FFCP PHASE1:Hg19::chr11:47279167..47279178,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:47279167..47279178,+ to FFCP PHASE1:Hg19::chr11:47279167..47279178,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10062 | |EntrezGene=10062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7966 | |HGNC=7966 | ||
|TSSclassifier=strong | |||
|UniProt=C9JTS4 | |UniProt=C9JTS4 | ||
|association_with_transcript=0bp_to_ENST00000457932_5end | |||
|cluster_id=chr11:47279167..47279178,+ | |||
|description=CAGE_peak_10_at_NR1H3_5end | |||
|id=chr11:47279167..47279178,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002367;3.44e-18;2!CL:0002599;5.78e-10;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002367,8.24e-18,2;CL:0002599,3.71e-10,1;CL:0000235,9.42e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.16e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!3.07e-11!155;UBERON:0001555!3.07e-11!155;UBERON:0007026!3.07e-11!155;UBERON:0004921!8.78e-11!129;UBERON:0004185!8.78e-11!129;UBERON:0004119!1.86e-09!169;UBERON:0000925!1.86e-09!169;UBERON:0006595!1.86e-09!169;UBERON:0000481!5.26e-09!347;UBERON:0000077!3.61e-08!130;UBERON:0003104!7.62e-07!238;UBERON:0009142!7.62e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;3.44e-18;2!UBERON:0003956;3.44e-18;2!UBERON:0001801;3.56e-10;14!UBERON:0001000;5.78e-10;1!UBERON:0005352;5.78e-10;1!UBERON:0000019;1.55e-07;19!UBERON:0000047;1.55e-07;19!UBERON:0004088;1.55e-07;19!UBERON:0010230;1.55e-07;19!UBERON:0000970;3.65e-07;20!UBERON:0002104;7.90e-07;21!UBERON:0001456;7.90e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,8.24e-18,2;UBERON:0003956,8.24e-18,2;UBERON:0001801,4.64e-10,14;UBERON:0001000,5.79e-10,1;UBERON:0005352,5.79e-10,1;UBERON:0000019,4.37e-07,20;UBERON:0000047,4.37e-07,20;UBERON:0010312,4.37e-07,20;UBERON:0004088,4.37e-07,20;UBERON:0010230,4.37e-07,20;UBERON:0003072,4.37e-07,20;UBERON:0004128,4.37e-07,20;UBERON:0003071,4.37e-07,20;UBERON:0000970,9.38e-07,21;UBERON:0002104,9.38e-07,21 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0.252433774244115,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0.337169380156203,0.482022059766964,0.330881918197182,0,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,6.33775174109154,0.982827216677626,0.590789906681404,0,0.245976877086227,0.171567810298526,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0.951270761172991,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,1.58390374586686,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.207970861530807,0,0,0,0.601892199455438,2.27407504055985,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.274537029736055,0.235624804691373,0,0,0,1.46290121726877,0,0,0,0.141405431953713,0,0,0,0,1.15755106853338,0,0,0,0,0,0.294747123039363,0,0,0.211107635297664,0,1.13841952129715,1.04980416073495,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.667396566847634,0,0,0,0,0,0,0.935702702041099,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0,0.384751292518985,0,0.69169171316418,0.179515288819544,0.108647371922008,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.06149077404007,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,1.18375320854817,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,1.16107597546902,1.09633975629278,1.31384731285135,0.484945082442097,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0.144090417154106,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.669514372325618,0.0671834724867263,0,0,0.236349546921671,0,0.26961417541674,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,2.34483573884932,0,0,0.26446520348538,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.426766918776564,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0.781514011233092,0.261906694481422,0,0.295712172434091,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.39246546425257,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0.609589624911347,0,0.205325613712494,0,0,0,0,0,0,0,0,1.62065732026684,0.874238242015829,0,0.245148321753905,0,0.392616934229891,0,0,0,0.187967835959707,0,0,0,0,0.0802413666891683,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0.12729431655633,0,0.217716747896961,0,0.202056159043763,0,0,0,0,0,0.0898252021065869,2.34640942403454,0,0.406896178315738,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419317291016752