FFCP PHASE1:Hg19::chr6:139691810..139691813,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:139691810..139691813,- | |||
|description=CAGE_peak_at_chr6:139691810..139691813,- | |||
|id=chr6:139691810..139691813,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;3.20e-08;1!CL:0002625;3.20e-08;1!CL:0002127;3.20e-08;1!CL:0000911;3.20e-08;1!CL:0000216;3.20e-08;1!CL:0000319;3.20e-08;1!CL:0000814;3.20e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,1.63e-08,1;CL:0000914,1.63e-08,1;CL:0000911,1.63e-08,1;CL:0000814,1.63e-08,1;CL:0002042,1.63e-08,1;CL:0002039,1.63e-08,1;CL:0002040,1.63e-08,1;CL:0002041,1.63e-08,1;CL:0000511,2.17e-08,1;CL:0002625,2.17e-08,1;CL:0000216,2.17e-08,1;CL:0000319,3.33e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.20e-13;5!UBERON:0005425;3.20e-08;1 | |||
|ontology_enrichment_disease=DOID:14566!3.23e-09!239;DOID:162!3.29e-09!235;DOID:0050687!4.34e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:171;2.98e-17;10!DOID:3111;3.20e-08;1!DOID:3030;3.20e-08;1!DOID:3112;3.20e-08;1!DOID:9119;3.20e-08;1!DOID:3603;3.20e-08;1!DOID:3095;9.77e-08;22!DOID:2994;9.77e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.96e-17,10;DOID:9119,2.02e-08,1;DOID:3111,2.89e-08,1;DOID:3603,2.89e-08,1;DOID:3030,3.33e-08,1;DOID:3112,3.57e-08,1;DOID:3095,8.15e-08,22;DOID:2994,8.15e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;4.09e-28;4!UBERON:0000923;4.09e-28;4!UBERON:0010316;4.09e-28;4!UBERON:0005291;4.09e-28;4!UBERON:0002050;1.50e-22;5!UBERON:0005423;1.50e-22;5!UBERON:0002046;3.20e-13;5!UBERON:0001136;3.20e-08;1!UBERON:0000941;3.20e-08;1!UBERON:0001343;3.20e-08;1!UBERON:0001785;3.20e-08;1!UBERON:0002464;3.20e-08;1!UBERON:0004904;3.20e-08;1!UBERON:0001021;3.20e-08;1!UBERON:0004910;3.20e-08;1!UBERON:0004813;3.20e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.73e-13,5;UBERON:0004117,3.73e-13,5;UBERON:0007689,3.73e-13,5;UBERON:0007123,3.73e-13,5;UBERON:0003091,3.73e-13,5;UBERON:0009722,2.04e-10,11;UBERON:0007690,2.04e-10,11;UBERON:0001136,2.17e-08,1;UBERON:0001343,2.17e-08,1;UBERON:0004910,2.17e-08,1;UBERON:0005154,2.17e-08,1;UBERON:0005295,2.17e-08,1;UBERON:0004813,2.17e-08,1;UBERON:0005297,2.17e-08,1;UBERON:0005294,2.17e-08,1;UBERON:0010141,2.17e-08,1;UBERON:0005891,2.17e-08,1;UBERON:0000941,4.11e-08,1;UBERON:0001785,4.11e-08,1;UBERON:0002464,4.11e-08,1;UBERON:0004904,4.11e-08,1;UBERON:0001021,4.11e-08,1;UBERON:0003902,4.11e-08,1;UBERON:0005425,4.11e-08,1 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0,0.487932798790507,0,0,0,0,0.273748850145768,0.125542639594803,0.0764134057479513,0,0,0.393364276848904,0,0,0,0,0,0.154934401160603,0.142169232487422,0.293600439334847,1.10799081706375,0.802177789880567,0.434021741431704,0,0.647787332037959,0,0.290796477559129,0,0,0,0,0,0,0,0,0.689491361473237,0.645484683583826,0,0,0,0,1.83650335422542,0.320929027076094,0,0,0,0,0,0,0.622822248995575,0,0,0.434377689410233,0,0,0,0,0.425208599930087,0,0.112328631146495,0,0.64290234678832,0.855038231223746,0.39783335439818,0,0,0,0,0.426730222566507,0,0,0,0,1.70763890732835,0,0,0,0,0.263384084775077,0,0.786021525498329,0.411202997999018,0,0,0,1.94826728407911,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0.534880391567015,0.144824403882799,0,0,0.255725123687061,0.722878304769133,0,0.289693037921647,0,0,0,0.221729397462564,0,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0,0.529636723252875,0,0,0,0,0,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0.277064115484183,0,0.30648779579902,0,0.226864366320042,0.538168907066586,0.213557388818567,1.48352330811693,0.900273288253207,0.412210116953756,0.515281080091258,0.18611685633159,1.35021065793013,0.0974370051611986,0,0.644349290496095,0.484938170456436,0.710019185033229,0.201504196455281,0.339121184620975,0.193260853163297,0,0,0.121973706129595,0,0.116193942869518,0.10366105501537,0,0,0,0.643240938192885,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0.288732895522148,0,0.190254152234598,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,1.79336230389644,0.197030760201927,1.07813787429759,0.513372145118994,0,1.30139853857622,0.773288812777695,0,0,0,0,0,0,0.500170521059677,0.271265023699736,1.03985430765404,0.535286966391485,0.630809660135739,0,0.300946099727719,0,0,0,0,0.260650843404249,0,0,0.620304078368662,0.215714200818617,0.106727557803444,0.303127571446259,0,0,0.744323423456331,0.920771839728375,0,0,0