FFCP PHASE1:Hg19::chr10:129848000..129848023,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:129848000..129848023,- to FFCP PHASE1:Hg19::chr10:129848000..129848023,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:129848000..129848023,- | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_at_chr10:129848000..129848023,- | |||
|id=chr10:129848000..129848023,- | |||
|ontology_enrichment_celltype=CL:0002057!4.97e-95!42;CL:0000860!6.95e-88!45;CL:0000766!3.85e-80!76;CL:0002009!2.19e-68!65;CL:0002194!1.99e-67!63;CL:0000576!1.99e-67!63;CL:0000040!1.99e-67!63;CL:0000559!1.99e-67!63;CL:0000557!1.31e-61!71;CL:0000738!6.49e-61!140;CL:0000839!1.58e-59!70;CL:0000763!2.42e-52!112;CL:0000049!2.42e-52!112;CL:0002087!7.38e-49!119;CL:0000037!1.22e-46!172;CL:0000566!1.22e-46!172;CL:0000988!3.33e-43!182;CL:0002031!4.32e-42!124;CL:0002032!8.93e-42!165;CL:0000837!8.93e-42!165;CL:0002393!1.24e-22!9;CL:0002397!1.24e-22!9;CL:0000094!7.11e-22!8;CL:0000081!1.91e-15!11;CL:0000134!6.06e-15!358;CL:0002320!2.35e-14!365;CL:0000219!2.76e-12!390;CL:0000048!4.55e-11!430;CL:0000034!7.89e-11!444;CL:0000723!1.07e-10!436;CL:0000775!1.33e-09!3;CL:0000767!3.42e-09!3;CL:0000842!7.18e-09!3;CL:0000875!1.03e-07!3;CL:0002396!1.03e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.38e-64;33!CL:0002057;2.38e-64;33!CL:0000576;1.36e-43;48!CL:0000473;1.47e-43;39!CL:0000234;1.47e-43;39!CL:0000766;2.87e-35;69!CL:0000094;3.07e-35;8!CL:0002393;8.95e-27;6!CL:0002397;8.95e-27;6!CL:0000081;2.88e-25;11!CL:0000763;4.79e-16;100!CL:0000775;6.69e-15;3!CL:0000767;3.44e-14;3!CL:0000226;1.03e-13;3!CL:0000842;1.03e-13;3!CL:0002087;8.57e-12;104!CL:0000738;6.82e-11;136!CL:0000771;1.14e-09;2!CL:0000988;6.55e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.19e-85,42;CL:0002057,1.19e-85,42;CL:0000766,1.86e-78,72;CL:0000473,4.58e-74,48;CL:0000234,4.58e-74,48;CL:0002009,8.82e-60,61;CL:0002194,7.62e-58,59;CL:0000576,7.62e-58,59;CL:0000040,7.62e-58,59;CL:0000559,7.62e-58,59;CL:0000557,7.20e-54,67;CL:0000763,8.77e-53,108;CL:0000049,8.77e-53,108;CL:0000839,4.59e-51,66;CL:0000738,2.33e-50,136;CL:0000037,3.46e-39,168;CL:0000988,9.11e-37,177;CL:0000094,2.43e-35,8;CL:0002087,4.28e-33,115;CL:0002032,8.81e-33,161;CL:0000837,8.81e-33,161;CL:0002031,4.13e-27,120;CL:0000081,2.44e-25,11;CL:0002393,1.47e-17,9;CL:0002397,1.47e-17,9;CL:0000775,6.56e-15,3;CL:0000767,3.16e-14,3;CL:0000134,4.89e-14,354;CL:0000226,1.08e-13,3;CL:0000842,1.08e-13,3;CL:0002320,1.36e-13,361;CL:0000219,5.00e-12,386;CL:0000048,6.37e-11,427;CL:0000723,1.21e-10,433;CL:0000034,2.75e-10,441;CL:0000771,1.01e-09,2 | |||
|ontology_enrichment_development_v019=CL:0002057;7.82e-59;42!CL:0000049;1.23e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.88e-60!102;UBERON:0003061!3.88e-60!102;UBERON:0002193!1.19e-55!112;UBERON:0002371!2.46e-53!80;UBERON:0001474!9.00e-49!86;UBERON:0004765!9.99e-40!101;UBERON:0001434!9.99e-40!101;UBERON:0002405!4.57e-35!115;UBERON:0003081!4.16e-23!216;UBERON:0002204!2.46e-20!167;UBERON:0002384!1.49e-13!375;UBERON:0000178!3.16e-12!15;UBERON:0000179!3.16e-12!15;UBERON:0000463!3.16e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.30e-09;15!UBERON:0000179;1.30e-09;15!UBERON:0000463;1.30e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.65e-51,98;UBERON:0003061,1.65e-51,98;UBERON:0002371,9.96e-47,76;UBERON:0002193,4.83e-46,108;UBERON:0001474,7.91e-43,82;UBERON:0004765,1.99e-38,90;UBERON:0002405,5.70e-37,93;UBERON:0001434,6.59e-34,100;UBERON:0003081,8.09e-21,203;UBERON:0002204,1.60e-17,167;UBERON:0002