FFCP PHASE1:Hg19::chr5:96294145..96294180,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6656 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UIQ6 | |||
|association_with_transcript=0bp_to_ENST00000395770,NM_175920,uc003kmw.1_5end | |||
|cluster_id=chr5:96294145..96294180,+ | |||
|description=CAGE_peak_8_at_LNPEP_5end | |||
|id=chr5:96294145..96294180,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.17e-34!42;CL:0000860!6.98e-31!45;CL:0002194!2.16e-29!63;CL:0000576!2.16e-29!63;CL:0000040!2.16e-29!63;CL:0000559!2.16e-29!63;CL:0002087!6.96e-29!119;CL:0000766!7.88e-29!76;CL:0000037!1.68e-28!172;CL:0000566!1.68e-28!172;CL:0002009!3.85e-28!65;CL:0000738!5.37e-27!140;CL:0002032!5.53e-27!165;CL:0000837!5.53e-27!165;CL:0000839!7.09e-27!70;CL:0000763!2.40e-26!112;CL:0000049!2.40e-26!112;CL:0000988!6.91e-26!182;CL:0000557!8.13e-25!71;CL:0002031!1.59e-24!124;CL:0002393!3.10e-10!9;CL:0002397!3.10e-10!9;CL:0000134!1.41e-07!358;CL:0002320!4.07e-07!365;CL:0000875!4.49e-07!3;CL:0002396!4.49e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000875;1.50e-15;3!CL:0002396;1.50e-15;3!CL:0000576;4.60e-12;48!CL:0000473;2.56e-11;39!CL:0000234;2.56e-11;39!CL:0000766;3.58e-10;69!CL:0000860;9.14e-10;33!CL:0002057;9.14e-10;33!CL:0000840;9.79e-08;5!CL:0002393;1.29e-07;6!CL:0002397;1.29e-07;6!CL:0000763;8.94e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.24e-27,59;CL:0000576,2.24e-27,59;CL:0000040,2.24e-27,59;CL:0000559,2.24e-27,59;CL:0002009,2.42e-26,61;CL:0000473,4.90e-25,48;CL:0000234,4.90e-25,48;CL:0000766,4.54e-24,72;CL:0000839,4.94e-24,66;CL:0000557,1.30e-23,67;CL:0000860,2.57e-22,42;CL:0002057,2.57e-22,42;CL:0002393,5.82e-19,9;CL:0002397,5.82e-19,9;CL:0002087,2.50e-18,115;CL:0000763,5.56e-18,108;CL:0000049,5.56e-18,108;CL:0000738,3.72e-16,136;CL:0002031,9.25e-16,120;CL:0000875,1.03e-15,3;CL:0002396,1.03e-15,3;CL:0000037,1.27e-14,168;CL:0002032,3.47e-14,161;CL:0000837,3.47e-14,161;CL:0000988,1.40e-13,177;CL:0000840,9.03e-08,5;CL:0001029,9.03e-08,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-17;42!CL:0000049;5.66e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.70e-26!102;UBERON:0003061!3.70e-26!102;UBERON:0002193!7.21e-24!112;UBERON:0002371!8.83e-21!80;UBERON:0001474!1.43e-18!86;UBERON:0002405!5.02e-16!115;UBERON:0004765!3.05e-14!101;UBERON:0001434!3.05e-14!101;UBERON:0003081!6.87e-09!216;UBERON:0002384!5.74e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.59e-20,76;UBERON:0001474,1.63e-18,82;UBERON:0002390,2.65e-18,98;UBERON:0003061,2.65e-18,98;UBERON:0004765,1.74e-16,90;UBERON:0002193,3.65e-16,108;UBERON:0002405,8.18e-16,93;UBERON:0001434,2.10e-14,100;UBERON:0003081,2.89e-07,203;UBERON:0002204,6.27e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.246301768349837,0.236132343941038,1.57345710739562,0.383829398097213,0.309632246632152,0,0,0,2.94375362205146,3.2698923472107,0,0.553995408531877,0,0,0.223915474239924,0,0,0.290796477559129,1.13362783106643,0.242584061187816,0,0.411167888021826,0.309706370895104,0.28769239232215,3.07392847834921,2.83778675866302,0,0,1.35426486594342,0.188242339542605,0,0.449446968890169,0.306083892370903,0.641858054152187,0,2.63881040149373,1.59570926097305,3.83602275479425,0.870627715885752,0,0,0.251248665256743,2.08593167368081,3.04064382587163,0,0.368277635987565,0,3.16882929467913,1.91343869968539,1.46761051855863,0.112328631146495,0.600707571366025,0.48217676009124,1.99508920618874,6.56425034756997