,0.160853921143607,0,0.308419387605311,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0.328014645699706,0.325378394664303,0.103041011647722,0.183138929636687,0,0,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0.359744915166629,0,0.117812402345686,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0,0,0,0,0,0.286822704408103,0.392996164052485,0,0.354761064070598,0.211107635297664,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0.213425530045242,0,0,0,0.211673582723883,0,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,0.605399121573143,1.27753871307098,0,0,0,0,0.19538809540204,0.278406173895242,0,0,1.6653598399891,0,0,0,0,0.334330152832435,0,0,0.593929361665277,0.307160702099232,0,0,2.22617410045812,0.659215496907038,1.47787785689595,0,0.276283915531148,0.503865495708552,0.306806047506464,0.123084805461069,0,0.359473404589307,0.179021174675609,0,0,0,0,0,0.0927680981618513,0,0,0.262379999988587,0,0,0,0,0.689486746482929,2.04123229368278,0,0,0,0,0.221158519862449,0,0,0.21787692703798,0.41827123283581,0.153900517007594,0.113942055847001,0.922255617552241,0.359030577639089,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0.189753732724185,0.317873157960757,0,0,0.141353071433941,0,0,0.0884575645033392,0,0.593042257361244,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.126373159256976,0,0.103688191397247,0,0,0.627865836814451,0,0,0,0,0.0979923974143777,0.0870592065804026,0,0,0,0.0730893170861856,0,0,0,0,0,0.397429223405979,0,0.195551382734803,0,0,0,0,0,0,0.864328787928898,0.621262677827163,0,0.407712618220842,0.104602846312333,0.713987523454252,0.577901179803038,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,1.16495949527454,0.157566364614447,0,0,0.295282444544246,0.0846733320657845,0,0,0.321506296930038,0.412618309791701,0,0,0,0,0,0.0788057072991982,0,0.316801009558219,0,0.959575986597226,0,0,0,0,0,0,0,0.246277562248017,3.23737241392301,0,0.146552233678082,0,0,0,0.171086837884329,0,0.106787412567695,0,0,0,0.197611631897944,0.243585196761792,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0.606596470166591,0,0.235265819698172,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0,0.521745061811734,0,0.380805212168795,0,0,0,0,0,2.00013882331577,0,0.673498977531838,0,0.57785949122191,0.428883182749851,0,0,0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| |||
|short_description=p@chr6:139691810..139691813,- | |||
}} |
Latest revision as of 20:14, 30 July 2015
Short description: | p@chr6:139691810..139691813, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:139691810..139691813, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 1.63e-08 | 1 |
immature NK T cell | 1.63e-08 | 1 |
effector T cell | 1.63e-08 | 1 |
mature NK T cell | 1.63e-08 | 1 |
immature NK T cell stage IV | 1.63e-08 | 1 |
immature NK T cell stage I | 1.63e-08 | 1 |
immature NK T cell stage II | 1.63e-08 | 1 |
immature NK T cell stage III | 1.63e-08 | 1 |
androgen binding protein secreting cell | 2.17e-08 | 1 |
seminiferous tubule epithelial cell | 2.17e-08 | 1 |
Sertoli cell | 2.17e-08 | 1 |
mucus secreting cell | 3.33e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.73e-13 | 5 |
pharyngeal pouch | 3.73e-13 | 5 |
thyroid diverticulum | 3.73e-13 | 5 |
pharyngeal pouch 2 | 3.73e-13 | 5 |
thyroid primordium | 3.73e-13 | 5 |
entire pharyngeal arch endoderm | 2.04e-10 | 11 |
early pharyngeal endoderm | 2.04e-10 | 11 |
mesothelium | 2.17e-08 | 1 |
seminiferous tubule of testis | 2.17e-08 | 1 |
epithelium of male gonad | 2.17e-08 | 1 |
epithelial cord | 2.17e-08 | 1 |
sex cord | 2.17e-08 | 1 |
seminiferous tubule epithelium | 2.17e-08 | 1 |
testis sex cord | 2.17e-08 | 1 |
genital ridge | 2.17e-08 | 1 |
primitive sex cord of indifferent gonad | 2.17e-08 | 1 |
coelomic epithelium | 2.17e-08 | 1 |
cranial nerve II | 4.11e-08 | 1 |
cranial nerve | 4.11e-08 | 1 |
nerve trunk | 4.11e-08 | 1 |
nerve connecting eye with brain | 4.11e-08 | 1 |
nerve | 4.11e-08 | 1 |
retinal neural layer | 4.11e-08 | 1 |
presumptive neural retina | 4.11e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.96e-17 | 10 |
acute myeloid leukemia | 2.02e-08 | 1 |
cystadenocarcinoma | 2.89e-08 | 1 |
mucinous cystadenocarcinoma | 2.89e-08 | 1 |
mucinous adenocarcinoma | 3.33e-08 | 1 |
papillary adenocarcinoma | 3.57e-08 | 1 |
germ cell and embryonal cancer | 8.15e-08 | 22 |
germ cell cancer | 8.15e-08 | 22 |