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326923806226917,0,0,0.468642863667593,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0,0.309977343527296,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0.300091096084402,0,0,0.18611685633159,0,0,0.252433774244115,0.276149695926898,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0.337169380156203,0.482022059766964,0.330881918197182,0,0.474541238222193,0.269662616320329,0.196221465125346,0.38474715694639,0,0,0,0,6.33775174109154,0.982827216677626,0.590789906681404,0,0.245976877086227,0.171567810298526,0,0,0,0,0,2.07986957055916,0,0,0,0,0,0.951270761172991,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0.112131084345361,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0.65147236858747,0,1.58390374586686,0,0,0,1.2162378064119,1.50677127429638,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.207970861530807,0,0,0,0.601892199455438,2.27407504055985,0,0,0,0,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0.114814448164607,0.364182336013434,0,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0.193341436584244,0,0.307007349452259,0.137836572484531,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0,0,0.190630193923825,0,0.42793898803392,0,0,0,0.274537029736055,0.235624804691373,0,0,0,1.46290121726877,0,0,0,0.141405431953713,0,0,0,0,1.15755106853338,0,0,0,0,0,0.294747123039363,0,0,0.211107635297664,0,1.13841952129715,1.04980416073495,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.667396566847634,0,0,0,0,0,0,0.935702702041099,0.293016358543788,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0,0.21787692703798,0,0.384751292518985,0,0.69169171316418,0.179515288819544,0.108647371922008,0,0.0915975934018623,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,1.06149077404007,1.22206028986725,0,0,0,0.067401132980677,0,0,0,0,0,1.18375320854817,2.41981432097328,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,1.16107597546902,1.09633975629278,1.31384731285135,0.484945082442097,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0.144090417154106,0,0,0.14405479798815,0,0.471388069233591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.669514372325618,0.0671834724867263,0,0,0.236349546921671,0,0.26961417541674,0.196854963029498,0,0,0,0,0.137539436597234,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,2.34483573884932,0,0,0.26446520348538,0.171086837884329,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453411851024545,0,0,0,0,0,0,0,0.168942440653073,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0.426766918776564,0,0,0,0,0,0,0,0.157265941855896,0,0.169732529954025,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0.0752103283492573,0,0.781514011233092,0.261906694481422,0,0.295712172434091,0,0,0,0.0634158101939068,0,0.548257766857182,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0.39246546425257,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0.111855431797792,0,0.609589624911347,0,0.205325613712494,0,0,0,0,0,0,0,0,1.62065732026684,0.874238242015829,0,0.245148321753905,0,0.392616934229891,0,0,0,0.187967835959707,0,0,0,0,0.0802413666891683,0.730336388246517,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0.12729431655633,0,0.217716747896961,0,0.202056159043763,0,0,0,0,0,0.0898252021065869,2.34640942403454,0,0.406896178315738,0.665756774185513,0.201273793591026,0 | ||
|short_description=p10@NR1H3 | |||
}} | }} |
Latest revision as of 04:12, 18 September 2015
Short description: | p10@NR1H3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_NR1H3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457932_5end |
EntrezGene: | NR1H3 |
HGNC: | 7966 |
UniProt: | C9JTS4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trabecular meshwork cell | 8.24e-18 | 2 |
smooth muscle cell of the esophagus | 3.71e-10 | 1 |
macrophage | 9.42e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 8.24e-18 | 2 |
aqueous drainage system | 8.24e-18 | 2 |
anterior segment of eyeball | 4.64e-10 | 14 |
vas deferens | 5.79e-10 | 1 |
spermatic cord | 5.79e-10 | 1 |
camera-type eye | 4.37e-07 | 20 |
simple eye | 4.37e-07 | 20 |
immature eye | 4.37e-07 | 20 |
ocular region | 4.37e-07 | 20 |
eyeball of camera-type eye | 4.37e-07 | 20 |
optic cup | 4.37e-07 | 20 |
optic vesicle | 4.37e-07 | 20 |
eye primordium | 4.37e-07 | 20 |
eye | 9.38e-07 | 21 |
visual system | 9.38e-07 | 21 |