FFCP PHASE1:Hg19::chr12:88200166..88200190,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport= | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:88200166..88200190,- | |||
|description=CAGE_peak_at_chr12:88200166..88200190,- | |description=CAGE_peak_at_chr12:88200166..88200190,- | ||
|id=chr12:88200166..88200190,- | |id=chr12:88200166..88200190,- | ||
Latest revision as of 13:10, 24 July 2015
| Short description: | p@chr12:88200166..88200190, - |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr12:88200166..88200190, - |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr12:88200166..88200190- |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic cell | 3.88e-20 | 19 |
| mesangial cell | 1.44e-13 | 2 |
| kidney interstitial cell | 1.44e-13 | 2 |
| juxtaglomerular complex cell | 1.44e-13 | 2 |
| renal interstitial pericyte | 1.44e-13 | 2 |
| extraglomerular mesangial cell | 1.44e-13 | 2 |
| amniotic epithelial cell | 1.54e-13 | 2 |
| amnion mesenchymal stem cell | 2.45e-12 | 5 |
| placental epithelial cell | 4.54e-09 | 3 |
| mucus secreting cell | 2.17e-07 | 1 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 9.98e-28 | 14 |
| membranous layer | 9.98e-28 | 14 |
| amnion | 8.69e-23 | 7 |
| somatic layer of lateral plate mesoderm | 6.37e-20 | 8 |
| extraembryonic structure | 1.05e-15 | 24 |
| abdomen connective tissue | 1.44e-13 | 2 |
| abdominal segment connective tissue | 1.44e-13 | 2 |
| trunk connective tissue | 1.44e-13 | 2 |
| interstitial tissue | 1.44e-13 | 2 |
| extraglomerular mesangium | 1.44e-13 | 2 |
Showing 1 to 10 of 27 entries
| Ontology term | p-value | n |
|---|---|---|
| papillary adenocarcinoma | 6.80e-08 | 1 |
| liver cancer | 1.58e-07 | 1 |
| mucinous adenocarcinoma | 2.17e-07 | 1 |
Showing 1 to 3 of 3 entries
