FFCP PHASE1:Hg19::chr5:142780280..142780294,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2908 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7978 | |||
|TSSclassifier=strong | |||
|UniProt=B6ZGU6,F5ATB7,F5ATB8,F1D8N4 | |||
|association_with_transcript=109bp_to_AB307716,AB527290,EU446477,HQ450643,HQ450644,HQ692822_5end | |||
|cluster_id=chr5:142780280..142780294,- | |||
|coexpression_cluster_id=C4472 | |||
|description=CAGE_peak_16_at_NR3C1_5end | |||
|id=chr5:142780280..142780294,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.25e-11;24!CL:0002568;1.90e-07;1!CL:0000817;4.08e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.09e-11,24;CL:0000826,1.09e-11,24;CL:0002568,1.85e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.58e-07;1!DOID:0050177;1.58e-07;1!DOID:0050427;1.58e-07;1!DOID:3571;4.08e-07;1!DOID:2355;4.08e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.54e-07,1;DOID:0050177,1.54e-07,1;DOID:0050427,1.54e-07,1;DOID:2355,4.34e-07,1;DOID:3571,5.19e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;7.41e-10;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,6.10e-10,10;UBERON:0000358,6.10e-10,10;UBERON:0000307,6.10e-10,10;UBERON:0000091,6.10e-10,10;UBERON:0000087,6.10e-10,10;UBERON:0007010,6.10e-10,10;UBERON:0007806,6.10e-10,10;UBERON:0008780,6.10e-10,10;UBERON:0005728,6.10e-10,10 | |||
|phase1_expression=0.181678379270557,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,7.10644673455947,5.33653831424647,5.11620078538915,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0.0774672005803016,0,0,0,0,0.434021741431704,0,0,0,0.145398238779565,0,0,0.464858073811369,0,0,0,1.0246428261164,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0.329851300186716,0.398927315243264,0,0.580418477257168,0.56738522469114,0.622822248995575,0.502497330513487,0.521482918420201,0,0,1.10483290796269,0.949387162322653,0.211255286311942,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0.393419540227666,0.786021525498329,0.616804496998528,0,0,0,0,0.111410456885174,0,0,0.270803863765016,0.128091319725675,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,1.24930726552346,0,0,0.201606743224732,0.267440195783507,0,0,0,0.12786256184353,0,0.50133791063589,0.289693037921647,0.795285947051099,0.486634870302636,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0.26591592103773,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.662045904066094,0.286836620748814,0.354668382198357,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0.150238058906597,0.113432183160021,0,0.213557388818567,0.635795703478686,0.300091096084402,0.618315175430633,0,0.37223371266318,0.675105328965065,0.389748020644795,0.252433774244115,0.368199594569197,0.161646056818812,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0.237270619111097,0.404493924480493,0,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71470603091333,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0,0,0,0.197030760201927,0.431255149719035,0,0.254094624222463,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0.415941723061614,0.713715955188647,0,0.117141414992713,0,0,0,0,0,0,0,0,0.206768026122887,0,0.426910231213777,0,0,0,0.496215615637554,0.61384789315225,0.280660094433074,0,0,0.321707842287215,0,0.308419387605311,0.355123450626254,0.164254312027618,0,0.697262270759755,0,0,0.0920809889358963,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.290012154876366,0.154048617114644,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0,0.10115778085555,0.929691098594572,0.62962469366128,0,0,0,0,0,0,0,0,0,0,0,0,1.56989728039846,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,0,1.65409603063837,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.238231775457789,0.411362273086194,0,0,0,0,0,0,0,1.73123055571734,0.142283686696828,0,0,0,0,0,0,0.228234679033192,0,0,0,0.1605880751037,0.201799707191048,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0.307160702099232,0,0.140669416410513,0,0.16480387422676,0,0.19924798825107,0.276283915531148,0,0.20453736500431,8.73902118773593,0,0,0.179021174675609,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0.0874599999961957,0,0,0,0.236387681767936,0,0,0,0,0.120596438625408,1.52581736317083,0.331737779793674,0.591095237907095,0.438770794307945,0,0,0.0769502585037971,0.683652335082007,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77912677208373,2.22415090103705,3.44592433368003,0.202203398942031,0,0,0.182454789215666,0,0,0.394584402849391,0,0,0.126373159256976,0,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.52418000472609,0.859930162358083,0.483781656445426,0.584714536689484,0.492692742319255,0,0,0,1.09633539717401,0.397429223405979,0.379864775735272,1.36885967914362,0.320635281006135,0,0,0,0,0.343189995723929,1.00838358591705,0.372757606696298,0.942776138467182,0,0,0.407992870545287,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0.223171457441873,0.0671834724867263,1.08089965062721,0,0,0.0824158583811665,0.202210631562555,0,1.1007533168552,0,0.136203406111576,0,0,0,0.2249738915515,0,0.364497339948148,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.566560457600628,0.146552233678082,0,0,0,0.513260513652988,0,0.106787412567695,0.314408610199332,0,0,0,0.852548188666271,0,0,0.5013797880454,0,0.655745261419609,0,0,0.366078794705889,0,0,0.221858103073705,0.18628920882415,0,0,0.151649117541648,0,0.235265819698172,0,0,0,0.467426619694449,0,0.568209015825267,0.251567901752575,0,0.228840068396924,0,1.08806040407946,0.295710299979268,0.318593534327405,0,0.310525913752519,0,1.06336685823198,0.521745061811734,0.150257608997218,0,0.406870733204662,0.181848659202559,0.429642228169954,0,0,0,1.03018711554838,1.01024846629776,0,0.192619830407303,0.428883182749851,0,0,1.15761237161917,1.71315693154527,0,0,0,0,0,0.168942440653073,0,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| |||
|short_description=p16@NR3C1 | |||
}} |
Latest revision as of 07:41, 25 September 2015
Short description: | p16@NR3C1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_NR3C1_5end |
Coexpression cluster: | C4472_renal_B_splenic_b_xeroderma_Mesenchymal_cord |
Association with transcript: | 109bp_to_AB307716, AB527290, EU446477, HQ450643, HQ450644, HQ692822_5end |
EntrezGene: | NR3C1 |
HGNC: | 7978 |
UniProt: | B6ZGU6F5ATB7F5ATB8F1D8N4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.09e-11 | 24 |
pro-B cell | 1.09e-11 | 24 |
mesenchymal stem cell of Wharton's jelly | 1.85e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 6.10e-10 | 10 |
blastocyst | 6.10e-10 | 10 |
blastula | 6.10e-10 | 10 |
bilaminar disc | 6.10e-10 | 10 |
inner cell mass | 6.10e-10 | 10 |
cleaving embryo | 6.10e-10 | 10 |
connecting stalk | 6.10e-10 | 10 |
inner cell mass derived epiblast | 6.10e-10 | 10 |
extraembryonic mesoderm | 6.10e-10 | 10 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.54e-07 | 1 |
monogenic disease | 1.54e-07 | 1 |
xeroderma pigmentosum | 1.54e-07 | 1 |
anemia | 4.34e-07 | 1 |
liver cancer | 5.19e-07 | 1 |