FFCP PHASE1:Hg19::chr2:216236849..216236935,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2335 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3778 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=226bp_to_ENST00000485567_5end | |||
|cluster_id=chr2:216236849..216236935,- | |||
|coexpression_cluster_id=C79 | |||
|description=CAGE_peak_36_at_FN1_5end | |||
|id=chr2:216236849..216236935,- | |||
|ontology_enrichment_celltype=CL:0000055!1.79e-38!180;CL:0000057!7.91e-25!75;CL:0000680!4.75e-19!57;CL:0000056!4.75e-19!57;CL:0000355!4.75e-19!57;CL:0000187!1.25e-17!54;CL:0000183!1.50e-17!59;CL:0002371!2.31e-16!591;CL:0000393!1.67e-14!60;CL:0000211!1.67e-14!60;CL:0000144!5.36e-14!625;CL:0000222!5.21e-13!119;CL:0000192!5.23e-13!42;CL:0000514!5.23e-13!42;CL:0000220!6.73e-13!246;CL:0002321!2.13e-12!248;CL:0000359!2.71e-11!32;CL:0002620!2.80e-10!23;CL:0000048!4.98e-10!430;CL:0000723!1.40e-09!436;CL:0000034!7.83e-09!444;CL:0000548!8.98e-09!679;CL:0000004!8.98e-09!679;CL:0000255!8.98e-09!679;CL:0002494!9.57e-09!16;CL:0000012!2.84e-08!682;CL:0002334!1.71e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000134;2.03e-13;55!CL:0000723;3.71e-12;61!CL:0000187;1.27e-11;55!CL:0000359;1.55e-11;32!CL:0000048;3.45e-11;58!CL:0002620;4.14e-11;23!CL:0000057;1.04e-10;73!CL:0000192;1.32e-10;43!CL:0002494;4.77e-10;16!CL:0002320;2.06e-09;188!CL:0000393;5.06e-09;61!CL:0000211;5.06e-09;61!CL:0000349;9.16e-09;19!CL:0000034;1.05e-08;69!CL:0002334;1.80e-08;12!CL:0000499;2.79e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.03e-27,76;CL:0000680,5.55e-22,58;CL:0000056,5.55e-22,58;CL:0000355,5.55e-22,58;CL:0000048,9.18e-22,427;CL:0000723,2.42e-21,433;CL:0000187,2.62e-20,55;CL:0000034,1.03e-19,441;CL:0000393,2.05e-16,61;CL:0000211,2.05e-16,61;CL:0000192,7.28e-15,43;CL:0000514,7.28e-15,43;CL:0000359,2.30e-12,32;CL:0002620,3.76e-11,23;CL:0000222,3.01e-10,121;CL:0002494,4.73e-10,16;CL:0002320,3.73e-09,361;CL:0002321,5.23e-09,250;CL:0000349,1.28e-08,19;CL:0002334,1.42e-08,12;CL:0000134,9.69e-08,354;CL:0000499,2.52e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000355;1.57e-11;58!CL:0000514;1.32e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.79e-22!83;UBERON:0002329!8.79e-22!83;UBERON:0003077!8.79e-22!83;UBERON:0003059!8.79e-22!83;UBERON:0007282!8.79e-22!83;UBERON:0009618!8.79e-22!83;UBERON:0007285!8.79e-22!83;UBERON:0004290!3.71e-21!70;UBERON:0000486!1.84e-19!82;UBERON:0005256!4.54e-19!143;UBERON:0001134!9.79e-18!61;UBERON:0002036!9.79e-18!61;UBERON:0003082!9.79e-18!61;UBERON:0002385!1.42e-17!63;UBERON:0001015!1.42e-17!63;UBERON:0000383!1.42e-17!63;UBERON:0004872!1.07e-15!84;UBERON:0002049!1.11e-14!79;UBERON:0007798!1.11e-14!79;UBERON:0000490!1.87e-14!138;UBERON:0003914!4.14e-14!118;UBERON:0002100!8.57e-13!216;UBERON:0004535!1.07e-12!110;UBERON:0001637!1.46e-12!42;UBERON:0003509!1.46e-12!42;UBERON:0004572!1.46e-12!42;UBERON:0001009!2.19e-12!113;UBERON:0000055!1.66e-11!69;UBERON:0001981!5.43e-11!60;UBERON:0007500!5.43e-11!60;UBERON:0004537!5.43e-11!60;UBERON:0006965!5.43e-11!60;UBERON:0002199!2.55e-10!45;UBERON:0002416!2.55e-10!45;UBERON:0002097!6.75e-10!40;UBERON:0003102!8.87e-10!95;UBERON:0004573!9.18e-10!33;UBERON:0004571!9.18e-10!33;UBERON:0000119!9.42e-10!312;UBERON:0000483!2.07e-09!309;UBERON:0004923!5.26e-09!57;UBERON:0000475!1.03e-08!365;UBERON:0000468!1.11e-08!659;UBERON:0000948!1.52e-08!24;UBERON:0005498!1.52e-08!24;UBERON:0004140!1.52e-08!24;UBERON:0009881!1.52e-08!24;UBERON:0004141!1.52e-08!24;UBERON:0003084!1.52e-08!24;UBERON:0007005!1.52e-08!24;UBERON:0004139!1.52e-08!24;UBERON:0004291!1.52e-08!24;UBERON:0003104!6.09e-08!238;UBERON:0009142!6.09e-08!238;UBERON:0007100!1.04e-07!27;UBERON:0005631!7.18e-07!14;UBERON:0000158!7.18e-07!14;UBERON:0000947!7.47e-07!21;UBERON:0010191!7.47e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;6.51e-09;198!UBERON:0001637;7.98e-09;42!UBERON:0003509;7.98e-09;42!UBERON:0004572;7.98e-09;42!UBERON:0002385;1.29e-08;31!UBERON:0001015;1.29e-08;31!UBERON:0000383;1.29e-08;31!UBERON:0004573;1.63e-08;33!UBERON:0004571;1.63e-08;33!UBERON:0002097;1.96e-08;41!UBERON:0000478;2.01e-07;24!UBERON:0002199;2.51e-07;46!UBERON:0002416;2.51e-07;46!UBERON:0000948;3.33e-07;22!UBERON:0004923;5.32e-07;55!UBERON:0005631;8.09e-07;10!UBERON:0000158;8.09e-07;10!UBERON:0000947;8.31e-07;21!UBERON:0010191;8.31e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.25e-24,73;UBERON:0002329,3.37e-24,71;UBERON:0003059,3.37e-24,71;UBERON:0007282,3.37e-24,71;UBERON:0004290,3.37e-24,71;UBERON:0009618,3.37e-24,71;UBERON:0003077,1.62e-23,72;UBERON:0007285,1.62e-23,72;UBERON:0007503,4.63e-23,78;UBERON:0000486,2.30e-21,83;UBERON:0005256,9.72e-21,122;UBERON:0001134,3.58e-20,62;UBERON:0002036,3.58e-20,62;UBERON:0003082,3.58e-20,62;UBERON:0002385,1.42e-19,64;UBERON:0001015,1.42e-19,64;UBERON:0000383,1.42e-19,64;UBERON:0003104,6.75e-18,160;UBERON:0009142,6.75e-18,160;UBERON:0000490,9.17e-15,148;UBERON:0004872,8.33e-13,83;UBERON:0001637,2.11e-12,42;UBERON:0003509,2.11e-12,42;UBERON:0004572,2.11e-12,42;UBERON:0000926,2.33e-11,315;UBERON:0004120,2.33e-11,315;UBERON:0006603,2.33e-11,315;UBERON:0002049,7.00e-11,78;UBERON:0007798,7.00e-11,78;UBERON:0002199,7.99e-11,46;UBERON:0002416,7.99e-11,46;UBERON:0002097,1.15e-10,41;UBERON:0004923,1.26e-10,66;UBERON:0004535,1.72e-10,109;UBERON:0003914,1.97e-10,117;UBERON:0002100,2.68e-10,199;UBERON:0001009,4.76e-10,112;UBERON:0004573,9.81e-10,33;UBERON:0004571,9.81e-10,33;UBERON:0002384,1.33e-09,371;UBERON:0003102,4.54e-09,99;UBERON:0000055,1.83e-08,68;UBERON:0000948,2.13e-08,24;UBERON:0005498,2.13e-08,24;UBERON:0004140,2.13e-08,24;UBERON:0009881,2.13e-08,24;UBERON:0004141,2.13e-08,24;UBERON:0003084,2.13e-08,24;UBERON:0007005,2.13e-08,24;UBERON:0004139,2.13e-08,24;UBERON:0004291,2.13e-08,24;UBERON:0007500,2.21e-08,59;UBERON:0001981,2.21e-08,59;UBERON:0004537,2.21e-08,59;UBERON:0006965,2.21e-08,59;UBERON:0000478,2.41e-07,24;UBERON:0007100,2.78e-07,27;UBERON:0005631,4.29e-07,14;UBERON:0000158,4.29e-07,14;UBERON:0000947,6.63e-07,21;UBERON:0010191,6.63e-07,21 | |||
