FFCP PHASE1:Hg19::chr3:152264185..152264189,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr3:152264185..152264189,+ | |||
|description=CAGE_peak_at_chr3:152264185..152264189,+ | |||
|id=chr3:152264185..152264189,+ | |||
|ontology_enrichment_celltype=CL:0000838!1.42e-07!52;CL:0000542!2.63e-07!53;CL:0000051!2.63e-07!53;CL:0002087!3.54e-07!119;CL:0002031!5.87e-07!124;CL:0002032!7.73e-07!165;CL:0000837!7.73e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0002127;4.83e-18;1!CL:0000911;4.83e-18;1!CL:0000814;4.83e-18;1!CL:0002097;1.57e-09;2!CL:0000174;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,5.26e-18,1;CL:0000914,5.26e-18,1;CL:0000911,5.26e-18,1;CL:0000814,5.26e-18,1;CL:0002042,5.26e-18,1;CL:0002039,5.26e-18,1;CL:0002040,5.26e-18,1;CL:0002041,5.26e-18,1;CL:0000893,1.12e-09,2;CL:0002489,1.12e-09,2;CL:0000809,1.12e-09,2;CL:0000808,1.12e-09,2;CL:0000894,1.12e-09,2;CL:0000806,1.12e-09,2;CL:0000807,1.12e-09,2;CL:0000805,1.12e-09,2;CL:0002425,1.12e-09,2;CL:0002097,1.44e-09,2;CL:0000174,8.62e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002425;1.07e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3307;9.06e-10;2!DOID:4556;9.11e-07;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,9.46e-10,2;DOID:4556,7.70e-07,3 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;4.83e-18;1!UBERON:0000026;4.83e-18;1!UBERON:0008784;4.83e-18;1!UBERON:0006058;4.83e-18;1!UBERON:0003663;4.83e-18;1!UBERON:0004256;4.83e-18;1!UBERON:0004708;4.83e-18;1!UBERON:0002101;4.83e-18;1!UBERON:0004709;4.83e-18;1!UBERON:0002529;4.83e-18;1!UBERON:0010538;4.83e-18;1!UBERON:0003661;4.83e-18;1!UBERON:0010890;4.83e-18;1!UBERON:0002471;4.83e-18;1!UBERON:0001383;4.83e-18;1!UBERON:0010758;4.83e-18;1!UBERON:0010707;4.83e-18;1!UBERON:0000978;4.83e-18;1!UBERON:0002103;4.83e-18;1!UBERON:0001665;4.83e-18;1!UBERON:0003823;4.83e-18;1!UBERON:0000154;4.83e-18;1!UBERON:0010709;4.83e-18;1!UBERON:0005090;1.07e-09;2!UBERON:0001630;1.07e-09;2!UBERON:0002369;9.11e-07;3!UBERON:0001235;9.11e-07;3!UBERON:0006858;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.44e-18,1;UBERON:0001389,4.44e-18,1;UBERON:0000026,4.44e-18,1;UBERON:0008784,4.44e-18,1;UBERON:0006058,4.44e-18,1;UBERON:0003663,4.44e-18,1;UBERON:0004256,4.44e-18,1;UBERON:0004708,4.44e-18,1;UBERON:0002101,4.44e-18,1;UBERON:0004709,4.44e-18,1;UBERON:0002529,4.44e-18,1;UBERON:0010538,4.44e-18,1;UBERON:0003661,4.44e-18,1;UBERON:0010890,4.44e-18,1;UBERON:0002471,4.44e-18,1;UBERON:0001383,4.44e-18,1;UBERON:0004357,4.44e-18,1;UBERON:0004347,4.44e-18,1;UBERON:0005420,4.44e-18,1;UBERON:0005732,4.44e-18,1;UBERON:0010758,4.44e-18,1;UBERON:0010707,4.44e-18,1;UBERON:0000978,4.44e-18,1;UBERON:0002103,4.44e-18,1;UBERON:0001665,4.44e-18,1;UBERON:0003823,4.44e-18,1;UBERON:0000154,4.44e-18,1;UBERON:0010709,4.44e-18,1;UBERON:0005733,4.44e-18,1;UBERON:0005730,4.44e-18,1;UBERON:0005090,1.03e-09,2;UBERON:0001630,1.03e-09,2;UBERON:0002369,8.62e-07,3;UBERON:0001235,8.62e-07,3;UBERON:0006858,8.62e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.246301768349837,0.629686250509434,0,0,0,0,0,0,0,0.284338464974843,0,0,0,0.217010870715852,0,0,0,0.290796477559129,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.641858054152187,0,0,0,0,0.290209238628584,0,0,0,0,0.434377689410233,1.81619850790011,0,0.632924774881769,0,0,0,0.112328631146495,0.150176892841506,0.16072558669708,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0.294605907474837,0.664601683750863,0,0.128091319725675,0,0.164437904603676,0.276350017785848,0,0,0.535081656179426,0,0.113309342697566,0.383220493601921,0.34362744548263,0.253019692019503,0,0,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0.434473211648397,0,0.670700859703636,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0.324547393654683,0.174129737299267,0.398873881556595,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0,0.496971951695318,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0.179117045405697,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,2.24170287987055,0.591092280605782,0.215627574859517,0.128343036279748,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0,0,0,0,0,0.306923946576125,0,0,0.511707249066704,0,0,0,0,0.0821271560138091,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0,0,0.0890320356467374,0,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0.355709216742071,0,0,0,0.635020748171649,0,0,0,0,0,6.60237933426253,0,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0.270455678475983,0,0,0,0,0,0.111443384277