FFCP PHASE1:Mm9::chr11:103205965..103206033,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:103205965..103206033,-
|short_description=p1@Arhgap27
|description=CAGE_peak_1_at_Arhgap27_5end
|association_with_transcript=0bp_to_ENSMUST00000041385,NM_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=544817 | |EntrezGene=544817 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=A2AB59 | |UniProt=A2AB59 | ||
|association_with_transcript=0bp_to_ENSMUST00000041385,NM_133715,uc007lud.1_5end | |||
|cluster_id=chr11:103205965..103206033,- | |||
|description=CAGE_peak_1_at_Arhgap27_5end | |||
|id=chr11:103205965..103206033,- | |||
|ontology_enrichment_celltype=CL:0000988!3.63e-09!32;CL:0002032!3.63e-09!32;CL:0000037!3.63e-09!32;CL:0000566!3.63e-09!32;CL:0000837!3.63e-09!32;CL:0002031!2.62e-08!25;CL:0000838!3.35e-08!12;CL:0000738!9.80e-08!17;CL:0002087!9.80e-08!17;CL:0000084!1.22e-07!11;CL:0000827!1.22e-07!11;CL:0000542!7.51e-07!13;CL:0000051!7.51e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.47e-12,32;CL:0002032,5.47e-12,32;CL:0000037,5.47e-12,32;CL:0000837,5.47e-12,32;CL:0002031,1.12e-10,25;CL:0000838,1.82e-09,12;CL:0000738,2.55e-09,17;CL:0002087,2.55e-09,17;CL:0000084,8.50e-09,11;CL:0000827,8.50e-09,11;CL:0000542,2.70e-08,13;CL:0000051,2.70e-08,13;CL:0000791,1.60e-07,9;CL:0000789,1.60e-07,9;CL:0002420,1.60e-07,9;CL:0002419,1.60e-07,9;CL:0000790,1.60e-07,9;CL:0000624,7.13e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.82e-18!48;UBERON:0002390!5.58e-17!45;UBERON:0003061!5.58e-17!45;UBERON:0002405!4.45e-16!70;UBERON:0004177!9.46e-12!29;UBERON:0005057!1.71e-09!51;UBERON:0003408!2.93e-09!24;UBERON:0002370!6.96e-09!23;UBERON:0000974!6.96e-09!23;UBERON:0004807!6.96e-09!23;UBERON:0005058!6.96e-09!23;UBERON:0003351!6.96e-09!23;UBERON:0009113!6.96e-09!23;UBERON:0003295!6.96e-09!23;UBERON:0009722!6.96e-09!23;UBERON:0005562!6.96e-09!23;UBERON:0007690!6.96e-09!23;UBERON:0006562!6.60e-08!24;UBERON:0001557!6.60e-08!24;UBERON:0001042!6.60e-08!24;UBERON:0008814!6.60e-08!24;UBERON:0009145!6.60e-08!24;UBERON:0003081!2.12e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.53e-22,48;UBERON:0002405,2.53e-22,48;UBERON:0002390,1.53e-20,45;UBERON:0003061,1.53e-20,45;UBERON:0004177,6.44e-15,29;UBERON:0005057,6.44e-15,29;UBERON:0003408,6.68e-12,24;UBERON:0002370,1.88e-11,23;UBERON:0000974,1.88e-11,23;UBERON:0004807,1.88e-11,23;UBERON:0005058,1.88e-11,23;UBERON:0003351,1.88e-11,23;UBERON:0009113,1.88e-11,23;UBERON:0003295,1.88e-11,23;UBERON:0009722,1.88e-11,23;UBERON:0005562,1.88e-11,23;UBERON:0007690,1.88e-11,23;UBERON:0000077,5.20e-11,35;UBERON:0006562,1.44e-10,24;UBERON:0001557,1.44e-10,24;UBERON:0001042,1.44e-10,24;UBERON:0008814,1.44e-10,24;UBERON:0009145,1.44e-10,24;UBERON:0001004,6.82e-09,42;UBERON:0003081,1.33e-08,87;UBERON:0000065,1.72e-08,41;UBERON:0000072,2.34e-08,27;UBERON:0001041,9.25e-08,80;UBERON:0001474,5.65e-07,22;UBERON:0004765,5.65e-07,22;UBERON:0001434,5.65e-07,22 | |||
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| ||
|short_description=p1@Arhgap27 | |||
}} | }} |
Latest revision as of 19:11, 26 September 2015
Short description: | p1@Arhgap27 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Arhgap27_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000041385, NM_133715, uc007lud.1_5end |
EntrezGene: | Arhgap27 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.47e-12 | 32 |
hematopoietic oligopotent progenitor cell | 5.47e-12 | 32 |
hematopoietic stem cell | 5.47e-12 | 32 |
hematopoietic multipotent progenitor cell | 5.47e-12 | 32 |
hematopoietic lineage restricted progenitor cell | 1.12e-10 | 25 |
lymphoid lineage restricted progenitor cell | 1.82e-09 | 12 |
leukocyte | 2.55e-09 | 17 |
nongranular leukocyte | 2.55e-09 | 17 |
T cell | 8.50e-09 | 11 |
pro-T cell | 8.50e-09 | 11 |
lymphocyte | 2.70e-08 | 13 |
common lymphoid progenitor | 2.70e-08 | 13 |
mature alpha-beta T cell | 1.60e-07 | 9 |
alpha-beta T cell | 1.60e-07 | 9 |
immature T cell | 1.60e-07 | 9 |
mature T cell | 1.60e-07 | 9 |
immature alpha-beta T cell | 1.60e-07 | 9 |
CD4-positive, alpha-beta T cell | 7.13e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.53e-22 | 48 |
immune system | 2.53e-22 | 48 |
hematopoietic system | 1.53e-20 | 45 |
blood island | 1.53e-20 | 45 |
hemopoietic organ | 6.44e-15 | 29 |
immune organ | 6.44e-15 | 29 |
gland of gut | 6.68e-12 | 24 |
thymus | 1.88e-11 | 23 |
neck | 1.88e-11 | 23 |
respiratory system epithelium | 1.88e-11 | 23 |
hemolymphoid system gland | 1.88e-11 | 23 |
pharyngeal epithelium | 1.88e-11 | 23 |
thymic region | 1.88e-11 | 23 |
pharyngeal gland | 1.88e-11 | 23 |
entire pharyngeal arch endoderm | 1.88e-11 | 23 |
thymus primordium | 1.88e-11 | 23 |
early pharyngeal endoderm | 1.88e-11 | 23 |
mixed endoderm/mesoderm-derived structure | 5.20e-11 | 35 |
pharynx | 1.44e-10 | 24 |
upper respiratory tract | 1.44e-10 | 24 |
chordate pharynx | 1.44e-10 | 24 |
pharyngeal arch system | 1.44e-10 | 24 |
pharyngeal region of foregut | 1.44e-10 | 24 |
respiratory system | 6.82e-09 | 42 |
lateral plate mesoderm | 1.33e-08 | 87 |
respiratory tract | 1.72e-08 | 41 |
segment of respiratory tract | 2.34e-08 | 27 |
foregut | 9.25e-08 | 80 |
bone element | 5.65e-07 | 22 |
skeletal element | 5.65e-07 | 22 |
skeletal system | 5.65e-07 | 22 |