|phase1_expression=10.7190243769628,15.4152377201508,8.73917305395021,25.0183245882826,7.59833860526389,34.0212024399144,0,3.15859936713415,0.783556884599516,0.491467873003018,1.39560233594486,6.11635841964482,10.5506791291381,3.46545788288131,7.95353701746998,11.4295274896802,6.62963980826375,4.38186054232424,3.90346239032406,0.61560529038394,1.22400414746552,1.25381888591235,1.14494394852423,0.684372125364421,0.753255837568817,0,0,0,0,0,0.619264493264304,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,156.036394440935,7.37770945674,5.11450247374121,2.53007406669196,7.01873074890245,4.05570253090306,120.088178004716,204.87328039741,0.945348171640679,4.87804674417641,2.3715392137144,0.130979075497713,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0.39752481473341,0.860234595106124,1.38856200643038,3.95715559346807,0.838998872419812,3.85165258716094,1.67195973229448,2.06733407335463,0.71153252537342,1.67360306382335,1.20848795132744,0,0.732186172644509,0,5.67099363517232,0.267899184852239,0.673588117878509,0.337834441449967,0,0.949265659568129,1.09921046358244,0,0,0,28.3274012466332,9.3706578631789,36.6773430852616,46.4675325613078,9.57604631935564,10.6528744027038,19.2148192313469,9.62003438826924,9.02512002659322,9.42974704487816,7.02886183387873,17.8601764621019,19.58998143232,0.70296429550139,6.86752169026705,4.56377457235559,8.51857479145266,2.3486899728753,3.72307772046703,2.24721290723598,2.65400422631361,1.84251475967652,1.96318984233954,3.56400857184616,7.91254173691382,1.82032272387605,2.87447256726495,2.02003336744879,1.12606667884768,0.554128230968366,2.63386572528503,9.80760946556863,5.40857012063748,7.25965972224135,13.8130019480424,7.901623386287,11.6562545637759,13.2040082277137,6.18315175430633,17.7771972631484,6.70020682793723,18.0590675498155,7.4052123922511,17.670364197088,6.07529331039176,7.92065678412178,12.0703261455649,4.03008392910561,2.54340888465731,4.44499962275583,2.72746120590835,0.860413786167011,0,0,0.580969714347592,0.10366105501537,0.504641701751257,0,9.38697193978896,12.8648187638577,8.28809528114883,15.7885095530873,16.6032280784005,0,0,0,0,0,0,0,0,0,0,0,5.3504621473082,4.41026134156626,3.80265104465493,8.84544495009863,5.90789906681404,0,1.47586126251736,1.3725424823882,1.31700342490351,2.24803506515239,0,0,1.62904152655162,1.03993478527958,0,0,6.57488687720601,0.866198686566443,2.77791307545966,2.28304982681518,0,0,0,0,0,0,3.19166043577833,0,4.20925056703387,1.16253575405585,4.60059214998253,0,0,0,0,0,0,0.381988425558278,0,3.4214489204541,1.02827492703324,0,0,1.45770409648969,2.1798003441664,1.3200891447771,6.46358578788889,10.7296933755565,17.751357803676,1.32969058292435,1.04007436911366,4.37252536245642,2.83698264046557,4.52917704327369,2.43062589218851,2.17048642156577,3.29296134712308,2.60588947434988,1.77695974371273,1.58390374586686,0.904318131178758,1.74306691720059,0.399891964728228,0,0,0,11.0227433526128,4.59447743336456,4.27910715122155,10.2794