FFCP PHASE1:Hg19::chr3:170150640..170150647,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:170150640..170150647,+ | |||
|description=CAGE_peak_at_chr3:170150640..170150647,+ | |description=CAGE_peak_at_chr3:170150640..170150647,+ | ||
|id=chr3:170150640..170150647,+ | |id=chr3:170150640..170150647,+ | ||
Latest revision as of 18:10, 29 July 2015
| Short description: | p@chr3:170150640..170150647, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:170150640..170150647, + |
| Coexpression cluster: | NA |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p@chr3:170150640..170150647+ |
|---|
0.0
0.5
1.0
1.5
2.0
2.5
3.0
3.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| visceral preadipocyte | 5.31e-27 | 3 |
| smooth muscle cell of the esophagus | 2.82e-21 | 1 |
| smooth muscle cell of prostate | 2.02e-11 | 2 |
| prostate stromal cell | 7.26e-08 | 3 |
| preadipocyte | 1.73e-07 | 12 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| cranial nerve II | 3.45e-21 | 1 |
| cranial nerve | 3.45e-21 | 1 |
| nerve trunk | 3.45e-21 | 1 |
| nerve connecting eye with brain | 3.45e-21 | 1 |
| nerve | 3.45e-21 | 1 |
| retinal neural layer | 3.45e-21 | 1 |
| presumptive neural retina | 3.45e-21 | 1 |
| neural tissue | 2.73e-11 | 2 |
| multi cell component structure | 2.73e-11 | 2 |
| neuron projection bundle | 2.73e-11 | 2 |
Showing 1 to 10 of 24 entries
