5end | |||
|cluster_id=chr9:136242956..136242976,- | |||
|coexpression_cluster_id=C562 | |||
|description=CAGE_peak_2_at_SURF4_5end | |||
|id=chr9:136242956..136242976,- | |||
|ontology_enrichment_celltype=CL:0000055!9.13e-32!180;CL:0000183!3.65e-21!59;CL:0000680!3.43e-20!57;CL:0000056!3.43e-20!57;CL:0000355!3.43e-20!57;CL:0000222!5.59e-20!119;CL:0000187!2.33e-19!54;CL:0000144!5.36e-19!625;CL:0000220!1.77e-18!246;CL:0002321!4.29e-18!248;CL:0002371!4.80e-18!591;CL:0000192!1.50e-17!42;CL:0000514!1.50e-17!42;CL:0000548!1.74e-17!679;CL:0000004!1.74e-17!679;CL:0000255!1.74e-17!679;CL:0000012!7.27e-17!682;CL:0000057!6.28e-16!75;CL:0000393!1.42e-15!60;CL:0000211!1.42e-15!60;CL:0000359!1.79e-13!32;CL:0000048!5.25e-07!430;CL:0000723!9.85e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.50e-12;32!CL:0000192;4.42e-12;43!CL:0000187;7.10e-11;55!CL:0000134;1.32e-08;55!CL:0000393;2.42e-08;61!CL:0000211;2.42e-08;61!CL:0000723;2.76e-07;61!CL:0000349;3.97e-07;19!CL:0000057;4.63e-07;73!CL:0000048;5.46e-07;58!CL:0002320;9.40e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.84e-20,121;CL:0000680,1.11e-19,58;CL:0000056,1.11e-19,58;CL:0000355,1.11e-19,58;CL:0000187,7.60e-19,55;CL:0002321,4.30e-18,250;CL:0000192,5.67e-17,43;CL:0000514,5.67e-17,43;CL:0000057,2.18e-16,76;CL:0000393,3.50e-15,61;CL:0000211,3.50e-15,61;CL:0000359,1.79e-13,32;CL:0000349,4.17e-07,19;CL:0000048,8.34e-07,427 | |||
|ontology_enrichment_development_v019=CL:0000514;4.42e-12;43!CL:0000355;5.16e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.07e-26!143;UBERON:0000490!8.29e-23!138;UBERON:0002100!6.78e-22!216;UBERON:0000914!2.62e-21!83;UBERON:0002329!2.62e-21!83;UBERON:0003077!2.62e-21!83;UBERON:0003059!2.62e-21!83;UBERON:0007282!2.62e-21!83;UBERON:0009618!2.62e-21!83;UBERON:0007285!2.62e-21!83;UBERON:0004290!6.63e-21!70;UBERON:0003914!3.31e-20!118;UBERON:0000486!6.94e-20!82;UBERON:0001134!1.06e-18!61;UBERON:0002036!1.06e-18!61;UBERON:0003082!1.06e-18!61;UBERON:0002385!1.44e-18!63;UBERON:0001015!1.44e-18!63;UBERON:0000383!1.44e-18!63;UBERON:0003104!5.25e-17!238;UBERON:0009142!5.25e-17!238;UBERON:0004872!8.45e-15!84;UBERON:0001637!7.45e-14!42;UBERON:0003509!7.45e-14!42;UBERON:0004572!7.45e-14!42;UBERON:0002049!6.60e-13!79;UBERON:0007798!6.60e-13!79;UBERON:0000926!1.08e-12!448;UBERON:0004120!1.08e-12!448;UBERON:0006603!1.08e-12!448;UBERON:0001981!1.60e-12!60;UBERON:0007500!1.60e-12!60;UBERON:0004537!1.60e-12!60;UBERON:0006965!1.60e-12!60;UBERON:0000475!3.53e-11!365;UBERON:0000055!4.45e-11!69;UBERON:0004573!1.16e-10!33;UBERON:0004571!1.16e-10!33;UBERON:0000481!1.67e-10!347;UBERON:0000119!6.45e-10!312;UBERON:0000483!1.58e-09!309;UBERON:0004535!1.98e-09!110;UBERON:0001009!5.01e-09!113;UBERON:0003102!2.85e-08!95;UBERON:0000468!4.33e-08!659;UBERON:0009569!5.00e-08!113;UBERON:0002107!3.95e-07!19;UBERON:0006925!3.95e-07!19;UBERON:0008836!3.95e-07!19;UBERON:0000478!4.37e-07!24;UBERON:0000467!7.07e-07!625;UBERON:0000480!8.53e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;3.87e-10;42!UBERON:0003509;3.87e-10;42!UBERON:0004572;3.87e-10;42!UBERON:0004573;1.55e-09;33!UBERON:0004571;1.55e-09;33!UBERON:0007500;3.16e-07;56!UBERON:0001981;3.16e-07;56!UBERON:0004537;3.16e-07;56!UBERON:0002107;3.75e-07;19!UBERON:0006925;3.75e-07;19!UBERON:0000478;4.13e-07;24 | |||
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| ||
|short_description=p2@SURF4 | |||
}} | }} |
Latest revision as of 07:00, 16 September 2015
Short description: | p2@SURF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SURF4_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | 0bp_to_ENST00000371989, ENST00000485435, NM_033161, uc004cdj.2, uc011mdb.1, uc011mdc.1, uc011mdd.1_5end |
EntrezGene: | SURF4 |
HGNC: | 11476 |
UniProt: | O15260Q5T8U7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.84e-20 | 121 |
muscle precursor cell | 1.11e-19 | 58 |
myoblast | 1.11e-19 | 58 |
multi-potent skeletal muscle stem cell | 1.11e-19 | 58 |
muscle cell | 7.60e-19 | 55 |
embryonic cell | 4.30e-18 | 250 |
smooth muscle cell | 5.67e-17 | 43 |
smooth muscle myoblast | 5.67e-17 | 43 |
fibroblast | 2.18e-16 | 76 |
electrically responsive cell | 3.50e-15 | 61 |
electrically active cell | 3.50e-15 | 61 |
vascular associated smooth muscle cell | 1.79e-13 | 32 |
extraembryonic cell | 4.17e-07 | 19 |
multi fate stem cell | 8.34e-07 | 427 |