FFCP PHASE1:Hg19::chr9:130980131..130980151,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1759 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2972 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-396bp_to_ENST00000441149_5end | |||
|cluster_id=chr9:130980131..130980151,+ | |||
|description=CAGE_peak_6_at_DNM1_5end | |||
|id=chr9:130980131..130980151,+ | |||
|ontology_enrichment_celltype=CL:0002194!9.07e-30!63;CL:0000576!9.07e-30!63;CL:0000040!9.07e-30!63;CL:0000559!9.07e-30!63;CL:0002009!1.59e-28!65;CL:0000766!4.18e-26!76;CL:0000839!9.93e-26!70;CL:0000557!3.22e-25!71;CL:0000763!1.60e-22!112;CL:0000049!1.60e-22!112;CL:0002057!3.02e-17!42;CL:0000860!1.16e-15!45;CL:0000738!1.87e-13!140;CL:0002087!9.78e-13!119;CL:0002032!4.57e-12!165;CL:0000837!4.57e-12!165;CL:0000037!7.69e-12!172;CL:0000566!7.69e-12!172;CL:0002031!5.74e-11!124;CL:0000990!1.56e-10!8;CL:0000988!1.57e-10!182;CL:0000451!2.25e-08!10;CL:0002619!1.02e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002619;9.52e-30;3!CL:0000840;3.79e-15;5!CL:0000990;2.78e-10;8!CL:0000451;1.67e-08;10!CL:0000576;1.65e-07;48!CL:0000235;3.35e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,4.17e-30,3;CL:0002194,3.49e-21,59;CL:0000576,3.49e-21,59;CL:0000040,3.49e-21,59;CL:0000559,3.49e-21,59;CL:0002009,1.93e-20,61;CL:0000839,8.90e-19,66;CL:0000557,1.79e-18,67;CL:0000766,4.43e-17,72;CL:0000840,2.99e-15,5;CL:0001029,2.99e-15,5;CL:0000763,4.74e-15,108;CL:0000049,4.74e-15,108;CL:0000990,2.38e-10,8;CL:0002087,4.83e-10,115;CL:0002031,1.51e-09,120;CL:0002032,2.24e-09,161;CL:0000837,2.24e-09,161;CL:0000037,6.83e-09,168;CL:0000451,1.47e-08,10;CL:0000988,2.52e-08,177;CL:0000738,3.30e-08,136;CL:0000235,3.46e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004874;9.04e-11;1!CL:0000049;3.25e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.05e-23!115;UBERON:0002371!3.36e-21!80;UBERON:0002390!6.78e-20!102;UBERON:0003061!6.78e-20!102;UBERON:0001474!5.33e-19!86;UBERON:0002193!3.78e-18!112;UBERON:0002405!3.32e-15!115;UBERON:0004765!1.12e-14!101;UBERON:0001434!1.12e-14!101;UBERON:0003081!1.54e-10!216;UBERON:0002204!1.20e-07!167;UBERON:0003978!4.15e-07!3;UBERON:0009751!4.15e-07!3;UBERON:0000946!4.15e-07!3;UBERON:0002523!4.15e-07!3;UBERON:0005983!4.15e-07!3;UBERON:0002165!4.15e-07!3;UBERON:0002062!4.15e-07!3;UBERON:0007280!4.15e-07!3;UBERON:0004151!4.87e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;9.04e-11;1!UBERON:0000989;9.04e-11;1!UBERON:0002134;9.04e-11;1!UBERON:0001301;9.04e-11;1!UBERON:0008811;9.04e-11;1!UBERON:0005208;9.04e-11;1!UBERON:0004145;9.04e-11;1!UBERON:0005946;9.04e-11;1!UBERON:0005965;9.04e-11;1!UBERON:0002078;9.04e-11;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.28e-16,76;UBERON:0001474,8.54e-15,82;UBERON:0004765,2.50e-13,90;UBERON:0002405,7.67e-13,93;UBERON:0002390,4.26e-12,98;UBERON:0003061,4.26e-12,98;UBERON:0001434,8.08e-12,100;UBERON:0002193,8.23e-11,108;UBERON:0000989,9.05e-11,1;UBERON:0008811,9.05e-11,1;UBERON:0006258,9.05e-11,1;UBERON:0005876,9.05e-11,1;UBERON:0004874,9.05e-11,1;UBERON:0007029,9.97e-11,1;UBERON:0002134,1.21e-10,1;UBERON:0005208,1.21e-10,1;UBERON:0005946,1.21e-10,1;UBERON:0005965,1.21e-10,1;UBERON:0002078,1.21e-10,1;UBERON:0001301,1.77e-10,1;UBERON:0003081,4.17e-08,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0.464448369948228,0,0,0,0,0,0,0,0.401088894940283,0.217010870715852,3.80656306207871,1.94336199611388,4.37878464978117,0.145398238779565,0,0.242584061187816,0,0,0.309706370895104,0,0.256160706529101,0,0,1.93645405075148,0,0.188242339542605,0.272906150057846,0,0.306083892370903,2.24650318953266,0,0.329851300186716,0.598390972864896,0.426224750532694,0.290209