FFCP PHASE1:Hg19::chr3:142607876..142607887,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26577 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8739 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-12bp_to_ENST00000461818_5end | |||
|cluster_id=chr3:142607876..142607887,- | |||
|coexpression_cluster_id=C243 | |||
|description=CAGE_peak_7_at_PCOLCE2_5end | |||
|id=chr3:142607876..142607887,- | |||
|ontology_enrichment_celltype=CL:0000055!2.69e-09!180;CL:0000153!4.30e-08!9;CL:0000447!4.30e-08!9;CL:0000136!2.22e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000153;3.50e-20;9!CL:0000447;3.50e-20;9!CL:0000138;7.58e-16;6!CL:0000135;1.12e-12;3!CL:0000388;1.12e-12;3!CL:0000499;6.56e-12;28!CL:0000327;1.12e-11;15!CL:0000136;5.93e-10;13!CL:0002595;8.21e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,4.70e-20,9;CL:0000447,4.70e-20,9;CL:0000058,1.19e-15,6;CL:0000138,1.19e-15,6;CL:0000136,9.86e-15,15;CL:0000135,1.11e-12,3;CL:0000388,1.11e-12,3;CL:0000499,7.42e-12,28;CL:0000327,1.32e-11,15;CL:0002595,5.42e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.57e-09;4!UBERON:0007284;8.57e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;6.21e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.58e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007100!1.62e-09!27;UBERON:0000948!2.64e-07!24;UBERON:0005498!2.64e-07!24;UBERON:0004140!2.64e-07!24;UBERON:0009881!2.64e-07!24;UBERON:0004141!2.64e-07!24;UBERON:0003084!2.64e-07!24;UBERON:0007005!2.64e-07!24;UBERON:0004139!2.64e-07!24;UBERON:0004291!2.64e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.12e-12;3!UBERON:0000043;1.12e-12;3!UBERON:0007845;1.12e-12;3!UBERON:0004151;1.84e-12;3!UBERON:0003978;1.40e-11;3!UBERON:0000946;1.40e-11;3!UBERON:0002081;8.30e-09;2!UBERON:0002133;1.86e-08;2!UBERON:0007100;3.56e-08;25!UBERON:0003834;8.21e-07;5!UBERON:0001533;8.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,5.73e-13,7;UBERON:0007846,1.11e-12,3;UBERON:0000043,1.11e-12,3;UBERON:0007845,1.11e-12,3;UBERON:0004151,1.75e-12,3;UBERON:0003978,1.21e-11,3;UBERON:0009751,1.21e-11,3;UBERON:0000946,1.21e-11,3;UBERON:0002523,1.21e-11,3;UBERON:0005983,1.21e-11,3;UBERON:0002165,1.21e-11,3;UBERON:0002062,1.21e-11,3;UBERON:0007280,1.21e-11,3;UBERON:0007100,1.55e-09,27;UBERON:0002081,7.87e-09,2;UBERON:0010227,7.87e-09,2;UBERON:0002133,1.15e-08,2;UBERON:0003834,5.42e-07,5;UBERON:0001533,5.42e-07,5 | |||
|phase1_expression=0.726713517082227,1.71280419112787,0.986680828671798,0,0.446961094427288,0,0,0,1.04474251279935,0,0,0,0,0,0.331397375727916,0.672325146451775,0,0,0,0,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,2.1686349143074,1.00267582127178,2.89693037921647,4.7717156823066,28.2248224775529,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.51956613997496,0.794455084879313,2.58152958673932,0.709336764396714,0,0,0,0.311211035399766,0,0.163461903113459,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0.300091096084402,0.206105058476878,0.772921620136887,1.67505170698431,2.02531598689519,1.16924406193438,0,0.184099797284599,0.161646056818812,0,0.302256294682921,0,0,0,0,0.365921118388786,0,0.580969714347592,0,0.504641701751257,0.72995471815166,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.435758888184812,0.71181185733329,0.269662616320329,0.196221465125346,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0.239624855491583,0,1.42636905040718,2.02693829334611,0.61642896765115,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0,0,0,0,0,0,0,0,0,0.496215615637554,0.920771839728375,0.841980283299221,0.384417447767103,0,0.482561763430822,0,0.154209693802656,1.42049380250502,0.492762936082855,0,0.929683027679674,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,0,0.325378394664303,1.33953315142039,0.366277859273374,0.577566499444116,0,0,0,0,0.308097234229289,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,2.83331112147576,0.6970372701606,0.308033580176089,0.532306030317022,0,0,1.14499909393593,0,0,0,0,0,0.318203247925937,0,0,0,0,0.808729926293264,0,0.421258456238981,0,1.70599442741899,0,0,0,5.65040583101214,0,1.32687795048244,1.75380354101505,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0.354761064