FFCP PHASE1:Hg19::chrX:150884539..150884578,+: Difference between revisions
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(Created page with "{{FFCP
|id=chrX:150884539..150884578,+
|short_description=p2@FATE1
|description=CAGE_peak_2_at_FATE1_5end
|association_with_transcript=31bp_to_NM_033085,uc004fex.2_5end
|...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89885 | |EntrezGene=89885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24683 | |HGNC=24683 | ||
|TSSclassifier=strong | |||
|UniProt=Q969F0 | |UniProt=Q969F0 | ||
|association_with_transcript=31bp_to_NM_033085,uc004fex.2_5end | |||
|cluster_id=chrX:150884539..150884578,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_2_at_FATE1_5end | |||
|id=chrX:150884539..150884578,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.49e-14;10!UBERON:0005564;2.49e-14;10!UBERON:0005062;1.63e-09;4!UBERON:0007284;1.63e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-40!115;UBERON:0001950!1.94e-22!20;UBERON:0002619!3.00e-20!22;UBERON:0001869!3.15e-18!32;UBERON:0000956!1.34e-17!25;UBERON:0000203!1.34e-17!25;UBERON:0001893!5.35e-17!34;UBERON:0002780!1.08e-15!41;UBERON:0001890!1.08e-15!41;UBERON:0006240!1.08e-15!41;UBERON:0000200!1.81e-15!6;UBERON:0003080!3.04e-15!42;UBERON:0002791!5.07e-15!33;UBERON:0002020!1.65e-14!34;UBERON:0003528!1.65e-14!34;UBERON:0002346!3.23e-12!90;UBERON:0003075!1.38e-11!86;UBERON:0007284!1.38e-11!86;UBERON:0003056!4.85e-11!61;UBERON:0001049!2.11e-10!57;UBERON:0005068!2.11e-10!57;UBERON:0006241!2.11e-10!57;UBERON:0007135!2.11e-10!57;UBERON:0005743!4.66e-10!86;UBERON:0002616!6.07e-10!59;UBERON:0001017!1.97e-09!82;UBERON:0000955!3.34e-09!69;UBERON:0006238!3.34e-09!69;UBERON:0000153!7.70e-09!129;UBERON:0007811!7.70e-09!129;UBERON:0000073!1.01e-08!94;UBERON:0001016!1.01e-08!94;UBERON:0001870!1.44e-08!2;UBERON:0002360!1.01e-07!2;UBERON:0000094!1.01e-07!2;UBERON:0007645!1.01e-07!2;UBERON:0000481!1.23e-07!347;UBERON:0001872!2.58e-07!5;UBERON:0002021!4.86e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002146;8.34e-34;1!UBERON:0005623;8.34e-34;1!UBERON:0002702;1.17e-17;2!UBERON:0000473;1.22e-17;8!UBERON:0003135;4.00e-13;11!UBERON:0001870;3.06e-12;3!UBERON:0003978;3.06e-12;3!UBERON:0000946;3.06e-12;3!UBERON:0000991;2.44e-07;21!UBERON:0003101;4.79e-07;22!UBERON:0000079;4.79e-07;22!UBERON:0000200;9.23e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002146,9.85e-34,1;UBERON:0005623,9.85e-34,1;UBERON:0002702,1.07e-17,2;UBERON:0000473,1.22e-17,8;UBERON:0003135,4.00e-13,11;UBERON:0001870,2.89e-12,3;UBERON:0003978,3.24e-12,3;UBERON:0009751,3.24e-12,3;UBERON:0000946,3.24e-12,3;UBERON:0002523,3.24e-12,3;UBERON:0005983,3.24e-12,3;UBERON:0002165,3.24e-12,3;UBERON:0002062,3.24e-12,3;UBERON:0007280,3.24e-12,3;UBERON:0000991,2.44e-07,21;UBERON:0009196,2.44e-07,21;UBERON:0009117,2.44e-07,21;UBERON:0005564,2.44e-07,21;UBERON:0004176,4.79e-07,22;UBERON:0003101,4.79e-07,22;UBERON:0000079,4.79e-07,22;UBERON:0000200,8.97e-07,6 | |||
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| ||
|short_description=p2@FATE1 | |||
}} | }} |
Latest revision as of 22:37, 19 September 2015
Short description: | p2@FATE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FATE1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 31bp_to_NM_033085, uc004fex.2_5end |
EntrezGene: | FATE1 |
HGNC: | 24683 |
UniProt: | Q969F0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pulmonary valve | 9.85e-34 | 1 |
semi-lunar valve | 9.85e-34 | 1 |
middle frontal gyrus | 1.07e-17 | 2 |
testis | 1.22e-17 | 8 |
male reproductive organ | 4.00e-13 | 11 |
frontal cortex | 2.89e-12 | 3 |
valve | 3.24e-12 | 3 |
cardiac mesenchyme | 3.24e-12 | 3 |
cardial valve | 3.24e-12 | 3 |
tunica intima | 3.24e-12 | 3 |
heart layer | 3.24e-12 | 3 |
endocardium | 3.24e-12 | 3 |
endocardial cushion | 3.24e-12 | 3 |
presumptive endocardium | 3.24e-12 | 3 |
gonad | 2.44e-07 | 21 |
indifferent external genitalia | 2.44e-07 | 21 |
indifferent gonad | 2.44e-07 | 21 |
gonad primordium | 2.44e-07 | 21 |
external genitalia | 4.79e-07 | 22 |
male organism | 4.79e-07 | 22 |
male reproductive system | 4.79e-07 | 22 |
gyrus | 8.97e-07 | 6 |