FFCP PHASE1:Hg19::chr11:112034761..112034772,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:112034761..112034772,- to FFCP PHASE1:Hg19::chr11:112034761..112034772,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3606 | |EntrezGene=3606 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5986 | |HGNC=5986 | ||
|TSSclassifier=strong | |||
|UniProt=Q6WWJ7 | |UniProt=Q6WWJ7 | ||
|association_with_transcript=24bp_to_ENST00000524595_5end | |||
|cluster_id=chr11:112034761..112034772,- | |||
|coexpression_cluster_id=C2095 | |||
|description=CAGE_peak_4_at_IL18_5end | |||
|id=chr11:112034761..112034772,- | |||
|ontology_enrichment_celltype=CL:0000066!1.59e-21!254;CL:0000557!4.88e-17!71;CL:0002009!4.78e-16!65;CL:0002076!1.37e-15!43;CL:0000839!2.29e-15!70;CL:0000766!2.88e-15!76;CL:0002194!6.51e-15!63;CL:0000576!6.51e-15!63;CL:0000040!6.51e-15!63;CL:0000559!6.51e-15!63;CL:0000223!7.31e-12!59;CL:0000860!3.93e-11!45;CL:0000763!5.62e-10!112;CL:0000049!5.62e-10!112;CL:0002057!2.19e-09!42;CL:0000077!4.33e-09!19;CL:0000076!6.51e-08!62;CL:0002368!1.85e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.24e-13;42!CL:0000473;1.03e-09;39!CL:0000234;1.03e-09;39!CL:0002368;2.68e-09;13!CL:0000077;5.65e-09;19!CL:0002251;2.16e-08;20!CL:0002202;2.44e-08;9!CL:0002632;2.44e-08;9!CL:0000860;1.87e-07;33!CL:0002057;1.87e-07;33!CL:0000235;9.01e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.13e-28,253;CL:0002076,3.60e-18,42;CL:0000223,3.49e-14,58;CL:0002009,2.79e-11,61;CL:0000076,4.15e-11,63;CL:0000473,5.13e-11,48;CL:0000234,5.13e-11,48;CL:0000557,2.13e-10,67;CL:0002194,5.55e-10,59;CL:0000576,5.55e-10,59;CL:0000040,5.55e-10,59;CL:0000559,5.55e-10,59;CL:0002368,2.91e-09,13;CL:0000077,6.18e-09,19;CL:0000839,6.54e-09,66;CL:0000766,1.06e-08,72;CL:0002251,1.97e-08,20;CL:0002202,2.88e-08,9;CL:0002632,2.88e-08,9;CL:0000860,2.27e-07,42;CL:0002057,2.27e-07,42;CL:0000235,9.34e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0008947;9.82e-10;29!CL:0000223;1.73e-07;58!UBERON:0006595;6.92e-07;86 | |||
|ontology_enrichment_disease=DOID:305!2.40e-17!106;DOID:0050687!7.97e-09!143;DOID:1749!2.92e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;3.83e-10;14!DOID:299;2.73e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.00e-23,106;DOID:0050687,9.10e-14,143;DOID:1749,2.40e-10,14;DOID:299,2.61e-08,25;DOID:162,1.10e-07,235;DOID:14566,3.76e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0000062!1.23e-18!511;UBERON:0004119!3.11e-13!169;UBERON:0000925!3.11e-13!169;UBERON:0006595!3.11e-13!169;UBERON:0002371!1.16e-12!80;UBERON:0000065!1.12e-11!53;UBERON:0001007!1.92e-11!155;UBERON:0001555!1.92e-11!155;UBERON:0007026!1.92e-11!155;UBERON:0001004!1.44e-10!72;UBERON:0004921!1.71e-10!129;UBERON:0004185!1.71e-10!129;UBERON:0001474!2.26e-10!86;UBERON:0008947!2.71e-10!38;UBERON:0003258!2.71e-10!38;UBERON:0002390!9.37e-10!102;UBERON:0003061!9.37e-10!102;UBERON:0002405!1.07e-09!115;UBERON:0000072!1.66e-09!46;UBERON:0002193!3.64e-09!112;UBERON:0000467!7.89e-09!625;UBERON:0004765!8.12e-09!101;UBERON:0001434!8.12e-09!101;UBERON:0000480!1.08e-08!626;UBERON:0005911!1.22e-08!82;UBERON:0001737!1.40e-08!9;UBERON:0002050!5.46e-08!605;UBERON:0005423!5.46e-08!605;UBERON:0001041!6.79e-08!98;UBERON:0000923!9.24e-08!604;UBERON:0005291!9.24e-08!604;UBERON:0006598!9.24e-08!604;UBERON:0002532!9.24e-08!604;UBERON:0000077!1.09e-07!130;UBERON:0000922!1.33e-07!612;UBERON:0001557!1.49e-07!19;UBERON:0000063!1.85e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.17e-12;9!UBERON:0001557;3.17e-12;9!UBERON:0000065;5.75e-11;44!UBERON:0000072;4.85e-10;37!UBERON:0005911;7.55e-08;36!UBERON:0000344;4.83e-07;20!UBERON:0001004;5.06e-07;65!UBERON:0004807;5.44e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.85e-18,160;UBERON:0000925,4.85e-18,160;UBERON:0006595,4.85e-18,160;UBERON:0001007,8.01e-16,145;UBERON:0001555,8.01e-16,145;UBERON:0007026,8.01e-16,145;UBERON:0004921,3.31e-14,118;UBERON:0008947,1.20e-13,38;UBERON:0003258,1.20e-13,38;UBERON:0000065,1.55e-13,54;UBERON:0001004,5.85e-13,74;UBERON:0001737,3.35e-12,9;UBERON:0000072,8.97e-12,47;UBERON:0001041,1.64e-10,87;UBERON:0001557,5.44e-09,19;UBERON:0002371,4.89e-08,76;UBERON:0005911,8.69e-08,82;UBERON:0002405,3.35e-07,93;UBERON:0004765,4.45e-07,90;UBERON:0000344,5.01e-07,20;UBERON:0001474,8.50e-07,82 | |||
|phase1_expression=0,0,0.140954404095971,0,0,1.74467704820074,0,0,0,5.40614660303319,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.251085279189606,0,0,0,0,0,0.154816123316076,10.1136334692682,4.819294700452,2.21852406100073,0,0,0,4.43196326825502,3.81034450193269,1.51907609501096,1.56740831967947,1.94336199611388,2.83333124397605,0.436194716338694,1.13362783106643,0.970336244751265,2.09186133215116,4.11167888021826,7.43295290148249,0.575384784644301,0,0.47296445977717,22.4084692478802,10.3277549373412,5.41705946377367,0.941211697713023,1.36453075028923,4.26974620445661,14.3859429414324,15.0836642725764,14.7047538933779,0.329851300186716,0,0,14.5104619314292,7.94339314567596,13.7020894779026,0.75374599577023,0.521482918420201,0.434377689410233,13.9241885605675,18.4138817993782,27.8486900947978,0,0,0.209658645508376,0,0,0.32145117339416,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68152568894461,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0.087834785693126,0.196468613246569,1.09288586487763,1.48313777113772,0.649094787309367,1.0447784237956,0.797747763113191,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,1.3082821564276,0,0,0,0,1.06400514659507,0.560677600142307,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0,0.211931901159562,0.300091096084402,0.206105058476878,0.515281080091258,0,0.168776332241266,0,0,0,0,0,0.201504196455281,0.339121184620975,13.7215205745941,10.3643525824517,17.2082757233402,0,0,0,0,0,0,0,0,0,0,0,15.0249636050602,11.9695129955452,12.2915625240576,12.3529249460281,14.3800433100988,15.8971314804435,13.2134681996961,13.1468381633982,11.5424147083917,0,0,0.4115740113314,0,0,0,0,0,9.34712132927663,0,2.41450627898976,2.24803506515239,4.2222168412885,1.48141512253647,0,0,0,0.34779121492523,0.234817388471643,0,0,0,0,0,2.70838706696137,5.85010662848094,6.8370334652815,5.62403003920662,2.35174979478403,3.54437743105966,3.58234090811393,0,0,21.1845192295256,0.704387472105808,0.414656231081544,0.864719720501769,0.75745460055828,0,0,0,0,0,0.901029173531752,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,6.93310567237048,6.10073421020206,12.6965698801212,6.08118903205952,3.01354254859276,4.21667878966063,0,0,0,0.144781306667579,0.61642896765115,0.358121926479791,0,0.197030760201927,0,0,0,0,0,0.167516265334349,0,0,2.99161459204025,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0.431428401637234,1.28073069364133,0,0,0,0,0,0,0.640695746278505,0,0,1.48418066444991,0,0,0.0821271560138091,0,0.116210378459959,3.14234568938218,5.41367469818869,0.184161977871793,0.574072240823034,0,0,0.451199612907412,0.462092022626489,0,0,1.05551628892876,0,0,0.215915916102139,0,0.541892875087706,0,2.03901018436031,0.831076008928724,0.671624264166535,0,0,1.53870075069834,13.1205858279882,3.25378394664303,1.54561517471583,0,0,6.3169209179579,4.55042172225565,0,0,0,0,0,0,0,0,0,2.97512847649761,2.11409074101617,2.55225424989168,0.6069466851333,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,4.61866141082458,3.35151137767894,2.17781969722645,1.88287601553558,3.01353760869861,3.36942951335251,1.33029046061003,3.67557440331135,1.01489521846434,0.764637207142375,0,0,0,0,0,0,0,0,6.86112604746889,0,0,0,0,0,0,2.11673582723883,0,0,0.684704037099577,0,2.50634477090067,0,0,0,