070598,9.92205885899021,2.96365403663912,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.245040215981032,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.140669416410513,0,0,0,2.98871982376605,0.276283915531148,0,0,0,0.311039587661807,0,0,0,1.38100767891707,0,1.11136990144637,0,0,0,0.260427761085233,0,1.44999915086959,0.682760689712998,0,0,0,0.874813840149763,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.846452843541768,0.113942055847001,0,0,0.325942115766024,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0.394584402849391,0,0,0.252746318513952,0.300646838828985,0.518440956986236,0,0,0.313932918407225,0,0,0,0,0.293977192243133,0.174118413160805,0,0.343972064943233,0,0.65780385377567,0.164230914106418,0.775912131907355,0,0.225980740780532,0,0.19871461170299,0,0,0.240476460754601,0,0,0,0,0,0,0.124252535565433,0,0.271808412147228,0.209205692624666,0,0,0,0,0,0.429765441419957,0,1.95497680890578,1.14580212005842,5.0251111720377,1.19807400299395,1.28767814440971,3.12440040418622,0.403100834920358,0.360299883542404,0,0,0,0,0,0,0,0.136203406111576,0.482259445395058,0.275078873194468,0.415440338029185,0,0,0,0,0.315222829196793,0.262272940674991,0,0.179287339332845,0,2.85878130549347,5.29673576292345,0,2.71499800876856,0,0.326587360109409,0,0.082092520749339,0.681552087141687,0,0.146552233678082,0,0,0,0.342173675768659,0,0.213574825135389,0,0.828478110694391,0,0,0,0,6.52821364043369,7.0193170326356,4.28883807468846,2.62298104567844,0,0,0,0,0,0,0,0.415045904808692,0.124980407962107,0.151649117541648,0.285465333544967,0,0,0.869526171664951,0.298509605773748,0.233713309847224,0,0,1.25783950876288,0.889811221596536,0.915360273587694,0.453692771289717,0.777186002913902,0.147855149989634,0,0,0,0.829412415681711,0.265841714557995,0,0,0,0,0,0,0,0,0,1.71697852591396,1.6837474438296,0,0.192619830407303,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0.303859956177382,0,0,0,0,0,1.2288645437686,0,0,0,0,0,0.736423801007363,0,0,0.127894371303652,0.323474434190045,0,0.109209638192014,0,0,0,0,1.27201740261367,0,0,0,0,0,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0.11796972334774,0,0,0,1.3807198521202,0.397832444232549,0.225630985047772,0.40341013740704,0,0,0.163771917510097,0,0.135075169236789,0,0,0.126831620387814,0,0,0.496211178389294,0,0,0,0,0.606965604236632,1.82129753081038,0.79832133146375,0,0.171488009437418,0,0,0,0,0.549451649953598,0,0.560544326627578,0,0,0.47775168788705,0.428859265059938,0.316027223465453,0,0,0,0.207216164163037,0,0.691259661814092,0.430227358820278,0,0,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| |||
|short_description=p7@PCOLCE2 | |||
}} |
Latest revision as of 04:59, 25 September 2015
Short description: | p7@PCOLCE2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PCOLCE2_5end |
Coexpression cluster: | C243_Chondrocyte_trachea_Synoviocyte_mesodermal_renal_Fibroblast_Ewing |
Association with transcript: | -12bp_to_ENST00000461818_5end |
EntrezGene: | PCOLCE2 |
HGNC: | 8739 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 4.70e-20 | 9 |
carbohydrate secreting cell | 4.70e-20 | 9 |
chondroblast | 1.19e-15 | 6 |
chondrocyte | 1.19e-15 | 6 |
fat cell | 9.86e-15 | 15 |
fibrocyte | 1.11e-12 | 3 |
tendon cell | 1.11e-12 | 3 |
stromal cell | 7.42e-12 | 28 |
extracellular matrix secreting cell | 1.32e-11 | 15 |
smooth muscle cell of the subclavian artery | 5.42e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
blood vessel layer | 5.73e-13 | 7 |
dense regular connective tissue | 1.11e-12 | 3 |
tendon | 1.11e-12 | 3 |
regular connective tissue | 1.11e-12 | 3 |
cardiac chamber | 1.75e-12 | 3 |
valve | 1.21e-11 | 3 |
cardiac mesenchyme | 1.21e-11 | 3 |
cardial valve | 1.21e-11 | 3 |
tunica intima | 1.21e-11 | 3 |
heart layer | 1.21e-11 | 3 |
endocardium | 1.21e-11 | 3 |
endocardial cushion | 1.21e-11 | 3 |
presumptive endocardium | 1.21e-11 | 3 |
primary circulatory organ | 1.55e-09 | 27 |
cardiac atrium | 7.87e-09 | 2 |
future cardiac atrium | 7.87e-09 | 2 |
atrioventricular valve | 1.15e-08 | 2 |
thoracic segment blood vessel | 5.42e-07 | 5 |
subclavian artery | 5.42e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.58e-08 | 2 |