FFCP PHASE1:Mm9::chr1:162237570..162237583,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:162237570..162237583,-
|short_description=p@chr1:162237570..162237583,-
|description=CAGE_peak_at_chr1:162237570..162237583,-
|association_with_transcript=...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=382 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:162237570..162237583,- | |||
|description=CAGE_peak_at_chr1:162237570..162237583,- | |||
|id=chr1:162237570..162237583,- | |||
|ontology_enrichment_celltype=CL:0000988!1.92e-08!32;CL:0002032!1.92e-08!32;CL:0000037!1.92e-08!32;CL:0000566!1.92e-08!32;CL:0000837!1.92e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.92e-12,32;CL:0002032,9.92e-12,32;CL:0000037,9.92e-12,32;CL:0000837,9.92e-12,32;CL:0000084,8.47e-10,11;CL:0000827,8.47e-10,11;CL:0000838,6.30e-09,12;CL:0000542,3.45e-08,13;CL:0000051,3.45e-08,13;CL:0002320,1.96e-07,46;CL:0000134,1.96e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.74e-14!70;UBERON:0002193!1.27e-12!48;UBERON:0002390!4.86e-12!45;UBERON:0003061!4.86e-12!45;UBERON:0005057!6.43e-12!51;UBERON:0004177!3.34e-11!29;UBERON:0002370!6.96e-10!23;UBERON:0000974!6.96e-10!23;UBERON:0004807!6.96e-10!23;UBERON:0005058!6.96e-10!23;UBERON:0003351!6.96e-10!23;UBERON:0009113!6.96e-10!23;UBERON:0003295!6.96e-10!23;UBERON:0009722!6.96e-10!23;UBERON:0005562!6.96e-10!23;UBERON:0007690!6.96e-10!23;UBERON:0003929!1.35e-09!55;UBERON:0006562!3.17e-09!24;UBERON:0003408!3.17e-09!24;UBERON:0001557!3.17e-09!24;UBERON:0001042!3.17e-09!24;UBERON:0008814!3.17e-09!24;UBERON:0009145!3.17e-09!24;UBERON:0005911!3.84e-09!69;UBERON:0001041!3.64e-08!92;UBERON:0003081!3.78e-08!88;UBERON:0000072!1.45e-07!27;UBERON:0000077!4.17e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,9.16e-15,29;UBERON:0005057,9.16e-15,29;UBERON:0002370,9.87e-14,23;UBERON:0000974,9.87e-14,23;UBERON:0004807,9.87e-14,23;UBERON:0005058,9.87e-14,23;UBERON:0003351,9.87e-14,23;UBERON:0009113,9.87e-14,23;UBERON:0003295,9.87e-14,23;UBERON:0009722,9.87e-14,23;UBERON:0005562,9.87e-14,23;UBERON:0007690,9.87e-14,23;UBERON:0002390,1.46e-13,45;UBERON:0003061,1.46e-13,45;UBERON:0006562,4.50e-13,24;UBERON:0003408,4.50e-13,24;UBERON:0001557,4.50e-13,24;UBERON:0001042,4.50e-13,24;UBERON:0008814,4.50e-13,24;UBERON:0009145,4.50e-13,24;UBERON:0002193,1.66e-12,48;UBERON:0002405,1.66e-12,48;UBERON:0000077,8.69e-12,35;UBERON:0000072,2.18e-11,27;UBERON:0007811,5.00e-08,36;UBERON:0002384,1.96e-07,46;UBERON:0003081,2.93e-07,87;UBERON:0000065,8.38e-07,41 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,1.03298658753261,0.422366166455,0,0,0,2.56801094896809,1.48614684112296,0.333109761815663,0.404950534779652,0,1.10411757875383,0.685572168028694,1.69755860719212,0,11.6170412905036,10.1867917764185,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,1.10420759230197,0.484875253135222,0,0,0,0,4.31334448221313,1.79970819298022,3.30382590389968,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0,0.702213187313235,0.51469581422943,1.42081749697796,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50160595144485,0.196558995113203,0.674586337154561,0.811440485554012,0.241177159752417,0.50925170356284,0,0.972811360650212,1.09824565275233,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0.185194527369712,1.69531611304222,1.0935538217682,0,2.88963330989554,2.93898049879682,2.62579950228405,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.247960367176008,0.523511883968059,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.26404448251271,0.405450430580328,1.02710957164827,0.51968329191118,1.25318686967237,0.39736270956253,0.961563596159751,0.738447635872886,2.1202954489111,1.21930890648,1.71404514732629,1.36441033035653,1.73181314952593,2.92192255453922,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,0,0,0,0,0.16787927191189,0.467225281191051,1.03298658753261,0.422366166455,0,0,0,2.56801094896809,1.48614684112296,0.333109761815663,0.404950534779652,0,1.10411757875383,0.685572168028694,1.69755860719212,0,11.6170412905036,10.1867917764185,0.47997726838022,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0.204169356262369,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0.725362142011344,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0,0,0,0,0,0.117588707135705,0,0,0,0.884610551949874,0,1.10420759230197,0.484875253135222,0,0,0,0,4.31334448221313,1.79970819298022,3.30382590389968,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0.130120442962704,0,0,0,0,0,0,0,0.215567992932842,0,0,0.219195732427575,0,0,0.205782136407943,0,0.702213187313235,0.51469581422943,1.42081749697796,0,0.469052119962192,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50160595144485,0.196558995113203,0.674586337154561,0.811440485554012,0.241177159752417,0.50925170356284,0,0.972811360650212,1.09824565275233,0,0.372140947668503,0.312037673114561,0,0,0,0.554259570499814,0,0,0,0,0,0,0.195133647857799,0.157635144106191,0.221464689648775,0,0.163863314715738,0,0.144649058581512,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0.185194527369712,1.69531611304222,1.0935538217682,0,2.88963330989554,2.93898049879682,2.62579950228405,0.954670618015114,0,0,0.108005340821801,0,0.218362563746178,0.134864346384821,0.247960367176008,0.523511883968059,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,1.26404448251271,0.405450430580328,1.02710957164827,0.51968329191118,1.25318686967237,0.39736270956253,0.961563596159751,0.738447635872886,2.1202954489111,1.21930890648,1.71404514732629,1.36441033035653,1.73181314952593,2.92192255453922,0,0,0,0,0,0,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0,0.50695859978048,0.188626341386076,0.0936415074698824,0.0640251524048693,0.17230640686684,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0,0.0941093804153306,0.169229215783353,0,0,0.271608227691724,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr1:162237570..162237583,- | |||
}} | }} |
Latest revision as of 02:31, 5 August 2015
Short description: | p@chr1:162237570..162237583, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:162237570..162237583, - |
Coexpression cluster: | MCL_coexpression_mm9:382 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.92e-12 | 32 |
hematopoietic oligopotent progenitor cell | 9.92e-12 | 32 |
hematopoietic stem cell | 9.92e-12 | 32 |
hematopoietic multipotent progenitor cell | 9.92e-12 | 32 |
T cell | 8.47e-10 | 11 |
pro-T cell | 8.47e-10 | 11 |
lymphoid lineage restricted progenitor cell | 6.30e-09 | 12 |
lymphocyte | 3.45e-08 | 13 |
common lymphoid progenitor | 3.45e-08 | 13 |
connective tissue cell | 1.96e-07 | 46 |
mesenchymal cell | 1.96e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 9.16e-15 | 29 |
immune organ | 9.16e-15 | 29 |
thymus | 9.87e-14 | 23 |
neck | 9.87e-14 | 23 |
respiratory system epithelium | 9.87e-14 | 23 |
hemolymphoid system gland | 9.87e-14 | 23 |
pharyngeal epithelium | 9.87e-14 | 23 |
thymic region | 9.87e-14 | 23 |
pharyngeal gland | 9.87e-14 | 23 |
entire pharyngeal arch endoderm | 9.87e-14 | 23 |
thymus primordium | 9.87e-14 | 23 |
early pharyngeal endoderm | 9.87e-14 | 23 |
hematopoietic system | 1.46e-13 | 45 |
blood island | 1.46e-13 | 45 |
pharynx | 4.50e-13 | 24 |
gland of gut | 4.50e-13 | 24 |
upper respiratory tract | 4.50e-13 | 24 |
chordate pharynx | 4.50e-13 | 24 |
pharyngeal arch system | 4.50e-13 | 24 |
pharyngeal region of foregut | 4.50e-13 | 24 |
hemolymphoid system | 1.66e-12 | 48 |
immune system | 1.66e-12 | 48 |
mixed endoderm/mesoderm-derived structure | 8.69e-12 | 35 |
segment of respiratory tract | 2.18e-11 | 27 |
craniocervical region | 5.00e-08 | 36 |
connective tissue | 1.96e-07 | 46 |
lateral plate mesoderm | 2.93e-07 | 87 |
respiratory tract | 8.38e-07 | 41 |