FFCP PHASE1:Mm9::chr19:53867756..53867765,+: Difference between revisions
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{{FFCP|EntrezGene=73713|HGNC=|MCL_coexpression_id=19|UniProt=|association_with_transcript=-32bp_to_ENSMUST00000162910_5end|description=CAGE_peak_6_at_Rbm20_5end|id=chr19:53867756..53867765,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!1.25e-14!18;UBERON:0000948!1.25e-14!18;UBERON:0005498!1.25e-14!18;UBERON:0004140!1.25e-14!18;UBERON:0009881!1.25e-14!18;UBERON:0004141!1.25e-14!18;UBERON:0003084!1.25e-14!18;UBERON:0007005!1.25e-14!18;UBERON:0004139!1.25e-14!18;UBERON:0004291!1.25e-14!18;UBERON:0004535!2.51e-10!23;UBERON:0001009!2.51e-10!23;UBERON:0003103!3.74e-08!43|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.53e-35,18;UBERON:0000948,1.53e-35,18;UBERON:0005498,1.53e-35,18;UBERON:0004140,1.53e-35,18;UBERON:0009881,1.53e-35,18;UBERON:0004141,1.53e-35,18;UBERON:0003084,1.53e-35,18;UBERON:0007005,1.53e-35,18;UBERON:0004139,1.53e-35,18;UBERON:0004291,1.53e-35,18;UBERON:0004535,2.54e-27,23;UBERON:0001009,2.54e-27,23;UBERON:0003103,2.09e-18,43;UBERON:0004872,2.43e-18,33;UBERON:0003914,3.55e-12,47;UBERON:0003081,8.56e-09,87;UBERON:0010314,2.63e-08,92;UBERON:0005418,3.52e-07,5;UBERON:0002472,3.52e-07,5;UBERON:0008784,3.52e-07,5;UBERON:0006058,3.52e-07,5;UBERON:0004709,3.52e-07,5;UBERON:0002529,3.52e-07,5;UBERON:0010538,3.52e-07,5;UBERON:0005420,3.52e-07,5;UBERON:0010758,3.52e-07,5;UBERON:0000978,3.52e-07,5;UBERON:0002103,3.52e-07,5;UBERON:0000376,3.52e-07,5;UBERON:0000154,3.52e-07,5;UBERON:0010709,3.52e-07,5;UBERON:0005730,3.52e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,1.29413479957927,1.10420759230197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,2.10441855886474,0.130120442962704,0,0.180062129805349,0.30140963567143,0.476255494059295,0.12811372028485,0.187403449119458,1.55222022443409,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0.411564272815887,0,0,0,0,0.414251545071004,1.87620847984877,1.08037236876609,2.13070262026689,2.16440654922144,1.3884040159864,3.0229412817553,2.95100741539581,2.45207218971056,2.63295759861569,2.79084688934462,2.59420190546738,2.04679982395465,2.41505126820156,0.268412837520744,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.632365371242573,1.62371162777562,0.784993639206874,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0,0,0,1.76729649043061,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0.220528398054962,0.32977250588296,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94749498699775,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0,1.02860775715625,0,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,1.91288332068843,0.661774257358546,1.15933917810211|short_description=p6@Rbm20}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73713 | |||
|HGNC= | |||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-32bp_to_ENSMUST00000162910_5end | |||
|cluster_id=chr19:53867756..53867765,+ | |||
|description=CAGE_peak_6_at_Rbm20_5end | |||
|id=chr19:53867756..53867765,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!1.25e-14!18;UBERON:0000948!1.25e-14!18;UBERON:0005498!1.25e-14!18;UBERON:0004140!1.25e-14!18;UBERON:0009881!1.25e-14!18;UBERON:0004141!1.25e-14!18;UBERON:0003084!1.25e-14!18;UBERON:0007005!1.25e-14!18;UBERON:0004139!1.25e-14!18;UBERON:0004291!1.25e-14!18;UBERON:0004535!2.51e-10!23;UBERON:0001009!2.51e-10!23;UBERON:0003103!3.74e-08!43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.53e-35,18;UBERON:0000948,1.53e-35,18;UBERON:0005498,1.53e-35,18;UBERON:0004140,1.53e-35,18;UBERON:0009881,1.53e-35,18;UBERON:0004141,1.53e-35,18;UBERON:0003084,1.53e-35,18;UBERON:0007005,1.53e-35,18;UBERON:0004139,1.53e-35,18;UBERON:0004291,1.53e-35,18;UBERON:0