478,0.568272293612826,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0.19924798825107,0,0,0,0.246169610922139,0.622079175323615,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0.291604613383254,0.173624994933292,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0.455768223388005,0,0,0,0,0,0,0,0.31396051279005,0,0,0,0,0.189753732724185,0.635746315921515,0,0,0.141353071433941,0.216388639742091,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0.182454789215666,0.586993856796269,0,0,4.83962864194656,0,0,0,0,0.664653872707185,0.330991955875499,0,0,0,0,0,0.881931576729399,0,0,0,0,0,0.164230914106418,0,0,0,0.274083849293502,0,0,0,0.561111741760736,0,0,0,0,0.171594997861965,1.1524383839052,0.372757606696298,0,0.67952103036807,1.15063130943567,0,0,0,0.273810757783986,0,0.429765441419957,0,0.279282401272254,0.229160424011684,0,0,0,0,0,0.360299883542404,1.16495949527454,0,0,0,0.295282444544246,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,1.90080605734932,0.35857467866569,0,0,0,0,0,0,0.326587360109409,1.19730191562487,0.328370082997356,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0,0.197611631897944,0.243585196761792,0,0,0,0.306345576763462,0,0,0,0,0.250381861413,0.573409195690071,0.110929051536852,0,0.276697269872462,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,1.71553273099941,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.194860308839388,0,0,0,0,0.211312123358627,0,0.213383459388282,0.344429959321631,0.567515953566836,0,0,0,0.383683113910955,0,0,0,0,0.212574920101683,0.123935764259002,0,0,0,0,0,0,0,0,0.319267718114302,0,0,0,0,0,0,0,0,0.115525666150338,0,0,0,0,0,0,0.261906694481422,0,0.295712172434091,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.230467975111559,0,0,0,0,0.556157009460346,0,0,0,0,0,0,0.0714765441766563,0,0.116241425368125,0.173858272302579,4.81026818838152,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599646935549574,0,0,0.0802413666891683,0,0,0.286679166302903,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,0.639701945702943,0,0.0645889098360061,0,0.112131862580613,0.190941474834495,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr3:152264185..152264189,+ | |||
}} |
Latest revision as of 17:12, 29 July 2015
Short description: | p@chr3:152264185..152264189, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:152264185..152264189, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 5.26e-18 | 1 |
immature NK T cell | 5.26e-18 | 1 |
effector T cell | 5.26e-18 | 1 |
mature NK T cell | 5.26e-18 | 1 |
immature NK T cell stage IV | 5.26e-18 | 1 |
immature NK T cell stage I | 5.26e-18 | 1 |
immature NK T cell stage II | 5.26e-18 | 1 |
immature NK T cell stage III | 5.26e-18 | 1 |
thymocyte | 1.12e-09 | 2 |
double negative thymocyte | 1.12e-09 | 2 |
double-positive, alpha-beta thymocyte | 1.12e-09 | 2 |
DN4 thymocyte | 1.12e-09 | 2 |
DN1 thymic pro-T cell | 1.12e-09 | 2 |
DN2 thymocyte | 1.12e-09 | 2 |
DN3 thymocyte | 1.12e-09 | 2 |
immature single positive thymocyte | 1.12e-09 | 2 |
early T lineage precursor | 1.12e-09 | 2 |
cortical cell of adrenal gland | 1.44e-09 | 2 |
steroid hormone secreting cell | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.44e-18 | 1 |
soleus muscle | 4.44e-18 | 1 |
appendage | 4.44e-18 | 1 |
lower limb segment | 4.44e-18 | 1 |
multi-limb segment region | 4.44e-18 | 1 |
hindlimb muscle | 4.44e-18 | 1 |
hindlimb zeugopod muscle | 4.44e-18 | 1 |
paired limb/fin | 4.44e-18 | 1 |
limb | 4.44e-18 | 1 |
pelvic appendage | 4.44e-18 | 1 |
limb segment | 4.44e-18 | 1 |
paired limb/fin segment | 4.44e-18 | 1 |
limb muscle | 4.44e-18 | 1 |
pelvic complex muscle | 4.44e-18 | 1 |
zeugopod | 4.44e-18 | 1 |
muscle of leg | 4.44e-18 | 1 |
paired limb/fin bud | 4.44e-18 | 1 |
limb bud | 4.44e-18 | 1 |
pelvic appendage bud | 4.44e-18 | 1 |
limb/fin field | 4.44e-18 | 1 |
subdivision of organism along appendicular axis | 4.44e-18 | 1 |
appendage girdle complex | 4.44e-18 | 1 |
leg | 4.44e-18 | 1 |
hindlimb | 4.44e-18 | 1 |
triceps surae | 4.44e-18 | 1 |
hindlimb zeugopod | 4.44e-18 | 1 |
posterior region of body | 4.44e-18 | 1 |
pelvic complex | 4.44e-18 | 1 |
limb field | 4.44e-18 | 1 |
hindlimb/pelvic fin field | 4.44e-18 | 1 |
muscle structure | 1.03e-09 | 2 |
muscle organ | 1.03e-09 | 2 |
adrenal gland | 8.62e-07 | 3 |
adrenal cortex | 8.62e-07 | 3 |
adrenal/interrenal gland | 8.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
teratoma | 9.46e-10 | 2 |
lung large cell carcinoma | 7.70e-07 | 3 |