FFCP PHASE1:Hg19::chr9:120466568..120466595,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7099 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11850 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-14bp_to_ENST00000394487_5end | |||
|cluster_id=chr9:120466568..120466595,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_2_at_TLR4_5end | |||
|id=chr9:120466568..120466595,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.80e-25!76;CL:0002057!4.68e-22!42;CL:0000860!2.15e-20!45;CL:0002194!6.94e-20!63;CL:0000576!6.94e-20!63;CL:0000040!6.94e-20!63;CL:0000559!6.94e-20!63;CL:0000839!7.11e-20!70;CL:0000557!2.86e-19!71;CL:0002009!1.79e-18!65;CL:0000763!3.77e-15!112;CL:0000049!3.77e-15!112;CL:0002139!1.35e-08!24;CL:0000048!5.60e-08!430;CL:0000115!9.56e-08!35;CL:0000723!7.78e-07!436;CL:0000071!8.35e-07!18;CL:0002546!8.35e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.02e-21;33!CL:0002057;1.02e-21;33!CL:0000473;1.30e-19;39!CL:0000234;1.30e-19;39!CL:0000576;1.66e-15;48!CL:0000766;1.33e-13;69!CL:0002139;1.66e-09;24!CL:0000115;9.21e-08;36!CL:0000763;1.54e-07;100!CL:0000071;2.16e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,5.97e-28,72;CL:0000473,1.03e-25,48;CL:0000234,1.03e-25,48;CL:0000860,6.91e-24,42;CL:0002057,6.91e-24,42;CL:0002194,3.61e-22,59;CL:0000576,3.61e-22,59;CL:0000040,3.61e-22,59;CL:0000559,3.61e-22,59;CL:0000839,6.77e-22,66;CL:0000557,2.01e-21,67;CL:0002009,1.43e-20,61;CL:0000763,7.26e-18,108;CL:0000049,7.26e-18,108;CL:0002139,2.00e-09,24;CL:0000115,1.28e-08,36;CL:0000071,2.00e-07,18;CL:0002546,2.00e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;1.35e-17;42!CL:0002546;2.16e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!7.55e-29!216;UBERON:0002193!1.48e-22!112;UBERON:0001009!2.57e-21!113;UBERON:0004535!9.07e-21!110;UBERON:0002390!1.37e-20!102;UBERON:0003061!1.37e-20!102;UBERON:0002371!6.80e-19!80;UBERON:0001474!2.47e-16!86;UBERON:0002405!5.74e-16!115;UBERON:0002049!4.81e-14!79;UBERON:0007798!4.81e-14!79;UBERON:0002204!5.70e-13!167;UBERON:0004872!2.41e-12!84;UBERON:0004765!2.85e-12!101;UBERON:0001434!2.85e-12!101;UBERON:0000055!2.16e-11!69;UBERON:0001981!1.79e-10!60;UBERON:0007500!1.79e-10!60;UBERON:0004537!1.79e-10!60;UBERON:0006965!1.79e-10!60;UBERON:0000926!4.30e-10!448;UBERON:0004120!4.30e-10!448;UBERON:0006603!4.30e-10!448;UBERON:0000467!1.34e-09!625;UBERON:0000480!2.25e-09!626;UBERON:0000468!1.02e-08!659;UBERON:0000479!1.28e-07!787;UBERON:0001637!2.05e-07!42;UBERON:0003509!2.05e-07!42;UBERON:0004572!2.05e-07!42;UBERON:0007023!2.59e-07!115;UBERON:0007100!2.88e-07!27;UBERON:0004573!3.29e-07!33;UBERON:0004571!3.29e-07!33;UBERON:0003914!5.09e-07!118;UBERON:0000948!7.93e-07!24;UBERON:0005498!7.93e-07!24;UBERON:0004140!7.93e-07!24;UBERON:0009881!7.93e-07!24;UBERON:0004141!7.93e-07!24;UBERON:0003084!7.93e-07!24;UBERON:0007005!7.93e-07!24;UBERON:0004139!7.93e-07!24;UBERON:0004291!7.93e-07!24;UBERON:0001986!8.35e-07!18;UBERON:0004638!8.35e-07!18;UBERON:0004852!8.35e-07!18 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.43e-07;25!UBERON:0004638;2.16e-07;18!UBERON:0001986;2.16e-07;18!UBERON:0004852;2.16e-07;18!UBERON:0000948;3.33e-07;22!UBERON:0004535;3.87e-07;109 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.51e-33,203;UBERON:0002193,3.32e-25,108;UBERON:0002390,2.03e-23,98;UBERON:0003061,2.03e-23,98;UBERON:0000926,2.41e-23,315;UBERON:0004120,2.41e-23,315;UBERON:0006603,2.41e-23,315;UBERON:0001009,4.34e-22,112;UBERON:0004535,1.76e-21,109;UBERON:0002371,4.15e-21,76;UBERON:0002405,1.09e-20,93;UBERON:0001474,3.62e-18,82;UBERON:0004765,6.65e-17,90;UBERON:0001434,3.19e-14,100;UBERON:0002049,1.84e-13,78;UBERON:0007798,1.84e-13,78;UBERON:0004872,3.45e-13,83;UBERON:0002204,1.84e-11,167;UBERON:0000055,3.40e-11,68;UBERON:0007500,2.49e-10,59;UBERON:0001981,2.49e-10,59;UBERON:0004537,2.49e-10,59;UBERON:0006965,2.49e-10,59;UBERON:0007100,3.98e-08,27;UBERON:0000948,1.22e-07,24;UBERON:0005498,1.22e-07,24;UBERON:0004140,1.22e-07,24;UBERON:0009881,1.22e-07,24;UBERON:0004141,1.22e-07,24;UBERON:0003084,1.22e-07,24;UBERON:0007005,1.22e-07,24;UBERON:0004139,1.22e-07,24;UBERON:0004291,1.22e-07,24;UBERON:0004638,2.00e-07,18;UBERON:0001986,2.00e-07,18;UBERON:0004852,2.00e-07,18;UBERON:0004573,2.14e-07,33;UBERON:0004571,2.14e-07,33;UBERON:0001637,4.41e-07,42;UBERON:0003509,4.41e-07,42;UBERON:0004572,4.41e-07,42;UBERON:0003914,5.41e-07,117 | |||
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| |||
|short_description=p2@TLR4 | |||
}} |
Latest revision as of 18:49, 24 September 2015
Short description: | p2@TLR4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TLR4_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -14bp_to_ENST00000394487_5end |
EntrezGene: | TLR4 |
HGNC: | 11850 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 5.97e-28 | 72 |
defensive cell | 1.03e-25 | 48 |
phagocyte | 1.03e-25 | 48 |
classical monocyte | 6.91e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.91e-24 | 42 |
monopoietic cell | 3.61e-22 | 59 |
monocyte | 3.61e-22 | 59 |
monoblast | 3.61e-22 | 59 |
promonocyte | 3.61e-22 | 59 |
myeloid lineage restricted progenitor cell | 6.77e-22 | 66 |
granulocyte monocyte progenitor cell | 2.01e-21 | 67 |
macrophage dendritic cell progenitor | 1.43e-20 | 61 |
myeloid cell | 7.26e-18 | 108 |
common myeloid progenitor | 7.26e-18 | 108 |
endothelial cell of vascular tree | 2.00e-09 | 24 |
endothelial cell | 1.28e-08 | 36 |
blood vessel endothelial cell | 2.00e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.00e-07 | 18 |