0,0.687010689511529,0.307240764308458,0.223676107892416,0.834245708559542,0.19538809540204,0.556812347790485,0,0.270455678475983,0,0,3.92995134857262,0.586032717087576,0,0,1.42068073403207,0.95497793895076,0.296964680832639,0,0,0.281338832821026,0.556543525114529,0,0.844501632511974,0.597743964753209,4.42054264849836,0,0.20453736500431,0,0,18.8723537409386,11.9944187032658,0.511572370226872,0,0,0,0,0.278304294485554,0,0,0.0874599999961957,0,3.86897724170699,1.27126825146383,2.36387681767936,0,0,0,0.885741385813839,0.482385754501632,1.52581736317083,0,0.295547618953547,0.658156191461918,1.30726156222788,11.5721707751241,2.92410982314429,1.70913083770502,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0.189753732724185,0.158936578980379,5.4859496777287,5.06021705293358,2.26164914294305,0,1.99052386215701,2.65372693510018,1.83309043480088,0,0,0,0.202203398942031,0,0,0,6.26126780582687,0,0,1.20990716048664,0.30607276163049,1.13735843331278,0,0,0,0,0.313932918407225,0,1.13843818411917,0.693373365065693,4.33899345837827,3.72371110174635,1.48000651186684,0,0,10.4496837792212,11.5481120996173,11.5782794445025,11.5416929621219,0,0.451961481561065,0,0,0.0633107959558787,2.15106521008283,0.881747022766871,2.77488893161158,1.39866726707491,0.144090417154106,0,0,0,0.124252535565433,2.59263438078475,0.407712618220842,1.04602846312333,0,0,0,0.273810757783986,0,0,0,0.279282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| ||
|short_description=p4@IL18 | |||
}} | }} |
Latest revision as of 05:06, 25 September 2015
Short description: | p4@IL18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IL18_5end |
Coexpression cluster: | C2095_Mast_Retinal_CD14_bile_lung_cervical_Gingival |
Association with transcript: | 24bp_to_ENST00000524595_5end |
EntrezGene: | IL18 |
HGNC: | 5986 |
UniProt: | Q6WWJ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.13e-28 | 253 |
endo-epithelial cell | 3.60e-18 | 42 |
endodermal cell | 3.49e-14 | 58 |
macrophage dendritic cell progenitor | 2.79e-11 | 61 |
squamous epithelial cell | 4.15e-11 | 63 |
defensive cell | 5.13e-11 | 48 |
phagocyte | 5.13e-11 | 48 |
granulocyte monocyte progenitor cell | 2.13e-10 | 67 |
monopoietic cell | 5.55e-10 | 59 |
monocyte | 5.55e-10 | 59 |
monoblast | 5.55e-10 | 59 |
promonocyte | 5.55e-10 | 59 |
respiratory epithelial cell | 2.91e-09 | 13 |
mesothelial cell | 6.18e-09 | 19 |
myeloid lineage restricted progenitor cell | 6.54e-09 | 66 |
myeloid leukocyte | 1.06e-08 | 72 |
epithelial cell of alimentary canal | 1.97e-08 | 20 |
epithelial cell of tracheobronchial tree | 2.88e-08 | 9 |
epithelial cell of lower respiratory tract | 2.88e-08 | 9 |
classical monocyte | 2.27e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.27e-07 | 42 |
macrophage | 9.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.85e-18 | 160 |
endoderm | 4.85e-18 | 160 |
presumptive endoderm | 4.85e-18 | 160 |
digestive system | 8.01e-16 | 145 |
digestive tract | 8.01e-16 | 145 |
primitive gut | 8.01e-16 | 145 |
subdivision of digestive tract | 3.31e-14 | 118 |
respiratory primordium | 1.20e-13 | 38 |
endoderm of foregut | 1.20e-13 | 38 |
respiratory tract | 1.55e-13 | 54 |
respiratory system | 5.85e-13 | 74 |
larynx | 3.35e-12 | 9 |
segment of respiratory tract | 8.97e-12 | 47 |
foregut | 1.64e-10 | 87 |
upper respiratory tract | 5.44e-09 | 19 |
bone marrow | 4.89e-08 | 76 |
endo-epithelium | 8.69e-08 | 82 |
immune system | 3.35e-07 | 93 |
skeletal element | 4.45e-07 | 90 |
mucosa | 5.01e-07 | 20 |
bone element | 8.50e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.00e-23 | 106 |
cell type cancer | 9.10e-14 | 143 |
squamous cell carcinoma | 2.40e-10 | 14 |
adenocarcinoma | 2.61e-08 | 25 |
cancer | 1.10e-07 | 235 |
disease of cellular proliferation | 3.76e-07 | 239 |