384,5.49e-13,371;UBERON:0000926,1.44e-10,315;UBERON:0004120,1.44e-10,315;UBERON:0006603,1.44e-10,315;UBERON:0000178,1.32e-09,15;UBERON:0000179,1.32e-09,15;UBERON:0000463,1.32e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,3.0706351847777,3.09632246632152,0,0,0,0,0,0,2.21598163412751,5.01361118675354,4.12320654360118,0,0,0,0.290796477559129,1.13362783106643,0.485168122375632,1.62700325833979,1.23350366406548,0.619412741790207,2.8769239232215,3.58624989140741,2.36482229888585,3.7922024881028,1.29096936716765,1.35426486594342,0.752969358170419,0.272906150057846,1.57306439111559,3.06083892370903,1.92557416245656,4.47535988059329,0,0.598390972864896,2.13112375266347,0.580418477257168,1.13477044938228,1.24564449799115,1.50749199154046,1.0429658368404,1.73751075764093,2.42159801053347,1.47311054395026,0.632924774881769,2.32380814943136,4.25208599930087,2.72556239160889,7.41368965566868,2.85336096398862,2.57160938715328,0.570025487482497,0.19891667719909,0.730656615058536,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,1.30139853857622,0,0,0,6.74106321552464,5.9832291840805,9.53155680902882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,3.01999881146064,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,1.23408681925858,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,3.0706351847777,3.09632246632152,0,0,0,0,0,0,2.21598163412751,5.01361118675354,4.12320654360118,0,0,0,0.290796477559129,1.13362783106643,0.485168122375632,1.62700325833979,1.23350366406548,0.619412741790207,2.8769239232215,3.58624989140741,2.36482229888585,3.7922024881028,1.29096936716765,1.35426486594342,0.752969358170419,0.272906150057846,1.57306439111559,3.06083892370903,1.92557416245656,4.47535988059329,0,0.598390972864896,2.13112375266347,0.580418477257168,1.13477044938228,1.24564449799115,1.50749199154046,1.0429658368404,1.73751075764093,2.42159801053347,1.47311054395026,0.632924774881769,2.32380814943136,4.25208599930087,2.72556239160889,7.41368965566868,2.85336096398862,2.57160938715328,0.570025487482497,0.19891667719909,0.730656615058536,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.301150238155546,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,1.30139853857622,0,0,0,6.74106321552464,5.9832291840805,9.53155680902882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,3.01999881146064,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0.238231775457789,1.23408681925858,1.29694662238543,1.62009431171434,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5748172408605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0.544017803369474,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:129848000..129848023,- | |||
}} | }} |
Latest revision as of 11:37, 23 July 2015
Short description: | p@chr10:129848000..129848023, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129848000..129848023, - |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.65e-51 | 98 |
blood island | 1.65e-51 | 98 |
bone marrow | 9.96e-47 | 76 |
hemolymphoid system | 4.83e-46 | 108 |
bone element | 7.91e-43 | 82 |
skeletal element | 1.99e-38 | 90 |
immune system | 5.70e-37 | 93 |
skeletal system | 6.59e-34 | 100 |
lateral plate mesoderm | 8.09e-21 | 203 |
musculoskeletal system | 1.60e-17 | 167 |
connective tissue | 5.49e-13 | 371 |
mesoderm | 1.44e-10 | 315 |
mesoderm-derived structure | 1.44e-10 | 315 |
presumptive mesoderm | 1.44e-10 | 315 |
blood | 1.32e-09 | 15 |
haemolymphatic fluid | 1.32e-09 | 15 |
organism substance | 1.32e-09 | 15 |