727733981,12.9450083206742,4.47652408099739,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,2.4538298343828,5.50187573165645,5.96783052139418,9.35868876888632,14.0958901149758,3.46945313074656,10.5427273493442,8.12554469264841,18.1926003244788,3.10419213877515,6.64225598535437,12.3527342922941,2.08520674723399,3.13281851940385,5.83343820478455,0,0,0,0.909382714338778,6.65741758041988,6.04780586659361,21.3372714724148,36.5239496425589,27.7853493488743,11.6606625822688,13.3043884757343,17.3722234835096,28.1994326245483,6.32259744590888,9.58833316690886,1.88892458831761,2.59627214591811,4.53220475993841,1.45031339509947,11.6293752775905,0.0920809889358963,1.7222167224691,2.73136752010076,3.40923478894503,0.451199612907412,0.462092022626489,0,0,0.422206515571503,0,0,3.23873874153209,3.08454505380579,0.812839312631559,2.00675909541941,0,0,0.447749509444357,0,0,0.256450125116389,1.64007322849853,0.325378394664303,0.721287081534056,0.0915694648183434,0.082509499920588,1.14853107599234,1.30012049207304,3.21367859688319,2.12675580242668,5.69979883324184,6.60065801322357,4.9621166094431,12.1384876701149,12.1814022887952,4.60223788046945,2.40386496246191,6.7766815298001,4.61256161676255,13.7821729494151,5.36136238534415,2.32422774648643,37.4626692728462,3.485186350803,4.31247012246524,4.7907542728532,3.47973196830029,5.93037501132544,1.5743737541619,7.07100901783368,7.2767267685307,3.24071329670502,1.02359116524534,5.99114583247489,8.27328444607436,3.92474320099615,3.59744915166629,1.92175920815238,2.23843564456804,2.22400729730648,11.0957224821106,2.94880919367287,1.95053495635836,0.974853958525138,3.16950440270266,1.36499911407986,3.39373036688911,18.0812986592388,4.41092274836899,1.99031692572366,4.38450885253763,6.94530641120025,5.24715801637306,7.71059432458275,2.478587984798,5.35221644811259,1.86434757865267,4.51945588660357,11.4134736474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| |||
|short_description=p36@FN1 | |||
}} |
Latest revision as of 01:57, 20 September 2015
Short description: | p36@FN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 226bp_to_ENST00000485567_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.03e-27 | 76 |
muscle precursor cell | 5.55e-22 | 58 |
myoblast | 5.55e-22 | 58 |
multi-potent skeletal muscle stem cell | 5.55e-22 | 58 |
multi fate stem cell | 9.18e-22 | 427 |
somatic stem cell | 2.42e-21 | 433 |
muscle cell | 2.62e-20 | 55 |
stem cell | 1.03e-19 | 441 |
electrically responsive cell | 2.05e-16 | 61 |
electrically active cell | 2.05e-16 | 61 |
smooth muscle cell | 7.28e-15 | 43 |
smooth muscle myoblast | 7.28e-15 | 43 |
vascular associated smooth muscle cell | 2.30e-12 | 32 |
skin fibroblast | 3.76e-11 | 23 |
mesodermal cell | 3.01e-10 | 121 |
cardiocyte | 4.73e-10 | 16 |
connective tissue cell | 3.73e-09 | 361 |
embryonic cell | 5.23e-09 | 250 |
extraembryonic cell | 1.28e-08 | 19 |
preadipocyte | 1.42e-08 | 12 |
mesenchymal cell | 9.69e-08 | 354 |
stromal cell | 2.52e-07 | 28 |