238628584,0,0,0.251248665256743,1.5644487552606,0.217188844705117,0,0,0,0.211255286311942,0.637812899895131,0,0.673971786878971,0.150176892841506,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,3.24547393654683,1.74129737299267,3.32394901297163,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.234004265139238,1.33768046059855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62310970137278,0,0,0,0,0,0,0.201799707191048,0,3.09154810280188,0.921722292925374,1.3420566473545,0.834245708559542,0.390776190804081,0,0,0,0,0,0,0.586032717087576,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.591860433821602,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0,0,0,0,0.134802265961354,0,0,0,0,0,0.394584402849391,0,0,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837847203816763,0.687481272035051,1.43574604915363,0.599037001496973,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.157363764404994,0,0,0,0.714695326373367,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0.265729680626726,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0.781078098613847,0,0.0634158101939068,0,0,1.48863353516788,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0.647428837187895,0.307988420568741,0,1.45713297917742,0,0,0,0,0,0,0.848915739187391,0.218559560503957,0,0.980593287015622,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0.103432995861895,1.27940389140589,0.476128862927481,0.0645889098360061,0.124149428591716,0,0,0,1.52401723527873,0.342233301085281,0.202056159043763,0.215166616178029,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p6@DNM1 | |||
}} |
Latest revision as of 18:25, 15 September 2015
Short description: | p6@DNM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DNM1_5end |
Coexpression cluster: | NA |
Association with transcript: | -396bp_to_ENST00000441149_5end |
EntrezGene: | DNM1 |
HGNC: | 2972 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 4.17e-30 | 3 |
monopoietic cell | 3.49e-21 | 59 |
monocyte | 3.49e-21 | 59 |
monoblast | 3.49e-21 | 59 |
promonocyte | 3.49e-21 | 59 |
macrophage dendritic cell progenitor | 1.93e-20 | 61 |
myeloid lineage restricted progenitor cell | 8.90e-19 | 66 |
granulocyte monocyte progenitor cell | 1.79e-18 | 67 |
myeloid leukocyte | 4.43e-17 | 72 |
immature conventional dendritic cell | 2.99e-15 | 5 |
common dendritic progenitor | 2.99e-15 | 5 |
myeloid cell | 4.74e-15 | 108 |
common myeloid progenitor | 4.74e-15 | 108 |
conventional dendritic cell | 2.38e-10 | 8 |
nongranular leukocyte | 4.83e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.51e-09 | 120 |
hematopoietic oligopotent progenitor cell | 2.24e-09 | 161 |
hematopoietic multipotent progenitor cell | 2.24e-09 | 161 |
hematopoietic stem cell | 6.83e-09 | 168 |
dendritic cell | 1.47e-08 | 10 |
hematopoietic cell | 2.52e-08 | 177 |
leukocyte | 3.30e-08 | 136 |
macrophage | 3.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.28e-16 | 76 |
bone element | 8.54e-15 | 82 |
skeletal element | 2.50e-13 | 90 |
immune system | 7.67e-13 | 93 |
hematopoietic system | 4.26e-12 | 98 |
blood island | 4.26e-12 | 98 |
skeletal system | 8.08e-12 | 100 |
hemolymphoid system | 8.23e-11 | 108 |
penis | 9.05e-11 | 1 |
intromittent organ | 9.05e-11 | 1 |
lateral plate mesenchyme | 9.05e-11 | 1 |
undifferentiated genital tubercle | 9.05e-11 | 1 |
somatopleure | 9.05e-11 | 1 |
surface | 9.97e-11 | 1 |
tricuspid valve | 1.21e-10 | 1 |
right atrium valve | 1.21e-10 | 1 |
outflow tract of atrium | 1.21e-10 | 1 |
outflow part of right atrium | 1.21e-10 | 1 |
right cardiac atrium | 1.21e-10 | 1 |
epididymis | 1.77e-10 | 1 |
lateral plate mesoderm | 4.17e-08 | 203 |