FFCP PHASE1:Mm9::chr5:138721766..138721791,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:138721766..138721791,+
|short_description=p2@Stag3
|description=CAGE_peak_2_at_Stag3_5end
|association_with_transcript=0bp_to_ENSMUST00000161691,ENSMUST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=50878 | |EntrezGene=50878 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=E0CXH6,O70576,Q3TYZ1 | |UniProt=E0CXH6,O70576,Q3TYZ1 | ||
|association_with_transcript=0bp_to_ENSMUST00000161691,ENSMUST00000162245,uc009afm.1_5end | |||
|cluster_id=chr5:138721766..138721791,+ | |||
|description=CAGE_peak_2_at_Stag3_5end | |||
|id=chr5:138721766..138721791,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!6.70e-09!18;UBERON:0005564!6.70e-09!18;UBERON:0003133!1.06e-08!24;UBERON:0004176!2.67e-08!17;UBERON:0009196!2.67e-08!17;UBERON:0009117!2.67e-08!17;UBERON:0000473!7.74e-08!14;UBERON:0003135!2.13e-07!15;UBERON:0005156!4.28e-07!26;UBERON:0000990!4.28e-07!26 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000991,2.84e-18,18;UBERON:0005564,2.84e-18,18;UBERON:0004176,6.35e-17,17;UBERON:0009196,6.35e-17,17;UBERON:0009117,6.35e-17,17;UBERON:0003133,3.11e-16,24;UBERON:0000473,1.12e-15,14;UBERON:0005156,1.39e-14,26;UBERON:0000990,1.39e-14,26;UBERON:0003135,2.16e-14,15;UBERON:0003101,2.85e-13,16;UBERON:0000079,2.85e-13,16;UBERON:0002323,1.80e-12,37;UBERON:0004458,1.80e-12,37;UBERON:0003886,5.45e-12,38;UBERON:0002553,1.56e-11,39;UBERON:0000926,3.16e-10,120;UBERON:0004120,3.16e-10,120;UBERON:0006603,3.16e-10,120;UBERON:0000077,7.04e-08,35;UBERON:0004177,8.12e-08,29;UBERON:0005057,8.12e-08,29 | |||
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| ||
|short_description=p2@Stag3 | |||
}} | }} |
Latest revision as of 15:27, 25 September 2015
Short description: | p2@Stag3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Stag3_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 0bp_to_ENSMUST00000161691, ENSMUST00000162245, uc009afm.1_5end |
EntrezGene: | Stag3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gonad | 2.84e-18 | 18 |
gonad primordium | 2.84e-18 | 18 |
external genitalia | 6.35e-17 | 17 |
indifferent external genitalia | 6.35e-17 | 17 |
indifferent gonad | 6.35e-17 | 17 |
reproductive organ | 3.11e-16 | 24 |
testis | 1.12e-15 | 14 |
reproductive structure | 1.39e-14 | 26 |
reproductive system | 1.39e-14 | 26 |
male reproductive organ | 2.16e-14 | 15 |
male organism | 2.85e-13 | 16 |
male reproductive system | 2.85e-13 | 16 |
body cavity | 1.80e-12 | 37 |
body cavity or lining | 1.80e-12 | 37 |
body cavity precursor | 5.45e-12 | 38 |
anatomical cavity | 1.56e-11 | 39 |
mesoderm | 3.16e-10 | 120 |
mesoderm-derived structure | 3.16e-10 | 120 |
presumptive mesoderm | 3.16e-10 | 120 |
mixed endoderm/mesoderm-derived structure | 7.04e-08 | 35 |
hemopoietic organ | 8.12e-08 | 29 |
immune organ | 8.12e-08 | 29 |