FFCP PHASE1:Mm9::chr16:31311157..31311167,-: Difference between revisions
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|id=chr16:31311157..31311167,-
|short_description=p7@Apod,p7@LOC100047583
|description=CAGE_peak_7_at_Apod_5end,CAGE_peak_7_at_LOC100047583_5end
|association_with_t...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=100047583,11815 | |EntrezGene=100047583,11815 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1378 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=266bp_to_ENSMUST00000145837_5end | |||
|cluster_id=chr16:31311157..31311167,- | |||
|description=CAGE_peak_7_at_Apod_5end,CAGE_peak_7_at_LOC100047583_5end | |||
|id=chr16:31311157..31311167,- | |||
|ontology_enrichment_celltype=CL:0002319!3.42e-10!43;CL:0000221!7.67e-10!44;CL:0000133!7.67e-10!44;CL:0000055!5.33e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002614,1.68e-27,3;CL:0000878,3.56e-18,2;CL:0000129,3.56e-18,2;CL:0002319,4.34e-16,43;CL:0000221,1.03e-15,44;CL:0000133,1.03e-15,44;CL:0000333,2.34e-14,10;CL:0000095,2.34e-14,10;CL:0000243,2.34e-14,10;CL:0000123,2.34e-14,10;CL:0000125,2.34e-14,10;CL:0000030,2.34e-14,10;CL:0000339,2.34e-14,10;CL:0002453,1.50e-10,8;CL:0002374,1.03e-09,1;CL:0000202,1.03e-09,1;CL:0000199,1.03e-09,1;CL:0000855,1.03e-09,1;CL:0000589,1.03e-09,1;CL:0002321,1.06e-09,70;CL:0002194,1.40e-09,4;CL:0000766,1.40e-09,4;CL:0000234,1.40e-09,4;CL:0000576,1.40e-09,4;CL:0000235,1.40e-09,4;CL:0000864,1.40e-09,4;CL:0002009,1.40e-09,4;CL:0000040,1.40e-09,4;CL:0000559,1.40e-09,4;CL:0000540,9.35e-07,33;CL:0000047,9.35e-07,33;CL:0000031,9.35e-07,33;CL:0000404,9.35e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.85e-20!102;UBERON:0000924!3.85e-20!102;UBERON:0006601!3.85e-20!102;UBERON:0000073!2.00e-19!75;UBERON:0001016!2.00e-19!75;UBERON:0001017!1.18e-18!73;UBERON:0005743!1.18e-18!73;UBERON:0000033!1.64e-14!63;UBERON:0001049!1.52e-12!52;UBERON:0005068!1.52e-12!52;UBERON:0006241!1.52e-12!52;UBERON:0007135!1.52e-12!52;UBERON:0002346!7.03e-12!71;UBERON:0003075!7.03e-12!71;UBERON:0007284!7.03e-12!71;UBERON:0002298!6.67e-11!6;UBERON:0003076!7.47e-11!12;UBERON:0003057!7.47e-11!12;UBERON:0000955!1.17e-10!50;UBERON:0006238!1.17e-10!50;UBERON:0002616!1.14e-09!49;UBERON:0007811!2.44e-09!86;UBERON:0000153!9.90e-09!94;UBERON:0002950!7.76e-08!4;UBERON:0001891!7.76e-08!4;UBERON:0009616!7.76e-08!4;UBERON:0002240!2.68e-07!6;UBERON:0005174!2.68e-07!6;UBERON:0001137!2.68e-07!6;UBERON:0003056!8.27e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002038,1.68e-27,3;UBERON:0009663,1.68e-27,3;UBERON:0009661,1.68e-27,3;UBERON:0000125,1.68e-27,3;UBERON:0002308,1.68e-27,3;UBERON:0002950,8.04e-21,4;UBERON:0001891,8.04e-21,4;UBERON:0009616,8.04e-21,4;UBERON:0010286,8.04e-21,4;UBERON:0001016,2.99e-11,75;UBERON:0002420,9.54e-11,8;UBERON:0007245,9.54e-11,8;UBERON:0010009,9.54e-11,8;UBERON:0010011,9.54e-11,8;UBERON:0000454,9.54e-11,8;UBERON:0001017,2.53e-09,73;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95 | |||
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,8.60630478782843,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,1.53687322128622,0,0,0,0.856952953211411,0.883474163806454,0,0,0,0,0.255374676170375,1.38245879930619,0,0,0,3.90856198601933,1.68828783009504,2.59757021220577,0.589257170947335,0.569486723196412,0,0,1.20914496170857,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0.83778682725382,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0.41557608911912,0.324482526135515,0,0,0.505445516867349,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0,0.252470927204373,0,0,0,0