FFCP PHASE1:Mm9::chr19:57552033..57552048,+: Difference between revisions
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|id=chr19:57552033..57552048,+
|short_description=p@chr19:57552033..57552048,+
|description=CAGE_peak_at_chr19:57552033..57552048,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=319 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:57552033..57552048,+ | |||
|description=CAGE_peak_at_chr19:57552033..57552048,+ | |||
|id=chr19:57552033..57552048,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.88e-52!9;CL:0000789!1.88e-52!9;CL:0002420!1.88e-52!9;CL:0002419!1.88e-52!9;CL:0000790!1.88e-52!9;CL:0000624!2.48e-45!8;CL:0000084!7.40e-43!11;CL:0000827!7.40e-43!11;CL:0000838!2.95e-39!12;CL:0000542!3.30e-36!13;CL:0000051!3.30e-36!13;CL:0000893!3.18e-31!6;CL:0002489!3.18e-31!6;CL:0000898!3.18e-31!6;CL:0000809!3.18e-31!6;CL:0000810!3.18e-31!6;CL:0000895!3.18e-31!6;CL:0000808!3.18e-31!6;CL:0000894!3.18e-31!6;CL:0000806!3.18e-31!6;CL:0000807!3.18e-31!6;CL:0000805!3.18e-31!6;CL:0002425!3.18e-31!6;CL:0002436!3.18e-31!6;CL:0002427!3.18e-31!6;CL:0002428!3.18e-31!6;CL:0002429!3.18e-31!6;CL:0002433!3.18e-31!6;CL:0002431!3.18e-31!6;CL:0002432!3.18e-31!6;CL:0000738!1.36e-27!17;CL:0002087!1.36e-27!17;CL:0002031!1.31e-18!25;CL:0000988!2.04e-14!32;CL:0002032!2.04e-14!32;CL:0000037!2.04e-14!32;CL:0000566!2.04e-14!32;CL:0000837!2.04e-14!32;CL:0002320!7.71e-10!46;CL:0000134!7.71e-10!46;CL:0000815!6.23e-09!1;CL:0000792!6.23e-09!1;CL:0000625!8.81e-09!1;CL:0000219!2.79e-08!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.47e-48,9;CL:0000789,1.47e-48,9;CL:0002420,1.47e-48,9;CL:0002419,1.47e-48,9;CL:0000790,1.47e-48,9;CL:0000084,6.64e-40,11;CL:0000827,6.64e-40,11;CL:0000838,1.18e-36,12;CL:0000624,1.94e-35,8;CL:0000542,6.63e-34,13;CL:0000051,6.63e-34,13;CL:0000893,5.66e-27,6;CL:0002489,5.66e-27,6;CL:0000898,5.66e-27,6;CL:0000809,5.66e-27,6;CL:0000810,5.66e-27,6;CL:0000895,5.66e-27,6;CL:0000808,5.66e-27,6;CL:0000894,5.66e-27,6;CL:0000806,5.66e-27,6;CL:0000807,5.66e-27,6;CL:0000805,5.66e-27,6;CL:0002425,5.66e-27,6;CL:0002436,5.66e-27,6;CL:0002427,5.66e-27,6;CL:0002428,5.66e-27,6;CL:0002429,5.66e-27,6;CL:0002433,5.66e-27,6;CL:0002431,5.66e-27,6;CL:0002432,5.66e-27,6;CL:0000738,3.95e-26,17;CL:0002087,3.95e-26,17;CL:0000815,1.16e-18,1;CL:0000792,1.16e-18,1;CL:0000625,2.59e-18,1;CL:0002031,5.10e-18,25;CL:0000988,3.12e-14,32;CL:0002032,3.12e-14,32;CL:0000037,3.12e-14,32;CL:0000837,3.12e-14,32;CL:0002320,4.29e-10,46;CL:0000134,4.29e-10,46;CL:0000219,1.10e-08,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!2.60e-15!23;UBERON:0000974!2.60e-15!23;UBERON:0004807!2.60e-15!23;UBERON:0005058!2.60e-15!23;UBERON:0003351!2.60e-15!23;UBERON:0009113!2.60e-15!23;UBERON:0003295!2.60e-15!23;UBERON:0009722!2.60e-15!23;UBERON:0005562!2.60e-15!23;UBERON:0007690!2.60e-15!23;UBERON:0006562!1.17e-14!24;UBERON:0003408!1.17e-14!24;UBERON:0001557!1.17e-14!24;UBERON:0001042!1.17e-14!24;UBERON:0008814!1.17e-14!24;UBERON:0009145!1.17e-14!24;UBERON:0000072!5.51e-13!27;UBERON:0004177!4.63e-12!29;UBERON:0000063!6.45e-10!35;UBERON:0002384!7.71e-10!46;UBERON:0000065!2.14e-08!41;UBERON:0001004!3.49e-08!42;UBERON:0002390!1.32e-07!45;UBERON:0003061!1.32e-07!45;UBERON:0002193!4.26e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.29e-10,46;UBERON:0002370,1.18e-07,23;UBERON:0000974,1.18e-07,23;UBERON:0004807,1.18e-07,23;UBERON:0005058,1.18e-07,23;UBERON:0003351,1.18e-07,23;UBERON:0009113,1.18e-07,23;UBERON:0003295,1.18e-07,23;UBERON:0009722,1.18e-07,23;UBERON:0005562,1.18e-07,23;UBERON:0007690,1.18e-07,23;UBERON:0006562,2.29e-07,24;UBERON:0003408,2.29e-07,24;UBERON:0001557,2.29e-07,24;UBERON:0001042,2.29e-07,24;UBERON:0008814,2.29e-07,24;UBERON:0009145,2.29e-07,24 | |||
|phase1_expression=0,0,0,0,0,0,0,3.61545305636414,0.281577444303333,9.36258105287974,0,0.478632953972018,2.73921167889929,5.85716696207283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,3.61545305636414,0.281577444303333,9.36258105287974,0,0.478632953972018,2.73921167889929,5.85716696207283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725362142011344,1.00828139742739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:57552033..57552048,+ | |||
}} | }} |
Latest revision as of 09:55, 4 August 2015
Short description: | p@chr19:57552033..57552048, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:57552033..57552048, + |
Coexpression cluster: | MCL_coexpression_mm9:319 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.29e-10 | 46 |
thymus | 1.18e-07 | 23 |
neck | 1.18e-07 | 23 |
respiratory system epithelium | 1.18e-07 | 23 |
hemolymphoid system gland | 1.18e-07 | 23 |
pharyngeal epithelium | 1.18e-07 | 23 |
thymic region | 1.18e-07 | 23 |
pharyngeal gland | 1.18e-07 | 23 |
entire pharyngeal arch endoderm | 1.18e-07 | 23 |
thymus primordium | 1.18e-07 | 23 |
early pharyngeal endoderm | 1.18e-07 | 23 |
pharynx | 2.29e-07 | 24 |
gland of gut | 2.29e-07 | 24 |
upper respiratory tract | 2.29e-07 | 24 |
chordate pharynx | 2.29e-07 | 24 |
pharyngeal arch system | 2.29e-07 | 24 |
pharyngeal region of foregut | 2.29e-07 | 24 |