,7.12390199682072,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0.393010762749165,0.205601498999509,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,1.08321545506006,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,1.0478326039817,0,0,1.9472843619281,2.61194605948901,3.19099105245276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51006397708857,2.82399208348584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,5.97637867556789,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.55448424582997,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,1.96558024679421,0,0.313359791546046,5.01268954180134,0,0,0.403599414382095,0.425846237690326,0.343505344755765,0,0,0,0,0,0,0,0,0,0,3.22317994398167,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,1.10513566212459,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0.223171457441873,0.403100834920358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709251365692784,0.262272940674991,0,0,0,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,1.70859860108311,0.157204305099666,1.65695622138878,0,0,2.9230223611415,0,13.0564272808674,18.3003622636571,14.7045876846462,6.55745261419609,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,25.1027707560268,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0.563903507879121,0.902410431630081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.931120714437869,0,0.0636471582781649,0,0,0,0.606168477131288,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |||
|short_description=p8@LNPEP | |||
}} |
Latest revision as of 09:50, 19 September 2015
Short description: | p8@LNPEP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LNPEP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395770, NM_175920, uc003kmw.1_5end |
EntrezGene: | LNPEP |
HGNC: | 6656 |
UniProt: | Q9UIQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.24e-27 | 59 |
monocyte | 2.24e-27 | 59 |
monoblast | 2.24e-27 | 59 |
promonocyte | 2.24e-27 | 59 |
macrophage dendritic cell progenitor | 2.42e-26 | 61 |
defensive cell | 4.90e-25 | 48 |
phagocyte | 4.90e-25 | 48 |
myeloid leukocyte | 4.54e-24 | 72 |
myeloid lineage restricted progenitor cell | 4.94e-24 | 66 |
granulocyte monocyte progenitor cell | 1.30e-23 | 67 |
classical monocyte | 2.57e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.57e-22 | 42 |
intermediate monocyte | 5.82e-19 | 9 |
CD14-positive, CD16-positive monocyte | 5.82e-19 | 9 |
nongranular leukocyte | 2.50e-18 | 115 |
myeloid cell | 5.56e-18 | 108 |
common myeloid progenitor | 5.56e-18 | 108 |
leukocyte | 3.72e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 9.25e-16 | 120 |
non-classical monocyte | 1.03e-15 | 3 |
CD14-low, CD16-positive monocyte | 1.03e-15 | 3 |
hematopoietic stem cell | 1.27e-14 | 168 |
hematopoietic oligopotent progenitor cell | 3.47e-14 | 161 |
hematopoietic multipotent progenitor cell | 3.47e-14 | 161 |
hematopoietic cell | 1.40e-13 | 177 |
immature conventional dendritic cell | 9.03e-08 | 5 |
common dendritic progenitor | 9.03e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.59e-20 | 76 |
bone element | 1.63e-18 | 82 |
hematopoietic system | 2.65e-18 | 98 |
blood island | 2.65e-18 | 98 |
skeletal element | 1.74e-16 | 90 |
hemolymphoid system | 3.65e-16 | 108 |
immune system | 8.18e-16 | 93 |
skeletal system | 2.10e-14 | 100 |
lateral plate mesoderm | 2.89e-07 | 203 |
musculoskeletal system | 6.27e-07 | 167 |