FFCP PHASE1:Mm9::chr7:6124098..6124133,+: Difference between revisions
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{{FFCP|EntrezGene=72667|HGNC=|UniProt=Q3TDV8|association_with_transcript=0bp_to_ENSMUST00000054680,ENSMUST00000108566,NM_001146024,NM_028316,uc009fat.2,uc009fau.2_5end|description=CAGE_peak_1_at_Zfp444_5end|id=chr7:6124098..6124133,+|ontology_enrichment_celltype=CL:0000117!5.22e-13!23;CL:0000337!5.22e-13!23;CL:0000540!5.65e-11!33;CL:0000047!5.65e-11!33;CL:0000031!5.65e-11!33;CL:0000404!5.65e-11!33;CL:0000221!5.03e-10!44;CL:0000133!5.03e-10!44;CL:0002319!7.47e-10!43;CL:0000393!8.09e-07!39;CL:0000211!8.09e-07!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.22e-13,23;CL:0000337,5.22e-13,23;CL:0000540,5.65e-11,33;CL:0000047,5.65e-11,33;CL:0000031,5.65e-11,33;CL:0000404,5.65e-11,33;CL:0000221,5.03e-10,44;CL:0000133,5.03e-10,44;CL:0002319,7.47e-10,43;CL:0000393,8.08e-07,39;CL:0000211,8.08e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007811!1.91e-11!86;UBERON:0002346!2.01e-11!71;UBERON:0003075!2.01e-11!71;UBERON:0007284!2.01e-11!71;UBERON:0000073!2.25e-11!75;UBERON:0001016!2.25e-11!75;UBERON:0001017!4.92e-11!73;UBERON:0005743!4.92e-11!73;UBERON:0000153!6.64e-11!94;UBERON:0004121!2.38e-10!102;UBERON:0000924!2.38e-10!102;UBERON:0006601!2.38e-10!102;UBERON:0000033!1.61e-09!63;UBERON:0003056!5.61e-09!49;UBERON:0001049!5.36e-08!52;UBERON:0005068!5.36e-08!52;UBERON:0006241!5.36e-08!52;UBERON:0007135!5.36e-08!52;UBERON:0000955!4.51e-07!50;UBERON:0006238!4.51e-07!50;UBERON:0002616!9.82e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.17e-12,64;UBERON:0003075,9.17e-12,64;UBERON:0007284,9.17e-12,64;UBERON:0001016,2.29e-11,75;UBERON:0001017,5.02e-11,73;UBERON:0004121,2.31e-10,95;UBERON:0000924,2.31e-10,95;UBERON:0006601,2.31e-10,95;UBERON:0003056,5.72e-09,49;UBERON:0000073,8.86e-09,54;UBERON:0010371,5.45e-08,73;UBERON:0001049,5.45e-08,52;UBERON:0005068,5.45e-08,52;UBERON:0006241,5.45e-08,52;UBERON:0007135,5.45e-08,52|phase1_expression=2.7225304007815,2.09385244583617,3.18499467572675,2.72217790176147,2.50447864973174,2.85394762250213,2.33612640595526,4.39019299701359,2.111830832275,1.17032263160997,6.67750076079469,4.86610169871552,7.19043065711064,6.03200776691082,0.999329285446988,1.41732687172878,1.39912375625629,4.88966356305268,2.05671650408608,1.27316895539409,5.27268398936633,3.3758923408301,6.00759515019551,2.55987876469451,3.44113921600755,2.29692785646008,0.86152399231815,2.37018355954478,3.04037471130198,4.03248207615889,1.99557459589774,3.17515336729816,4.30545351309199,0,1.73310971850765,3.32469290716985,3.67504841272264,6.69650609179052,4.6880120671428,4.18818995179039,2.35292595212406,2.04913645487534,4.85510353031154,1.00717454380462,1.72340783073175,2.56965453026354,3.12956537739216,3.70642765846759,1.75748946187577,2.13872888981712,2.09979632438044,4.31257693094915,3.35565212115473,4.35217285206807,2.35265659399725,2.05807548828758,1.43266719969378,2.06268836910977,8.49729135610311,9.52183762689659,12.6766280701236,5.08266798103698,1.77858959222228,9.44894703145469,17.7995945262055,17.7620028736525,8.08920298399693,5.37905627450176,5.28817022773236,8.6403800532282,6.30974884054146,7.9982275633065,6.40518768759679,9.43179153955146,9.58454710182364,6.43453150627015,6.60695285996332,4.46905683298157,4.91540906419979,9.49581271657396,11.7104183811084,8.33461392890816,5.58365998002762,7.87867654044352,7.02871939773326,8.2496003932627,5.41012387036591,9.69277118291563,3.71058347332602,5.13886608726142,1.73918693221007,1.72084775396277,0.679971333707751,2.15881276655127,3.24888208723835,3.13618820968135,2.24711072210803,1.70430322578058,2.59786004602869,2.47337702157238,4.3661460130771,3.84979432242953,10.1922095882658,7.11066703153331,3.89683873820185,3.54703811665138,2.52762222507392,3.9964357901671,4.40194402200192,2.22663208597237,3.81667718885499,3.95805121805784,5.30415643688935,3.76806601381556,3.29248379979973,2.63899841792318,2.22475470960936,1.01219549843938,0,2.75003644910596,2.87093973998512,0.484875253135222,5.59175283654366,4.39171195517321,5.02672096352292,1.53274233125155,3.95389910869537,3.59941638596045,3.04968544975355,4.04434726393021,1.37250180845588,12.062817802835,2.25971616249959,2.55715457330331,3.74018480207208,3.89379031362618,3.05518091550949,1.8661045591514,2.0217820674694,5.47148825304832,5.98554037628437,9.42598628177239,5.04173963454978,5.87748789559289,9.0488543871266,12.9394857487698,17.8970293909082,14.2286853906459,6.03590380211958,4.16033376369202,4.04687585577082,2.6303487891309,1.94633074457919,1.39300866608867,3.08673204611915,5.7719937377363,5.61770549850588,4.11756651383544,2.27330799516474,3.52113813310353,3.51789089971644,3.96136535214233,2.3674473558521,2.36117078096885,3.39387648352232,3.25547522650571,2.95100741539581,2.91913355917924,1.97471819896177,1.97000956894914,1.4592385718254,1.75439984910399,2.19550115291051,1.20785776884335,3.15434922846191,6.38008596751563,1.98251269790279,1.05780226665418,5.33220626338085,4.18026009348789,2.83508414908605,1.61346819698674,2.44615848229357,1.90225626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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72667 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q3TDV8 | |||
|association_with_transcript=0bp_to_ENSMUST00000054680,ENSMUST00000108566,NM_001146024,NM_028316,uc009fat.2,uc009fau.2_5end | |||
|cluster_id=chr7:6124098..6124133,+ | |||
|description=CAGE_peak_1_at_Zfp444_5end | |||
|id=chr7:6124098..6124133,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.22e-13!23;CL:0000337!5.22e-13!23;CL:0000540!5.65e-11!33;CL:0000047!5.65e-11!33;CL:0000031!5.65e-11!33;CL:0000404!5.65e-11!33;CL:0000221!5.03e-10!44;CL:0000133!5.03e-10!44;CL:0002319!7.47e-10!43;CL:0000393!8.09e-07!39;CL:0000211!8.09e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.22e-13,23;CL:0000337,5.22e-13,23;CL:0000540,5.65e-11,33;CL:0000047,5.65e-11,33;CL:0000031,5.65e-11,33;CL:0000404,5.65e-11,33;CL:0000221,5.03e-10,44;CL:0000133,5.03e-10,44;CL:0002319,7.47e-10,43;CL:0000393,8.08e-07,39;CL:0000211,8.08e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!1.91e-11!86;UBERON:0002346!2.01e-11!71;UBERON:0003075!2.01e-11!71;UBERON:0007284!2.01e-11!71;UBERON:0000073!2.25e-11!75;UBERON:0001016!2.25e-11!75;UBERON:0001017!4.92e-11!73;UBERON:0005743!4.92e-11!73;UBERON:0000153!6.64e-11!94;UBERON:0004121!2.38e-10!102;UBERON:0000924!2.38e-10!102;UBERON:0006601!2.38e-10!102;UBERON:0000033!1.61e-09!63;UBERON:0003056!5.61e-09!49;UBERON:0001049!5.36e-08!52;UBERON:0005068!5.36e-08!52;UBERON:0006241!5.36e-08!52;UBERON:0007135!5.36e-08!52;UBERON:0000955!4.51e-07!50;UBERON:0006238!4.51e-07!50;UBERON:0002616!9.82e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.17e-12,64;UBERON:0003075,9.17e-12,64;UBERON:0007284,9.17e-12,64;UBERON:0001016,2.29e-11,75;UBERON:0001017,5.02e-11,73;UBERON:0004121,2.31e-10,95;UBERON:0000924,2.31e-10,95;UBERON:0006601,2.31e-10,95;UBERON:0003056,5.72e-09,49;UBERON:0000073,8.86e-09,54;UBERON:0010371,5.45e-08,73;UBERON:0001049,5.45e-08,52;UBERON:0005068,5.45e-08,52;UBERON:0006241,5.45e-08,52;UBERON:0007135,5.45e-08,52 | |||
|phase1_expression=2.7225304007815,2.09385244583617,3.18499467572675,2.72217790176147,2.50447864973174,2.85394762250213,2.33612640595526,4.39019299701359,2.111830832275,1.17032263160997,6.67750076079469,4.86610169871552,7.19043065711064,6.03200776691082,0.999329285446988,1.41732687172878,1.39912375625629,4.88966356305268,2.05671650408608,1.27316895539409,5.27268398936633,3.3758923408301,6.00759515019551,2.55987876469451,3.44113921600755,2.29692785646008,0.86152399231815,2.37018355954478,3.04037471130198,4.03248207615889,1.99557459589774,3.17515336729816,4.30545351309199,0,1.73310971850765,3.32469290716985,3.67504841272264,6.69650609179052,4.6880120671428,4.18818995179039,2.35292595212406,2.04913645487534,4.85510353031154,1.00717454380462,1.72340783073175,2.56965453026354,3.12956537739216,3.70642765846759,1.75748946187577,2.13872888981712,2.09979632438044,4.31257693094915,3.35565212115473,4.35217285206807,2.35265659399725,2.05807548828758,1.43266719969378,2.06268836910977,8.49729135610311,9.52183762689659,12.6766280701236,5.08266798103698,1.77858959222228,9.44894703145469,17.7995945262055,17.7620028736525,8.08920298399693,5.37905627450176,5.28817022773236,8.6403800532282,6.30974884054146,7.9982275633065,6.40518768759679,9.43179153955146,9.58454710182364,6.43453150627015,6.60695285996332,4.46905683298157,4.91540906419979,9.49581271657396,11.7104183811084,8.33461392890816,5.58365998002762,7.87867654044352,7.02871939773326,8.2496003932627,5.41012387036591,9.69277118291563,3.71058347332602,5.13886608726142,1.73918693221007,1.72084775396277,0.679971333707751,2.15881276655127,3.24888208723835,3.13618820968135,2.24711072210803,1.70430322578058,2.59786004602869,2.47337702157238,4.3661460130771,3.84979432242953,10.1922095882658,7.11066703153331,3.89683873820185,3.54703811665138,2.52762222507392,3.9964357901671,4.40194402200192,2.22663208597237,3.81667718885499,3.95805121805784,5.30415643688935,3.76806601381556,3.29248379979973,2.63899841792318,2.22475470960936,1.01219549843938,0,2.75003644910596,2.87093973998512,0.484875253135222,5.59175283654366,4.39171195517321,5.02672096352292,1.53274233125155,3.95389910869537,3.59941638596045,3.04968544975355,4.04434726393021,1.37250180845588,12.062817802835,2.25971616249959,2.55715457330331,3.74018480207208,3.89379031362618,3.05518091550949,1.8661045591514,2.0217820674694,5.47148825304832,5.98554037628437,9.42598628177239,5.04173963454978,5.87748789559289,9.0488543871266,12.9394857487698,17.8970293909082,14.2286853906459,6.03590380211958,4.16033376369202,4.04687585577082,2.6303487891309,1.94633074457919,1.39300866608867,3.08673204611915,5.7719937377363,5.61770549850588,4.11756651383544,2.27330799516474,3.52113813310353,3.51789089971644,3.96136535214233,2.3674473558521,2.36117078096885,3.39387648352232,3.25547522650571,2.95100741539581,2.91913355917924,1.97471819896177,1.97000956894914,1.4592385718254,1.75439984910399,2.19550115291051,1.20785776884335,3.15434922846191,6.38008596751563,1.98251269790279,1.05780226665418,5.33220626338085,4.18026009348789,2.83508414908605,1.61346819698674,2.44615848229357,1.90225626112559,4.74529061544512,2.47048432086016,3.77002813200404,2.38747766449381,2.14460495831032,3.59527763461689,3.6743468478698,1.59313018603494,3.98302592001472,4.22719496655997,5.63538678365402,5.09128319613286,4.07300223052014,5.89140887078676,2.71917109634306,3.24742325555125,4.70996183524124,4.56569506510662,7.41131567717872,2.00214126859313,1.76903095601883,1.12431056192427,2.63718157805054,4.58236603529592,2.80088436959562,4.02774592431135,4.05338066937588,5.21666685057355,5.75072826109418,4.83783231969054,4.05648975048929,6.06189307073068,2.87035861635059,8.68398338454061,2.40179147216586,5.30575952957357,4.4000543639347,3.39490171550376,2.34690248288502,3.35012514883632,2.85652369063216,3.12213836572478,2.83743259391144,1.99318220683897,2.87018583583477,2.94953966488328,2.24490476425664,2.60368305446721,7.53956419696361,4.35124547054968,2.45882136509518,1.65562047782839,5.29816946959713,3.8679856575427,3.27869890753351,1.51482556322624,2.83957397474631,3.12350995437311,4.30846795465598,3.10659437338318,5.12436950389506,4.81230102341015,2.02405350837447,5.26060544240361,3.95287777946523,5.78378369559253,2.98074178937364,4.80777129901589,3.58351310577867,3.79431282836832,0,3.64170954232472,5.13950046840077,1.69744571780308,2.36241514304618,3.3817866273832,2.32585463851399,3.99887102425256,2.13898427030833,2.52829406348653,3.16255825724996,2.06271086496374,6.46835250932197,7.38250485528372,7.24408629183425,4.50107773566344,5.67488747655275,2.31879462882692,3.9491764944509,4.26250928760439,1.87737366450968,4.02480934641258,1.7642271844397,0.98931751764888,1.13025098687134,1.80938774784468,2.38744688006273,1.64140899745061,1.1659233465194,3.8939313422207,2.39219233116994,2.68302928352189,1.29636169158798,1.13021074202815,2.1871076435364,1.37266903923914,1.35982743995084,2.51912614182584,1.93479963326193,1.90934123603023,3.00519193902079,4.87966721104437,3.13215488383224,3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| |||
|short_description=p1@Zfp444 | |||
}} |
Latest revision as of 23:35, 26 September 2015
Short description: | p1@Zfp444 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Zfp444_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000054680, ENSMUST00000108566, NM_001146024, NM_028316, uc009fat.2, uc009fau.2_5end |
EntrezGene: | Zfp444 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.22e-13 | 23 |
neuroblast (sensu Vertebrata) | 5.22e-13 | 23 |
neuron | 5.65e-11 | 33 |
neuronal stem cell | 5.65e-11 | 33 |
neuroblast | 5.65e-11 | 33 |
electrically signaling cell | 5.65e-11 | 33 |
ectodermal cell | 5.03e-10 | 44 |
neurectodermal cell | 5.03e-10 | 44 |
neural cell | 7.47e-10 | 43 |
electrically responsive cell | 8.08e-07 | 39 |
electrically active cell | 8.08e-07 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 9.17e-12 | 64 |
neural plate | 9.17e-12 | 64 |
presumptive neural plate | 9.17e-12 | 64 |
nervous system | 2.29e-11 | 75 |
central nervous system | 5.02e-11 | 73 |
ectoderm-derived structure | 2.31e-10 | 95 |
ectoderm | 2.31e-10 | 95 |
presumptive ectoderm | 2.31e-10 | 95 |
pre-chordal neural plate | 5.72e-09 | 49 |
regional part of nervous system | 8.86e-09 | 54 |
ecto-epithelium | 5.45e-08 | 73 |
neural tube | 5.45e-08 | 52 |
neural rod | 5.45e-08 | 52 |
future spinal cord | 5.45e-08 | 52 |
neural keel | 5.45e-08 | 52 |