,0.668396022247182,0,0,0.292255857911312,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.68741272937475,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202753862439029,0,8.60630478782843,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,0,0,0,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,1.53687322128622,0,0,0,0.856952953211411,0.883474163806454,0,0,0,0,0.255374676170375,1.38245879930619,0,0,0,3.90856198601933,1.68828783009504,2.59757021220577,0.589257170947335,0.569486723196412,0,0,1.20914496170857,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0.83778682725382,0,0,0,0,0.299581278809645,0,0,0.173824320192276,0,0.41557608911912,0.324482526135515,0,0,0.505445516867349,0.210441855886474,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0.517406741478031,0,0,0,0,0.556094498451196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.820481806145422,0,0.252470927204373,0,0,0,0,0.668396022247182,0,0,0.292255857911312,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.329098041204242,0,0,0,0.220528398054962,0.32977250588296,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0.68741272937475,0,0,0,0,0.453142408984205,0.51776031175182,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Apod,p7@LOC100047583 | |||
}} | }} |
Latest revision as of 20:57, 1 October 2015
Short description: | p7@Apod, p7@LOC100047583 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Apod_5end, CAGE_peak_7_at_LOC100047583_5end |
Coexpression cluster: | MCL_coexpression_mm9:1378 |
Association with transcript: | 266bp_to_ENSMUST00000145837_5end |
EntrezGene: | 100047583,11815 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the substantia nigra | 1.68e-27 | 3 |
central nervous system macrophage | 3.56e-18 | 2 |
microglial cell | 3.56e-18 | 2 |
neural cell | 4.34e-16 | 43 |
ectodermal cell | 1.03e-15 | 44 |
neurectodermal cell | 1.03e-15 | 44 |
migratory neural crest cell | 2.34e-14 | 10 |
neuron associated cell | 2.34e-14 | 10 |
glial cell (sensu Vertebrata) | 2.34e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 2.34e-14 | 10 |
glial cell | 2.34e-14 | 10 |
glioblast | 2.34e-14 | 10 |
glioblast (sensu Vertebrata) | 2.34e-14 | 10 |
oligodendrocyte precursor cell | 1.50e-10 | 8 |
ear hair cell | 1.03e-09 | 1 |
auditory hair cell | 1.03e-09 | 1 |
mechanoreceptor cell | 1.03e-09 | 1 |
sensory hair cell | 1.03e-09 | 1 |
cochlear inner hair cell | 1.03e-09 | 1 |
embryonic cell | 1.06e-09 | 70 |
monopoietic cell | 1.40e-09 | 4 |
myeloid leukocyte | 1.40e-09 | 4 |
phagocyte | 1.40e-09 | 4 |
monocyte | 1.40e-09 | 4 |
macrophage | 1.40e-09 | 4 |
tissue-resident macrophage | 1.40e-09 | 4 |
macrophage dendritic cell progenitor | 1.40e-09 | 4 |
monoblast | 1.40e-09 | 4 |
promonocyte | 1.40e-09 | 4 |
neuron | 9.35e-07 | 33 |
neuronal stem cell | 9.35e-07 | 33 |
neuroblast | 9.35e-07 | 33 |
electrically signaling cell | 9.35e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 1.68e-27 | 3 |
telencephalic nucleus | 1.68e-27 | 3 |
midbrain nucleus | 1.68e-27 | 3 |
neural nucleus | 1.68e-27 | 3 |
nucleus of brain | 1.68e-27 | 3 |
regional part of midbrain | 8.04e-21 | 4 |
midbrain | 8.04e-21 | 4 |
presumptive midbrain | 8.04e-21 | 4 |
midbrain neural tube | 8.04e-21 | 4 |
nervous system | 2.99e-11 | 75 |
basal ganglion | 9.54e-11 | 8 |
nuclear complex of neuraxis | 9.54e-11 | 8 |
aggregate regional part of brain | 9.54e-11 | 8 |
collection of basal ganglia | 9.54e-11 | 8 |
cerebral subcortex | 9.54e-11 | 8 |
central nervous system | 2.53e-09 | 73 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |