FFCP PHASE1:Hg19::chr6:2971494..2971544,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5269 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8950 | |||
|TSSclassifier=strong | |||
|UniProt=P35237 | |||
|association_with_transcript=0bp_to_ENST00000380539_5end | |||
|cluster_id=chr6:2971494..2971544,- | |||
|description=CAGE_peak_1_at_SERPINB6_5end | |||
|id=chr6:2971494..2971544,- | |||
|ontology_enrichment_celltype=CL:0000115!1.91e-09!35;CL:0000222!1.75e-08!119;CL:0000557!2.25e-08!71;CL:0002078!3.04e-08!44;CL:0000839!8.99e-08!70;CL:0002194!1.46e-07!63;CL:0000576!1.46e-07!63;CL:0000040!1.46e-07!63;CL:0000559!1.46e-07!63;CL:0000766!6.80e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.41e-08;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,6.33e-10,36;CL:0000222,6.41e-09,121;CL:0002078,1.12e-08,45;CL:0000557,3.98e-08,67;CL:0000473,1.25e-07,48;CL:0000234,1.25e-07,48;CL:0000839,1.60e-07,66;CL:0002194,2.54e-07,59;CL:0000576,2.54e-07,59;CL:0000040,2.54e-07,59;CL:0000559,2.54e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.09e-20!216;UBERON:0000926!5.89e-17!448;UBERON:0004120!5.89e-17!448;UBERON:0006603!5.89e-17!448;UBERON:0001009!1.71e-12!113;UBERON:0004535!1.98e-11!110;UBERON:0003914!5.05e-11!118;UBERON:0000055!3.45e-10!69;UBERON:0001981!4.51e-10!60;UBERON:0007500!4.51e-10!60;UBERON:0004537!4.51e-10!60;UBERON:0006965!4.51e-10!60;UBERON:0002204!9.97e-10!167;UBERON:0002049!2.23e-09!79;UBERON:0007798!2.23e-09!79;UBERON:0002193!7.96e-09!112;UBERON:0002371!1.51e-08!80;UBERON:0004872!1.56e-08!84;UBERON:0002390!8.28e-08!102;UBERON:0003061!8.28e-08!102;UBERON:0001474!2.91e-07!86;UBERON:0000467!3.12e-07!625;UBERON:0000480!5.71e-07!626;UBERON:0004765!8.57e-07!101;UBERON:0001434!8.57e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,6.41e-18,203;UBERON:0000926,1.16e-14,315;UBERON:0004120,1.16e-14,315;UBERON:0006603,1.16e-14,315;UBERON:0001009,3.18e-12,112;UBERON:0004535,3.61e-11,109;UBERON:0003914,6.59e-11,117;UBERON:0000055,6.46e-10,68;UBERON:0002204,7.20e-10,167;UBERON:0007500,8.66e-10,59;UBERON:0001981,8.66e-10,59;UBERON:0004537,8.66e-10,59;UBERON:0006965,8.66e-10,59;UBERON:0002049,4.07e-09,78;UBERON:0007798,4.07e-09,78;UBERON:0002193,1.49e-08,108;UBERON:0002371,2.72e-08,76;UBERON:0004872,2.74e-08,83;UBERON:0002390,1.52e-07,98;UBERON:0003061,1.52e-07,98;UBERON:0002405,3.61e-07,93;UBERON:0004765,3.92e-07,90;UBERON:0001474,5.31e-07,82;UBERON:0001434,7.89e-07,100 | |||
|phase1_expression=12.8991649282095,15.4152377201508,15.6459388546528,25.0183245882826,24.1358990990735,18.3191090061077,37.9949817252466,32.2177135447684,42.3120717683738,33.1740814277037,21.6318362071453,19.4412821195853,19.5187563889056,43.1944571830563,33.4711349485195,17.4804538077462,17.4781413126953,21.1789926212338,24.8845727383159,31.1496276934273,33.048111981569,15.0458266309482,27.4786547645814,22.0367824367344,25.8617837565294,0,0,0,36.976242023797,28.787204857291,29.7246956766866,31.2603216322835,23.4940616647035,32.9081069048441,0,2.70121541726101,58.4264874276346,63.7094719811659,44.3203228909013,46.4403263331923,45.2309257964647,48.9079435688659,52.2878402297399,27.7710636068969,22.6725566213286,27.4119989142232,25.799623096531,20.5583944010913,22.6085650753426,29.3446240168593,29.9708026639048,31.2156543452932,36.8877878388182,27.7558413941045,31.1480919166986,28.9893202895611,19.376336654107,27.1915416178552,28.4658019904939,28.8836124368484,27.4914964093588,31.0060222175513,30.7174032737313,25.5734850319616,29.8915515787442,26.0997203357924,21.1759564658495,31.6573318223497,29.2030434315313,32.7955155504726,27.848377121135,34.6180977828311,33.8614754561746,58.7289695947198,47.8359674921348,65.83281468963,51.8958275896807,59.1696957795535,50.7892853962773,38.7617331488098,27.8483348078726,43.4740685959829,26.3994366691984,29.4914850081551,28.4642961236338,16.2157484575273,15.2150475073685,18.3920780785435,16.5261218196216,11.4486450544244,18.7840279806118,24.6639619535794,9.17455747500549,47.5816782884493,44.2801764755413,47.935903429064,13.3762643677406,12.5763444079733,11.719285442972,3.51091640320424,33.5699934632598,29.8272117612882,60.3962858064525,8.0215528957325,4.71369451959739,5.31681347000691,3.24964636518019,0.896639238079726,3.12142434143708,10.5240258946353,14.64655094265,16.808578972633,21.0566919690126,21.1357254190873,8.36284190439814,5.21222976408804,9.96373283364995,11.6833331464094,13.4100436770337,22.6181444170109,18.8814201618361,24.7117531556577,31.169049649099,29.8208803989795,22.4875307794223,19.8892891716974,29.5606078891577,23.5879889572937,21.9300960542476,20.5650653513575,31.694892620815,39.5713507225145,34.1393040122226,36.8667935432258,35.0936537445123,37.3704018918925,22.2680065174308,36.4976152726977,23.728239108181,19.7339163741682,19.5871572095671,33.0722165631724,35.3366429643766,21.1347132387125,45.112087718001,35.6965961463498,35.2338595374993,4.76981248610684,8.57992366170192,8.91498003190956,40.1500062880744,36.1298529944572,35.061190662367,40.7021718185287,38.1744486951014,30.8132206972876,32.1852248466688,27.6505932311182,19.5671444477691,20.7526779914096,41.088590345133,79.8285711004438,46.3717909341522,36.7663080345869,42.1273812898515,30.8977059862916,40.1907577000844,28.9411504842138,30.6633274931766,37.9706263827252,42.8692080797153,10.5424333948851,3.87780264148325,23.5490788156969,24.3516256330706,25.4527328445805,11.9168262731897,16.0628507619336,21.2801029319014,26.3518472066884,35.2271685908026,22.2000793575444,18.0502400531864,30.9834545760283,21.5769712109766,22.09818443616,18.43762958336,38.8973576844102,43.7024107562449,50.2015202959115,43.0412199989187,21.3730787531652,23.3097039890109,22.612579879062,49.813617786194,34.0251058953597,40.6070320020758,24.9480600029231,31.8974338769338,45.5080680969013,38.0867615162606,29.6271560559157,29.0274966102957,30.7541168187443,26.7776348737311,38.6174622706765,24.3385655428687,25.4088090278447,17.0420153904419,31.8200509339665,20.9812582147966,19.8060123415706,26.3814474850404,15.2007918626921,32.9426835706914,12.658224918095,21.5335781406249,15.398460228891,21.1714766877288,21.3372795000832,17.3954700333141,23.8782472799507,24.5862858850207,14.8810856935739,16.3647672354501,12.9062067925052,4.39105342066543,7.81925633096763,10.1088730296481,9.74413917144482,9.84051318414951,4.37972830890996,28.1609158193669,16.0810234548221,27.6269842704961,26.0046039697908,32.4845766751314,45.3115044152602,45.0121122508532,53.2634376042495,45.3308227930139,45.1010449271281,48.6404769177748,45.1684882336551,48.0742589557098,52.7103605016555,64.957680006969,37.8652789269304,35.3953649745004,33.8120036186747,7.60530208930985,21.6221987669078,14.1789577603537,0,8.73217913656106,24.3626290623906,13.3895348198523,23.6043681841001,11.158715937691,18.3325121413889,19.8743066239298,66.555826257893,30.3095818253074,24.2294546397911,16.7894432757225,40.1338724775785,39.3537685690119,32.3432058798817,15.0138835612262,16.3112370798026,47.2736651687803,28.3145160818478,51.5750133141887,14.0600750980165,22.677587306846,19.4231883222069,24.0912426070662,31.6790992980219,19.935899316591,34.979089890612,78.7153000078241,35.6604358730128,39.6329871896644,34.7166691922545,11.8741062326356,20.2453865545887,32.8208852188132,35.9252136647681,12.9562640806188,6.00686115687835,25.724378936752,27.2478534959227,34.4408454378291,15.9144080231462,25.3372562885244,25.0359512096318,26.204385329236,19.6794206272804,29.1220823351825,40.12435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| |||
|short_description=p1@SERPINB6 | |||
}} |
Latest revision as of 14:32, 17 September 2015
Short description: | p1@SERPINB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SERPINB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000380539_5end |
EntrezGene: | SERPINB6 |
HGNC: | 8950 |
UniProt: | P35237 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 6.33e-10 | 36 |
mesodermal cell | 6.41e-09 | 121 |
meso-epithelial cell | 1.12e-08 | 45 |
granulocyte monocyte progenitor cell | 3.98e-08 | 67 |
defensive cell | 1.25e-07 | 48 |
phagocyte | 1.25e-07 | 48 |
myeloid lineage restricted progenitor cell | 1.60e-07 | 66 |
monopoietic cell | 2.54e-07 | 59 |
monocyte | 2.54e-07 | 59 |
monoblast | 2.54e-07 | 59 |
promonocyte | 2.54e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 6.41e-18 | 203 |
mesoderm | 1.16e-14 | 315 |
mesoderm-derived structure | 1.16e-14 | 315 |
presumptive mesoderm | 1.16e-14 | 315 |
circulatory system | 3.18e-12 | 112 |
cardiovascular system | 3.61e-11 | 109 |
epithelial tube | 6.59e-11 | 117 |
vessel | 6.46e-10 | 68 |
musculoskeletal system | 7.20e-10 | 167 |
epithelial tube open at both ends | 8.66e-10 | 59 |
blood vessel | 8.66e-10 | 59 |
blood vasculature | 8.66e-10 | 59 |
vascular cord | 8.66e-10 | 59 |
vasculature | 4.07e-09 | 78 |
vascular system | 4.07e-09 | 78 |
hemolymphoid system | 1.49e-08 | 108 |
bone marrow | 2.72e-08 | 76 |
splanchnic layer of lateral plate mesoderm | 2.74e-08 | 83 |
hematopoietic system | 1.52e-07 | 98 |
blood island | 1.52e-07 | 98 |
immune system | 3.61e-07 | 93 |
skeletal element | 3.92e-07 | 90 |
bone element | 5.31e-07 | 82 |
skeletal system | 7.89e-07 | 100 |