004535,2.54e-27,23;UBERON:0001009,2.54e-27,23;UBERON:0003103,2.09e-18,43;UBERON:0004872,2.43e-18,33;UBERON:0003914,3.55e-12,47;UBERON:0003081,8.56e-09,87;UBERON:0010314,2.63e-08,92;UBERON:0005418,3.52e-07,5;UBERON:0002472,3.52e-07,5;UBERON:0008784,3.52e-07,5;UBERON:0006058,3.52e-07,5;UBERON:0004709,3.52e-07,5;UBERON:0002529,3.52e-07,5;UBERON:0010538,3.52e-07,5;UBERON:0005420,3.52e-07,5;UBERON:0010758,3.52e-07,5;UBERON:0000978,3.52e-07,5;UBERON:0002103,3.52e-07,5;UBERON:0000376,3.52e-07,5;UBERON:0000154,3.52e-07,5;UBERON:0010709,3.52e-07,5;UBERON:0005730,3.52e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,1.29413479957927,1.10420759230197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,2.10441855886474,0.130120442962704,0,0.180062129805349,0.30140963567143,0.476255494059295,0.12811372028485,0.187403449119458,1.55222022443409,0,0.189106080167819,0.175951124163949,0.43839146485515,0,0,0.411564272815887,0,0,0,0,0.414251545071004,1.87620847984877,1.08037236876609,2.13070262026689,2.16440654922144,1.3884040159864,3.0229412817553,2.95100741539581,2.45207218971056,2.63295759861569,2.79084688934462,2.59420190546738,2.04679982395465,2.41505126820156,0.268412837520744,0,0.102904612379284,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.632365371242573,1.62371162777562,0.784993639206874,0.246794327843601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0,0,0,0,0,0.275936746304732,0,0,0,1.76729649043061,0.315508219416257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0.220528398054962,0.32977250588296,0,0,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337912250981556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94749498699775,0,0.0897138566094757,0,0,0.187682475451182,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0.209613162627982,0.551530525350042,0.44449345560323,0.618105171716683,0.320919209591815,0.252697211763798,0,0,0,0.0640251524048693,0.114870937911227,0.476293691283074,0.231768651889711,0,0,0,1.02860775715625,0,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0,0.263069711437843,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0.233931608445408,0.214871054048298,1.91288332068843,0.661774257358546,1.15933917810211 | |||
|short_description=p6@Rbm20 | |||
}} |
Latest revision as of 23:16, 25 September 2015
Short description: | p6@Rbm20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Rbm20_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -32bp_to_ENSMUST00000162910_5end |
EntrezGene: | Rbm20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.53e-35 | 18 |
heart | 1.53e-35 | 18 |
primitive heart tube | 1.53e-35 | 18 |
primary heart field | 1.53e-35 | 18 |
anterior lateral plate mesoderm | 1.53e-35 | 18 |
heart tube | 1.53e-35 | 18 |
heart primordium | 1.53e-35 | 18 |
cardiac mesoderm | 1.53e-35 | 18 |
cardiogenic plate | 1.53e-35 | 18 |
heart rudiment | 1.53e-35 | 18 |
cardiovascular system | 2.54e-27 | 23 |
circulatory system | 2.54e-27 | 23 |
compound organ | 2.09e-18 | 43 |
splanchnic layer of lateral plate mesoderm | 2.43e-18 | 33 |
epithelial tube | 3.55e-12 | 47 |
lateral plate mesoderm | 8.56e-09 | 87 |
structure with developmental contribution from neural crest | 2.63e-08 | 92 |
hindlimb bud | 3.52e-07 | 5 |
stylopod | 3.52e-07 | 5 |
lower limb segment | 3.52e-07 | 5 |
multi-limb segment region | 3.52e-07 | 5 |
pelvic appendage | 3.52e-07 | 5 |
limb segment | 3.52e-07 | 5 |
paired limb/fin segment | 3.52e-07 | 5 |
pelvic appendage bud | 3.52e-07 | 5 |
subdivision of organism along appendicular axis | 3.52e-07 | 5 |
leg | 3.52e-07 | 5 |
hindlimb | 3.52e-07 | 5 |
hindlimb stylopod | 3.52e-07 | 5 |
posterior region of body | 3.52e-07 | 5 |
pelvic complex | 3.52e-07 | 5 |
hindlimb/pelvic fin field | 3.52e-07 | 5 |